ID EU685321; SV 1; circular; genomic DNA; STD; VRL; 2800 BP. XX AC EU685321; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE East African cassava mosaic Cameroon virus isolate EACMCV-CM[NG:Ll:06] DE segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-2800 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (05-APR-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; 1d0d602c6ef07ee7c875ff049d0e870d. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="East African cassava mosaic Cameroon virus" FT /segment="DNA-A" FT /host="Leucaena leucocephala" FT /isolate="EACMCV-CM[NG:Ll:06]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:223262" FT gene 173..520 FT /gene="AV2" FT CDS 173..520 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B8QSD0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8QSD0" FT /protein_id="ACF42157.1" FT /translation="MWNPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYGEATRRYNNLNTRIQGAEEAELRQPIHEPCGCPYCPRHQKQNMGQQAHVS FT EAQDVQDVSKP" FT gene 333..1109 FT /gene="AV1" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B8QSD1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8QSD1" FT /protein_id="ACF42153.1" FT /translation="MAKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSEVTRGPGLTHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDYRDRFQVLRKFHATVVGGPSGMKEQALVKRFFRINNHIVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(363..734) FT /gene="AC5_4" FT CDS complement(363..734) FT /codon_start=1 FT /gene="AC5_4" FT /product="unknown" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B8QSD2" FT /protein_id="ACF42156.1" FT /translation="MVRMILLLDILIHPDLAQYIYGLDTKPLSDSVCQPRPTRNFTDTS FT DYTSMLNIISLFIRLNLTWAFTALRDVRASIHPVHLGLPIHGPVGPYFASGDADSRGNH FT TVRVWAVEVQPPPHLGYGC" FT gene complement(1103..1507) FT /gene="AC3" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSD3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSD3" FT /protein_id="ACF42155.1" FT /translation="MDLRTGDDIGALQWRNGAFIWEIPNPLYFTILNHDSMPFNMNHDI FT IDVQIRFNYNLRKALGMHKCFLNFRIWTRLHPQTWRFFKTFRTQVMKYLTNLGVISIST FT VIDAVHHVLNIVFVGTLSVSQDHAIKFNIY" FT gene complement(1248..1655) FT /gene="AC2" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSD4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSD4" FT /protein_id="ACF42154.1" FT /translation="MRSSSPSQSHSSPPPIKARHRPAKVRAPRRRRIDLTCGCSIYRSI FT NCHNHGFTHRGRHWCSSMEEWRLYLGDSKSPIFHNPQPRQHAVQHESRHNRCPDSVQLQ FT PEESTGDAQVFSQLPDLDSFTSSDLAFLQNL" FT gene complement(1585..2643) FT /gene="AC1" FT CDS complement(1585..2643) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSD5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSD5" FT /protein_id="ACF42152.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLAKDEALSQLKALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLLSPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEEIEVWVSENICRPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDKNSNLKNWAIKNALFISLTEPL FT FSSTDQSQAQAS" FT gene complement(2510..2788) FT /gene="AC4" FT CDS complement(2510..2788) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="host activation protein" FT /db_xref="UniProtKB/TrEMBL:B8QSD6" FT /protein_id="ACF42158.1" FT /translation="MAANIRNSNFEWKSTYLHICHWGTSYILPPIPPFPWSFECPPIQN FT DSQYAESRSFSNKCQKLFHNLSPMLLSKGRGPFPIKSPFLPDEYQIH" XX SQ Sequence 2800 BP; 758 A; 552 C; 716 G; 774 T; 0 other; accggatggc cgcgcccgaa gaaagcaggt gggccctatg atagtccgtg tccgcaaaag 60 aaagtggacc ccgcgcacgc atgttggtcg gccaataata ttggcgcctc gaaggctaga 120 tattgagttt tgactttata tacttcgtca cgaagtagtt gagcgcgtca aaatgtggaa 180 tccgttagtt aacgattttc cggaaaccgt tcacggtttc cgttcgatgc ttgctgttaa 240 atacctgtta catctggaac aggaatatga tcgcggtact gtcggggctg agtatatacg 300 tgatctaata ggggtgctac ggtgtaagag ttatggcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgtggttgc ccctactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtac aggatgtatc gaagccctga cgtccctaag ggctgtgaag 540 gcccatgtaa ggttcagtct tatgaacaga gagatgatgt taagcatact ggtatagtcc 600 gatgtgtcag tgaagttacg cgtgggcctg ggctgacaca cagagtcgga aagaggtttt 660 gtatcaagtc catatatata ttgggcaaga tctggatgga tgagaatatc aagaagcaaa 720 atcatacgaa ccatgttatg ttttttctcg tgcgagatag aaggccttat gggccgagtc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctacgact gcaactgtga 840 agaatgatta tagggaccgg tttcaggtgt tacgtaaatt ccatgcgact gtagttggtg 900 gaccctcagg gatgaaggaa caagctttgg ttaagaggtt ttttaggatc aataatcata 960 tagtgtataa tcatcaggaa caggccaagt atgagaatca taccgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcaaatc ctgtgtacgc tacgcttaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa tattaaattt gattgcatga tcttgggata 1140 cagatagggt gcccacaaaa actatattta atacatgatg cactgcatct attacagttg 1200 aaatcgaaat aacacctaaa ttagtgagat atttcatgac ttgtgtccta aaggttttga 1260 agaaacgcca agtctgagga tgtaaacgag tccagatccg gaagttgaga aaacacttgt 1320 gcatccccag tgctttcctc aggttgtagt tgaaccgaat ctggacatct attatgtcgt 1380 gattcatgtt gaacggcatg ctgtcgtggt tgaggattgt gaaatatagg ggatttggaa 1440 tctcccagat aaaggcgcca ttcctccatt gaagagcacc aatgtcgtcc cctgtgcgta 1500 aatccatggt tgtgacaatt aatgctgcga tagatggaac agccacaagt taggtcgatg 1560 cgtcgacgtc taggtgctct gaccttagct ggcctgtgcc tggctttgat cggtggagga 1620 gaagagtggc tctgtgaggg agatgaagag cgcattcttg atcgcccaat tcttgagatt 1680 ggaattcttg tcctcgtcta ggtattcttt ataggacgaa ttggggcccg gattgcataa 1740 gaagatggtg ggaatcccac ctttaatttg aatgggcttt ccgtattttg tgtttgattg 1800 ccaatctcgc tgggccccca tgaactcttt aaaatgcttt agataatgcg ggtctacgtc 1860 gtcaatgacg ttgtaccatg cgtcgtttga atatatcttg ggagacagat ccaggtgtcc 1920 acatagatag ttatgtgggc ccagagatcg ggcccacatc gtcttcccgg ttcggctatc 1980 accttcgaga acaatactga tcggtctcca tggccgcgca gcgggacggc atatattttc 2040 ggatacccat acttctattt cctctgggac ttgcgtaaat gaggatgata agaacggact 2100 aacgtaagtt tgtggcggag cctggaagat tcgatccgcg ttagcagata tgttatggaa 2160 ctgtaaaaaa aaggactttg gatccttttc tttgataatt tgaagagctt ctgatttaga 2220 agaagcattc aacgcctctg catatacctg agctaaatgc tggccctccc ccctggcact 2280 tctggcatcg acttggaaaa ttccatcgtc aagaaattcc cctccctttt caatgtaagc 2340 cttgacatcg gacgatgatt tagctccctg aatgttcgga tggaaatgtg ttgatcggga 2400 tggggaaagg agatcgaaga atcgggggtt ggtacattgg aacttgcctt cgaattggat 2460 gagaacatgg agatgaggca ccccatcctg atgtagttct ctgcaaaccc taatgaattt 2520 gatattcgtc gggtaagaaa gggcttttaa ttgggaaagg gcctcgtcct ttgctaagga 2580 gcatcgggga taggttatga aataattttt ggcatttatt tgaaaacgac cggctctcgg 2640 catattggct gtcgttttgt atcgggggac actcaaaact ccaggggaac ggtggaatgg 2700 ggggcaatat atatgatgtc ccccaatggc atatgtgtaa ataggtagac ttccattcaa 2760 aatttgaatt gcgaatattg gcggccatcc gattaatatt 2800 //