ID EU628643; SV 1; circular; genomic DNA; STD; VRL; 2688 BP. XX AC EU628643; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-K_Ug-BusD-2005, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2688 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2688 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 52f464956adb4546253ba45c8990e061. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2688 FT /organism="Maize streak virus" FT /host="Eustachys petraea" FT /isolate="MSV-K_Ug-BusD-2005" FT /mol_type="genomic DNA" FT /country="Uganda" FT /lat_lon="0.46 N 30.41 E" FT /collection_date="2005" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZV0" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZV0" FT /protein_id="ACF40568.1" FT /translation="MDPQSAIYTLPRVPTAAPTTGGWSWSHVGEVAILSFVALICIYLL FT YLWVLRDLILVLKARRGRSTEELIFGSEAVDRRNPIPNTLEPTAPVHPGPFVPGQG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZN8" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZN8" FT /protein_id="ACF40569.1" FT /translation="MSTSKRKRADEAQWNQRSTKKKASAPKAKKAGGKGEKPSLQIQTL FT LHSGDTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKVGVDYHFVADAASCKYSNR FT GTGVMWLVYDTTPGGNAPTTKDIFAYSDALKAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDTPPSNASWPPCKRNVDFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYLVIAP FT GNGITFTAHGQTRLYFKSVGNQ" FT CDS complement(1711..2529) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZV2" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZV2" FT /protein_id="ACF40570.1" FT /translation="MTSSSSNRQFLHRNVNTFLTYPHCPENPEIVSQKLWELVGRWKPL FT YIICAREAHEDGNLHLHVLIQTDKPVRTSDSRFFDIDGFHPNIQSAMSVNKVRDYILKE FT PLALFERGTFIPRKKSVLGNSSKGNSEKKPSKDEIMQDIISHATSKREYLSMVRKSFPY FT DWATKLQYFEYSASKLFPDIQEEFINPHPTSEPDLLCNESIKDWLQPNIYQVSPEAYML FT LQPTCYSVDDAISDLQWLDDVSSKQIMDQGSRASTSSVQQGQGNLLGPEA" XX SQ Sequence 2688 BP; 680 A; 622 C; 704 G; 682 T; 0 other; taatattacc gcgccttctt tatctgcgag ggcccgtagg gaccgagcgt ctttgattta 60 aagctcagat ctgctttgtc gtgaaatttc aaagctgcct tgtttaaaga cgccgtcaca 120 tgcgactata aattgtctca caagtgcgat tcattcatgg atcctcagag tgcgatctat 180 actctcccac gggtacccac agcagctccg acaaccggag gttggtcgtg gagtcacgtc 240 ggcgaggtag ctatattgag ctttgttgct ttgatttgca tttacctgct ttacctttgg 300 gtgttgagag atcttatctt agtcctgaag gcaagacgcg ggaggtccac ggaggagctg 360 atatttggat cggaagctgt ggataggagg aaccctatcc ctaatacttt ggaaccaaca 420 gctccagtgc atcccggacc gttcgttcca ggtcagggat aagccttcag ccatgtcgac 480 gtccaagagg aagcgtgccg acgaggcgca atggaatcag cggtccacca agaagaaagc 540 ttctgcgccg aaggcgaaga aggctggggg taagggtgag aagccttccc tccagatcca 600 gactctcctc cactcaggtg acacgatgat caccgtaccg tccggtgggg tctgtgacct 660 catcaataca tatgcccgag ggtccgatga gggcaaccgg cacaccagcg aaaccctaac 720 gtacaaagtt ggggtcgact accacttcgt cgctgacgcc gcatcttgca agtactccaa 780 ccgcggaaca ggtgtgatgt ggctggtgta cgacactact cccggcggaa acgcacccac 840 caccaaagat atcttcgcat actcggacgc actaaaggcc tggccgacta cttggaaagt 900 tagtcgggag ttgtgtcatc gcttcgtggt gaagcggcga tggctcttca caatggagac 960 tgacggtcgg ataggctcgg atacaccacc gagcaacgca agttggccgc catgtaagcg 1020 gaacgtggac ttccacaagt tcactagtgg gttgggagtg aggacgcagt ggaagaacgt 1080 cacagacggc ggagttggtg cgatacagag aggggctctg tatctagtca ttgcccccgg 1140 caatggtatt acgtttactg cccatgggca gacacgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaactgc gttttattat atctgatgaa tgctgcaagc ttacattgat 1260 atgtcgactg atatgtcgaa aacacacgct atcaatacag ggaggggttg tcggcggtaa 1320 cccggccgag cacgcgggca aaacatcaaa aaaaaacctg attatagaat taaacttcct 1380 ccgtaggagg aagctcaggg ggagaatacc atttctcccc cggctgcata acatatatca 1440 tgcagtttgc ttcgaaatac tccagctgcc ctggagtcat gtccttcatc caatcctcat 1500 ccgagttggc gaggatgata gtaggtttag atttcatctg aaccttcttc ttcttgccgt 1560 atttcggatt tacaacgaat tctttttgac agccaaccaa ctgtttccag caaggacaaa 1620 atttgaaagg gatatcatct acgatgttgt agattgcgtc ttcgttgtaa gaagaccaat 1680 caacattatt ttgccagtaa ttatgacgcc ctaagcttct ggcccaagta gatttccctg 1740 tccttgttgg accgacgatg tagaggctct gcttccttga tccattatct gcttgctgga 1800 tacatcatcc agccattgaa gatcagaaat agcgtcgtcg acggaataac aggtgggttg 1860 gagaagcatg tatgcttcgg gactaacctg atagatgttt ggctgcaacc aatctttgat 1920 tgattcgttg catagcaagt ctggttcgga ggtaggatga ggatttatga actcttcctg 1980 aatgtcagga aagagtttgc tggcagagta ctcgaagtac tgcaatttag tggcccaatc 2040 ataagggaat gattttcgga ccatagagag gtactcccgc tttgaagtag catgagaaat 2100 aatgtcttgc attatttcat ctttagaggg tttcttttca gaattaccct ttgaggagtt 2160 tcctaggaca gatttcttcc taggaatgaa agtacctctc tcgaacaagg ccagaggttc 2220 cttgaggatg taatccctta ccttgttgac gctcatggca ctctgaatgt tggggtggaa 2280 accatcgatg tcgaagaacc tggagtcgga ggttctaact ggtttgtccg tctgaattaa 2340 tacatgaaga tgtaaatttc catcctcatg tgcctctcgg gcacatatga tgtacagagg 2400 cttccaacga cctacgagct cccagagttt ctgactgacg atttctggat tttctggaca 2460 gtgtggatat gttaggaatg tgttaacatt cctgtgtagg aactgacggt tggatgagga 2520 ggaggtcata tccgacgacg gaggctgggg ctaggcgaag gcaggcaagg gagctcggaa 2580 aaactctcta ctgaaacacc gcgacttcga aagaatccgc cgccccctct tatagtggtt 2640 gttaatgggc cggaccgggc cggcccagca gatgaagaag gcgcgcaa 2688 //