ID EU665000; SV 1; linear; genomic RNA; STD; VRL; 3394 BP. XX AC EU665000; XX DT 17-MAY-2008 (Rel. 95, Created) DT 17-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Cucumber mosaic virus from China segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3394 RA Li J., Zhang F.; RT "The complete sequence of Cucumber mosaic virus RNA1 isolated from Tagetes RT erecta in China"; RL Unpublished. XX RN [2] RP 1-3394 RA Li J., Zhang F.; RT ; RL Submitted (21-APR-2008) to the INSDC. RL Biology, Capital Normal University, Xisanhuanbeilu 105, Beijing, Beijing RL 100037, China XX DR MD5; e1d8d249df461914d77672ff46e75209. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3394 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Tagetes erecta" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT gene 96..3077 FT /gene="1a" FT CDS 96..3077 FT /codon_start=1 FT /gene="1a" FT /product="1a protein" FT /db_xref="GOA:B2ZHC3" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B2ZHC3" FT /protein_id="ACD39406.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGL FT KVYIRNVLDVKDSEVIRTRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPRSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMSMRKVILNDPQQFDGRQ FT PDFCTKSAAECKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GFIPELKCQWRKIKSAFSEEEDATCLAAKLNSTVFSRVRNGKTLIAFDFVEESTMSYVH FT DWDNIKSFMTDQTYSFNGMTYGIERCVIYAGVMTYKIVGVPGMCPPELIRHCIWFPSMK FT DYVGLKIPASDDLVKWKTVRILLSTLRETEEIAMRCYNDKKNWMDQFKIILGVLSSKSS FT TIVINGMSMQSGERIDLNDYHYIGFAILLHTKLKYEQLGKMYDMWNASFIWKWFASMSR FT PFRVFFSTVVKTLFPTLRPREEKEFLVKLSTFVTFNEECSFDGGKEWDVISSAAFVAAQ FT AVADGTILAEEKAKKLADRLAVPVEEEVSAIPEVSPTPADQGNACGLETETSELDSLSA FT QTRSPITRIAERATAMLEYSAYEKQLHDTTVSNLQRIWCMAGGDNKRNSLESNLKFVFD FT TYFSVDALVNVHFPTGRWMHPVPEGVVYSVGYNEKGLGPKLDSELYIVNGDCVISNSHD FT LFSITKSLLAPTGTISQVDGVAGCGKTTAIKSMFNPSTDIIVTANKKSAQDVRYALFKS FT TDSKEACAFVRTADSILLNDCPTVSRVLVDEVVLLHFGQLCAVMSKLHAVRALCFGDSE FT QIAFSSRDASFDMRFSKLIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRTKYSKW FT VSQSKVRKSVTSRAVASVSLVELDPTRFYITMTQADKASLITRAKELNLPKAFYTDRIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVAVTRHKVTFRYEYCGVLGGDLIASC FT IPLV" XX SQ Sequence 3394 BP; 868 A; 741 C; 781 G; 1004 T; 0 other; gttttattta caagagcgta cggttcaacc cctgcctccc ctgtaaaact accctttgaa 60 ttcttcttct taacttttct tagtttaaaa ttcctatggc gacgtcctca ttcaacatca 120 atgaactggt agcctcccac ggcgataaag gactactcgc gacagccctc gttgataaaa 180 cagctcatga acagctggag gagcaacttc aacatcaacg tagaggcctt aaggtctaca 240 tccgtaatgt tttggatgta aaggactccg aagtcattcg gactcggtat ggtggtaagt 300 acgacctcca tctcacccag caggaattag ctccccatgg cctcgctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactttt tccctcgttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac actatcttcg cggacacaac gtacattgct 480 gctccccatg tttgggtatt cgtgacaaga tgcgtcacac cgaaagatta atgagcatgc 540 gcaaggtcat tttaaacgat ccacaacagt ttgatggccg ccagccggac ttttgcacta 600 agtctgcagc tgaatgcaaa gttcaagccc actttgctat ttctatacac ggaggatatg 660 atatgggctt tagaggttta tgtgaggcaa tgaacgctca cggaactacg attttgaaag 720 ggacgatgat gttcgacggt gctatgatgt ttgacgacca aggctttatt