ID   EU684142; SV 1; linear; genomic RNA; STD; VRL; 1779 BP.
XX
AC   EU684142;
XX
DT   22-JUL-2008 (Rel. 96, Created)
DT   22-JUL-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Nemesia ring necrosis virus strain WA replicase-associated protein RP gene,
DE   partial cds; and coat protein CP gene, complete cds.
XX
KW   .
XX
OS   Nemesia ring necrosis virus
OC   Viruses; Riboviria; Tymovirales; Tymoviridae; Tymovirus.
XX
RN   [1]
RP   1-1779
RX   DOI; 10.1007/s00705-008-0149-z.
RX   PUBMED; 18600295.
RA   Segwagwe A.T., Putnam M.L., Druffel K.L., Pappu H.R., Eastwell K.C.;
RT   "Molecular characterization of a new tymovirus from Diascia ornamental
RT   plants";
RL   Arch. Virol. 153(8):1495-1503(2008).
XX
RN   [2]
RP   1-1779
RA   Eastwell K.C., Segwagwe A.T., Druffel K.L., Pappu H.R.;
RT   ;
RL   Submitted (30-APR-2008) to the INSDC.
RL   Department of Plant Pathology, Washington State University, 24106 North
RL   Bunn Road, Prosser, WA 99350, USA
XX
DR   MD5; 94133df7cadd60703102a5bc5132fda9.
DR   RFAM; RF01072; TMV_UPD-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1779
FT                   /organism="Nemesia ring necrosis virus"
FT                   /host="Diascia hybrid cultivar"
FT                   /strain="WA"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Apr-2002"
FT                   /db_xref="taxon:312009"
FT   CDS             <1..1035
FT                   /codon_start=1
FT                   /product="replicase-associated protein RP"
FT                   /db_xref="GOA:B4YUL8"
FT                   /db_xref="InterPro:IPR001788"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B4YUL8"
FT                   /protein_id="ACF40328.1"
FT                   /translation="AQHKVNDGSIFGSWKACQTLALMHDYVIMTLGPVKKYQRILDHND
FT                   RPRHIYTHCGKTPSQLASWCQEFACEGLSLCNDYTSFDQSQHGEAVVLECLKMRRCSIP
FT                   DSLIQLHLHLKTNISTQFGPLTCMRLTGEPGTYDDNTDYNLAVIYSQYQMGSTACMVSG
FT                   DDSVIFSSPPTHPSWAAVKDLLHLRFKTESTFQPLFCGYYVGPHGCCRNPYALFAKLMI
FT                   STDKGNISDTLPSYLYEYSIGHRLGDACLDLVPDHLHSYLSACFDFFCRKASPLQKTLL
FT                   SFDEPSPSVLKKLASSSAWASSPLLAELDDQSLQALLARSNLPSSHLDARVQRLESELL
FT                   HSFQ"
FT   CDS             1037..1615
FT                   /codon_start=1
FT                   /product="coat protein CP"
FT                   /db_xref="GOA:B4YUL9"
FT                   /db_xref="InterPro:IPR000574"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B4YUL9"
FT                   /protein_id="ACF40329.1"
FT                   /translation="MEELKPVSVKQPSIPAPGTKLPPAPGQQSSAIVQPFQISVTDLGV
FT                   AEVNVQITLSSDPTLSQLTAFYRHADLVECSAVLFPNFTSSSNPTHCDLAWVPANSTAS
FT                   PKAILRTYGGNRFTLGGPITANEVISIPLPMNSVNCTIKDSVMYTDSPRLLAYSPAPLT
FT                   AKTTPSGTLVIRGKVRLSSPLLQPLTASS"
FT   3'UTR           1616..1779
XX
SQ   Sequence 1779 BP; 361 A; 662 C; 345 G; 411 T; 0 other;
     gctcagcaca aggtcaatga cggctccatc ttcggatcct ggaaagcctg ccagactctc        60
     gcactcatgc atgactatgt catcatgact ctgggcccgg tgaagaagta ccagcgcatt       120
     ctcgaccaca acgatcgacc ccggcacatt tacacccact gcggcaaaac cccttctcaa       180
     ctagcttctt ggtgtcagga gttcgcctgc gaaggccttt ccctgtgcaa tgactacacg       240
     tctttcgacc aaagtcaaca cggcgaagcc gtcgtgctag agtgtctcaa gatgcgtcgc       300
     tgcagcatcc cggattcctt gatccaactc cacttgcacc tcaaaaccaa catctccacc       360
     cagttcggac ccctcacatg catgcgcctc actggcgaac caggcactta cgacgacaac       420
     acggattaca atctggctgt catctactcc cagtaccaaa tgggttccac cgcctgcatg       480
     gtgtcgggag acgattccgt catcttttcc tcgcccccaa cccatcccag ctgggcggcc       540
     gtcaaagacc tcctccatct ccgtttcaaa actgagtcca ctttccagcc cctcttctgc       600
     ggctactacg tcggccccca cgggtgctgc cgcaacccct acgccttgtt cgcaaaactg       660
     atgatctcca cggacaaagg caacatttcc gacacactcc cttcctacct ttacgagtac       720
     tccataggcc atcgccttgg cgacgcctgc ctcgatctcg tgcccgacca tctccactcc       780
     tacctcagcg cctgctttga cttcttctgc cggaaagcct cgcccctgca gaagactctc       840
     ctcagcttcg acgagccttc cccgtctgtg ctcaagaagc tggcgtcctc ttcagcttgg       900
     gcctctagcc ccctcctggc tgaactcgac gaccagtcac ttcaggcact tcttgcccga       960
     tccaatctgc caagctccca cctcgacgcc agggttcaaa ggcttgagtc tgaattgctt      1020
     cactcatttc aataacatgg aagaactcaa acctgtcagc gtcaaacagc cctctattcc      1080
     cgctcccggc accaagcttc ctcctgcacc gggtcagcaa tcatccgcca tcgttcaacc      1140
     cttccagatc tccgtcaccg acctcggcgt cgccgaagtc aacgttcaga tcaccctctc      1200
     ctcggacccc actctctctc agctcacagc tttctaccgt catgctgacc tcgtggaatg      1260
     ctccgctgta ctcttcccaa acttcacctc ttcatccaac cccactcact gtgatctcgc      1320
     ctgggttccc gccaattcca ccgcgtcacc caaggcaatc cttcgaacct acggtggcaa      1380
     tcgcttcacc ctcggaggcc ccatcaccgc gaacgaggtg atctccattc ctctgcccat      1440
     gaactctgtc aactgcacca tcaaagacag cgtcatgtac accgactcac cccgtcttct      1500
     agcctactct ccggcccctc tcacggccaa aaccacccct tccggcactc ttgtcattcg      1560
     tggcaaggtc cgtctctctt cccccctcct ccagcctctc acagcttcct cgtgagggtg      1620
     gcgcacacca tagtgcgtag tgtttcggct tccacttaaa tcgaaagcca acccctccag      1680
     ttttctggtt gttcctcgga tcgctacgtc caccagattt gtgtaatctg gccgttagga      1740
     acttaaaatt gcgcggagtt cgaatctccc cctgtcccg                             1779
//