ID   EU647735; SV 1; linear; mRNA; STD; VRL; 613 BP.
XX
AC   EU647735;
XX
DT   03-MAY-2010 (Rel. 104, Created)
DT   03-MAY-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Sugarcane yellow leaf virus isolate CBD1135 putative aphid transmission
DE   factor mRNA, partial cds; and capsid protein and movement protein mRNAs,
DE   complete cds.
XX
KW   .
XX
OS   Sugarcane yellow leaf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-613
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   "Sugarcane yellow leaf virus causing yellow leaf disease in India:
RT   Molecular characterization and identification of three genotypes";
RL   Unpublished.
XX
RN   [2]
RP   1-613
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   ;
RL   Submitted (10-APR-2008) to the INSDC.
RL   Plant Pathology, Sugarcane Breeding Institute, Sugarcane Main Road,
RL   Sugarcane, Coimbatore, Tamil Nadu 641 007, India
XX
DR   MD5; 3e429e3f6a7331ffa4eeeecb5950319d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..613
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum sp. hybrid cv. D1135"
FT                   /isolate="CBD1135"
FT                   /mol_type="mRNA"
FT                   /country="India"
FT                   /collection_date="05-Dec-2007"
FT                   /db_xref="taxon:94290"
FT   CDS             1..>613
FT                   /codon_start=1
FT                   /transl_except=(pos:589..591,aa:OTHER)
FT                   /product="putative aphid transmission factor"
FT                   /note="ORF5; readthrough protein"
FT                   /db_xref="GOA:D6BJI6"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D6BJI6"
FT                   /protein_id="ACH42765.1"
FT                   /translation="MNTGANRSRRNVRRRANRRRQTRPVVVVRPAAGLRRVRRRRARVG
FT                   GDAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPKXVSDASPT"
FT   CDS             1..591
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:D6BJI7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D6BJI7"
FT                   /protein_id="ACH42763.1"
FT                   /translation="MNTGANRSRRNVRRRANRRRQTRPVVVVRPAAGLRRVRRRRARVG
FT                   GDAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPK"
FT   CDS             32..484
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q91L36"
FT                   /protein_id="ACH42764.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISRPTQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSLFSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLLASPSRGTPRKPSRPPSSGGKTS"
XX
SQ   Sequence 613 BP; 176 A; 167 C; 145 G; 125 T; 0 other;
     atgaatacgg gcgctaaccg ctcacgaagg aatgtcagaa gacgcgctaa ccgtcgtcga        60
     cagactcggc cagtggtcgt ggtccggcct gccgcaggac ttagacgagt acgacgacgt       120
     agagcacgtg ttggaggaga cgctgtgcga ggaccgggag gaagaagcaa cagggatgtt       180
     ctcactttca cgattgacga tctcaaggcc aactcaaccg ggatcctcaa attcggaccg       240
     aacttatctc agtacgcagc gttcaacaat ggcttactca aagcctacca tgagtataaa       300
     atcacaagtc tcactattca gtataactca tgctcctccg acgcaactcc aggtgcaatc       360
     gcacttgaag tggatacatc ctgctcccaa acaacaacag gctccaagat tactagcttc       420
     cccgtcaaga ggaacgccaa gaaaaccttc ccggccccct tcatcagggg gaaagacttc       480
     atgactacat cagctgatca attttggctt ttgtacaaag ggaatggaga cggaagccta       540
     gcaggacaat tcgtctgccg atttgaatgt ttattccaga atcccaaata ggtaagcgac       600
     gcttccccaa cac                                                          613
//