cctgaactta 780 aatgtcagtg gcgaaaaatc aaatccgcct tttctgagga ggaggatgcc acttgtttag 840 cagctaaact caattctact gtattctcac gcgtgcgcaa cgggaaaacc ttaatcgcgt 900 ttgacttcgt tgaggaatcc acgatgtctt atgttcacga ttgggataat ataaaatcgt 960 ttatgacaga tcaaacgtac tctttcaatg gtatgaccta tggaattgag cgttgtgtta 1020 tttacgctgg cgtgatgact tacaagattg ttggtgtgcc tgggatgtgt ccaccggaac 1080 tcattcgaca ttgtatctgg ttcccctcta tgaaggacta tgttggtctt aagattcccg 1140 cgtctgatga cttggttaaa tggaaaacag tccgtatttt attgtcaaca ctacgtgaga 1200 ctgaggaaat agctatgcgt tgttataacg acaagaagaa ttggatggat caattcaaga 1260 ttattctcgg tgttttatca tcgaaatcct ccacgatcgt tatcaatggt atgtctatgc 1320 agtccggtga acgtattgat ctcaacgact atcattacat cgggtttgct attcttcttc 1380 acacgaaatt aaaatacgaa caacttggaa aaatgtacga tatgtggaat gcttccttta 1440 tttggaagtg gtttgcgtct atgtccagac cattccgtgt tttcttttcc actgttgtta 1500 agactttgtt tccgactttg agaccgcgcg aggaaaagga gtttttggtc aaactttcca 1560 ctttcgtcac ctttaacgag gagtgctctt ttgacggagg gaaagaatgg gacgtgatat 1620 catcagcggc ttttgtagcc gctcaggctg ttgcagatgg taccattttg gccgaggaga 1680 aagctaagaa attagctgat cgtctggccg tgcctgttga agaagaagta tctgctattc 1740 ctgaggtgtc tcctacacct gctgatcagg gcaatgcttg tggactagaa acagaaacat 1800 cggaactgga ttctttgtct gcccaaacac gttcccccat cacacggatc gctgaaagag 1860 cgaccgctat gcttgaatat tcagcttatg agaaacaatt gcacgatacc accgtttcaa 1920 atcttcaacg aatttggtgc atggcaggtg gcgacaacaa gagaaactct ttagagagta 1980 atttgaaatt tgtgtttgac acttattttt ctgttgacgc ccttgtgaat gttcactttc 2040 ctactgggag gtggatgcac cctgtacctg agggcgtggt atactctgtt ggttataatg 2100 agaagggtct cggtcctaaa cttgacagtg agttgtacat agttaatggt gattgtgtga 2160 tttcgaacag tcacgatctg ttttcgatca ctaaatcttt gttagctccc accggaacca 2220 tcagtcaagt cgatggtgtg gctgggtgcg gaaaaaccac tgctataaaa tccatgttta 2280 atccttccac agatataatt gtcacagcca acaagaaatc tgctcaagat gtgcgttatg 2340 cgctgtttaa atctactgac tccaaagaag cttgtgcttt tgttaggacc gctgattcca 2400 tattactcaa tgactgccct acggtgtctc gagtgcttgt ggatgaagtc gttttgttgc 2460 actttggtca gttgtgcgct gtcatgtcga aacttcatgc tgtcagagct ttgtgtttcg 2520 gagattccga acagatagcc ttttcttctc gtgacgcttc gttcgacatg cgtttctcta 2580 agcttattcc ggatgagacc agtgatgcgg acacaacttt ccgtagccca caagatgtag 2640 taccacttgt gcgtctgatg gctacgaagg ctctaccgaa aggaacccgt acgaaatact 2700 caaaatgggt gtcccaatct aaagtgagga agtctgttac ttcgcgtgct gttgctagtg 2760 tatctctagt tgaactggac cccaccagat tctatattac gatgacgcaa gctgataaag 2820 cctcactaat cactagagct aaggaattga acctacccaa ggcattctac actgatagga 2880 taaagactgt ccatgaatct caaggcattt cagaagatca tgtgaccctt gttaggttga 2940 agagtactaa atgtgacctg ttcaagaaat tttcctactg cttagttgca gttactcgac 3000 ataaggtcac cttccgctat gagtactgtg gtgtgttagg tggggaccta atcgctagtt 3060 gtattccgtt agtctgaacg cggaaggtcc gaagacgtta aactacactc tctttattgc 3120 gagtgctgag ttggtagttt tgctttaaac tatctgaagt cgctaaatcc aatattggtt 3180 gcgaacgggt tgtccatcca gcttacggct aaaatggtca gtcatgcccc aaaggcatgc 3240 cgacgcctta caaggttgtc gaggtaccct tgaaatcatc tcctagattt cttcggaaga 3300 gcttcgtgag aagctcgtgc acggtaatac actgatatta ccaagagtgc gggtatcgcc 3360 tgtggttttc cacaggttct ccataaggag acca 3394 //