Dbfetch
ID EU628641; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628641; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-J_Zw-Mic24-1987, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; d49126f36744301391159626de199fdc. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="Pennisetum sp." FT /isolate="MSV-J_Zw-Mic24-1987" FT /mol_type="genomic DNA" FT /country="Zimbabwe" FT /lat_lon="17.88 S 30.96 E" FT /collection_date="1987" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZU4" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZU4" FT /protein_id="ACF40562.1" FT /translation="MDPQSAVYSLPRVPTAAPPNAGVPWSHVGEVAVLSFVALICIYLL FT YLWVLRDLILVLKARRGRSTEELIFGSEAVDRRTPIPSTLEPTAPVHPGPFVPGSG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZU5" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZU5" FT /protein_id="ACF40563.1" FT /translation="MSTSKRKRADEVQWNKRTTKKKASAPPVKKPGGKAERPSLQIQTL FT LHSASTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKVGVDYHFVADSAACRYSNR FT GTGVMWLVYDTTPGGNAPSTKDIFAYPDALVAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDIPPTNQSWPPCKRNIDFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGVTFTAHGQTRLYFKSVGNQ" FT CDS complement(1714..2532) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZU6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZU6" FT /protein_id="ACF40564.1" FT /translation="MTSSSSNRQFLHRNANTFLTYPQCPENPEIISQRIWDLVGRWNPL FT YIICAREAHRDGNMHLHALVQTEKPVRTTDPRFFDIDGFHPNIQSAQSVNKVREYILKE FT PLALFERGTFIPRKKTFLGNSSKGNSETKPSKDEIMRDIISHATSKHEYLSMIQKSFPY FT DWSTKLQYFEYSANKLFPDIQEEFISPHPPSSPDLLCNETIKDWLQPNIYQVSPEAYML FT LQPNCYSLDDAISDLQWLDDLSSKQIMDQGSRASTSSVQQGQGNQLGQEA" XX SQ Sequence 2687 BP; 661 A; 608 C; 716 G; 702 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgtagg gaccgagcgt ctttgattta 60 aagtctggat ctgctttgtt ggatttatca aagctgcctt attgaaagcc gccggtcccc 120 tgcgactata aattgtctac caagtgcgat tcattcatgg atccccagag tgctgtctac 180 tctttgccgc gggtacccac agcagctccg cccaacgcag gagtgccgtg gagtcacgtc 240 ggcgaggtag ctgttttgag ctttgttgct ttgatttgca tttacttgct ttacctttgg 300 gtgctgagag atcttatctt agtcttgaag gcaagacgcg ggagatccac ggaggagctg 360 atatttggat ctgaagctgt ggataggagg actcctatcc ctagtacttt ggaaccaaca 420 gctccagtgc atcccggacc atttgttcct ggttcgggat aagccttcag ccatgtcgac 480 gtccaagagg aagcgcgccg atgaggtgca gtggaataag aggaccacca agaagaaagc 540 ttctgcacca ccggtgaaga agcctggggg taaggctgag cggccttccc tccagataca 600 gactctcctg cactccgcgt ccaccatgat aaccgtaccg tcaggtgggg tctgtgacct 660 catcaacaca tatgcccgag ggtccgatga gggcaaccgg cacaccagcg aaaccctaac 720 gtacaaagtt ggggtcgatt accacttcgt cgcagactct gcagcatgca ggtactccaa 780 ccgcggtaca ggtgtgatgt ggctggtgta cgacactacc cccggcggaa atgcaccatc 840 cacgaaggac atcttcgcct atccggacgc actagtagct tggccgacga cttggaaagt 900 tagtcgggag ttgtgtcacc gcttcgtggt gaagcggcga tggctcttca caatggagac 960 cgacggtcga attgggtcgg acatccctcc gaccaatcag agttggccgc catgtaagcg 1020 gaacattgac ttccacaagt tcactagtgg gttgggggtg aggacgcagt ggaagaatgt 1080 aacagacggt ggggtcgggg cgatacagag aggtgctctg tatatggtaa ttgctcctgg 1140 caatggtgta acctttactg cccatgggca gacacgtctg tacttcaaga gtgtgggcaa 1200 ccagtaatga ataaaacccc gttttattat atgtgatgaa tgctgaaagc ttacattaat 1260 atgtcgtgcg atggcacgaa aaacacgcta tcaatacagg ggggtcgggg caaagcaggc 1320 ggctataggg cgcgcccggg gcaaaacatt aaaaaaaaca ccgatatatg aattaaactt 1380 cctccgtagg aggaagctga gggggagaat accacttctc ccccggcgac ataacataaa 1440 tgacgcagtt tgcttcgaaa tactccagtt gccctggagt catttccttc atccagtctt 1500 catccgagtt ggcgaggata attgtaggtt tagacttcat ctgaaccttc ttcttcttgc 1560 catattttgg atttacaacg aattcctttt gacagccaac taactgtttc caacaaggac 1620 aatatttaaa ggggatatca tctacgatgt tgtagattgc gtcctcgttg tatgaggacc 1680 aatcaacatt attttgccag taattatgaa gccctaagct tcttgcccaa gttgatttcc 1740 ctgtccttgt tggaccgagg atgtagaggc tctgcttcct tgatccatta tctgcttgct 1800 ggataaatca tccagccatt ggagatcaga aatagcgtcg tcgagggaat aacagtttgg 1860 ttgaagaagc atgtaagctt cgggactgac ctgatagatg ttaggctgga gccaatcttt 1920 gattgtctcg ttacagagga gatcaggtga ggagggtgga tgaggactga tgaactcttc 1980 ctggatgtca ggaaagagtt tgttggccga gtactcgaag tactgtaatt tggtggacca 2040 gtcataaggg aaggatttct gaatcatgga gaggtactca tgcttagaag tagcatggga 2100 aataatgtct cgcattattt catcttttga aggttttgtt tcagaatttc cctttgaaga 2160 gtttcctagg aaggttttct tcctaggaat gaaagtacct ctctcgaaca aggccagtgg 2220 ttccttgagt atgtattctc tgaccttgtt tacgctttgc gcactctgaa tgttggggtg 2280 gaagccatca atatcgaaga acctgggatc ggtagttctt actggttttt ccgtctgtac 2340 taatgcatgt aaatgcatat ttccatctct atgagcctct cgggcacata tgatgtacag 2400 aggattccaa cgacctacga gatcccaaat cctctgactg atgatttctg gattttctgg 2460 acactgtgga tatgtgagga atgtgttagc attcctgtgt aagaactgac ggttggatga 2520 ggaggaggtc atatccgacg acggaggcag aagctagggg aaggcaggga tgggagctca 2580 aactctatac tgatacaccg cgacttcgaa atccgccgcc gccccctttt atagtggtcg 2640 tttatgggcc ggaccgggcc ggcccagcag gaaaagaagg cgcgcat 2687 //