ID EU628633; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC EU628633; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-G_Ng-Dig45-Jic5-2002, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2690 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; fb0342602c8588d96e9e8418685def4c. XX FH Key Location/Qualifiers FH FT source 1..2690 FT /organism="Maize streak virus" FT /host="Digitaria sp." FT /isolate="MSV-G_Ng-Dig45-Jic5-2002" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /collection_date="2002" FT /db_xref="taxon:10821" FT CDS 157..465 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZS0" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZS0" FT /protein_id="ACF40538.1" FT /translation="MDPQNSFLLQPRVPTATPSQTGGVPWSHVGEVAILSFVGLICLYL FT FYLWVLRDLILVLKARQGRSTEELVFGEQGVDRREPIPNRSASAGPVNPGPFVPGSG" FT CDS 476..1210 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZS1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZS1" FT /protein_id="ACF40540.1" FT /translation="MSTSKRKRGDDANWKKGTAKKKTSAAGLKKSVSKADRPSLQIQTL FT LHAGTTMITVPSGGICDLISTYARGSDEGNRHTSETLTYKMSLDYHFVADAAACKYSNI FT GTGVVWLVYDTTPGVQAPTTKQIFAYNDSLAAWPTTWKVSREMCHRFVVKRRWLFTMET FT NGRIGSDMPPSNAIWNPCKRSINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAYGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZS2" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZS2" FT /protein_id="ACF40539.1" FT /translation="MASSSSNRQFSHRNANTFLTYPQCPENPEIVCQMIWELVGHWNPK FT YIICAREAHRDGNMHLHALVKTEKPVRTTDPRFFDNKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGNSDSEGNSKKPTKDEIMREIISHYTNKQEYLSMIQKEFPY FT DWATKLQYFEYSANKLFPEIQEEFINHHPPSSPDLLCSESIEDWLQPKIFQVSPEAYML FT LQPTCYSVEDAISDVQWMDNLSSQQMKDQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2690 BP; 675 A; 614 C; 671 G; 730 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccgctag ggcccgagcg atttgattta 60 aagtttagat ctgctttgtt tgatttatct aaagcagccc aatctaaaga aaccggtccc 120 ggtcactatt aattgcctaa caagtgcgat tcattcatgg atccacagaa ctcctttctt 180 ctacagccgc gggtacccac agcgactcct tcgcagacag gaggagtgcc gtggagtcac 240 gttggcgagg tagctatttt gagctttgtt ggtttgattt gcctttacct gttttacctt 300 tgggtgctga gagatcttat cttagttctg aaggctcgac aagggagatc cacggaagag 360 ctggtattcg gcgaacaagg tgtggatagg agagaaccta tccctaatag atcagcttct 420 gcaggtccag tgaatcccgg accatttgtt cctggttcgg gataagcaat cagccatgtc 480 cacgtccaag aggaagcggg gagatgatgc gaactggaag aaggggacgg ctaagaagaa 540 gacttctgca gctggcctga agaagtctgt aagcaaggcc gataggccat ccctccaaat 600 tcagacactc ttgcatgcgg ggaccacaat gataacagtc ccctccggag gtatttgcga 660 cctcatcagc acctatgccc gaggttcaga tgagggcaac cgacacacca gcgagactct 720 tacgtataag atgtccctcg actaccactt cgttgctgac gcagcagcgt gcaagtactc 780 caacattgga accggcgtgg tctggctggt ttacgacact actcccggcg tacaagcccc 840 gactaccaaa cagatatttg cctacaacga cagcctagct gcctggccga cgacctggaa 900 ggtgagccgg gagatgtgtc accgcttcgt ggtgaaacgc cgttggctgt tcaccatgga 960 gaccaacggt cgcattggtt cggacatgcc tccatcgaac gccatttgga acccctgcaa 1020 gcggagcatt aacttccaca agttcacgag tgggttggga gtaagaacga tgtggaagaa 1080 tgtcacagac ggtggcgttg gttcgataca gagaggagcc ttgtatatgt gcattgcccc 1140 tggcaatgga cttacattta ctgcctatgg gcagacccgt ctgtacttta agagtgttgg 1200 caaccagtaa tgaataaaaa ctccggtttt attatattga tgaatgctga aagcttacat 1260 taatatgtcg tgcgatggca cgaaaacaca cgctatcaat acaggggggt agtcggaggg 1320 cggctaaggg tggtgctcgg cgggcaaaac atcaaaaaat caagatgttt atgaatgttc 1380 tgcctccgta ggaggcagct ccaggggaga ataccacttc tcccctggct gtatgatgta 1440 tatcatgcag tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccaatc 1500 ttcatccgag ttggcgagaa tgattgtagg tttagacttc atctgaacct tcttcttctt 1560 cccatactta ggatttagaa tgaactcttt ttgacagcca actaactgtt tccaacaagg 1620 acagaattta aacgggatat catctactat gttgtagatt gcgtcttcgt tgtatgaaga 1680 ccaatcaaca ttattttgcc agtaattatg aacccctagg cttctggccc aagtagattt 1740 tccagttctt gttggaccga cgatgtagag gctctgcttt cttgatcttt catctgttga 1800 ctggataagt tatccatcca ttgaacgtca gaaattgcat cctcgacgga ataacaggta 1860 ggttgaagga gcatgtaagc ttcgggacta acctgaaaga ttttaggctg gagccaatct 1920 tcgattgact cactacaaag caaatccggt gatgagggtg gatgatgatt gatgaactct 1980 tcctgaatct caggaaaaag tttatttgca gagtattcaa aatactgcaa ttttgttgcc 2040 cagtcataag ggaactcttt ctggatcatc gagaggtact cttgcttatt agtgtagtgt 2100 gaaataatct ctctcattat ttcatctttt gtaggtttct ttgaatttcc ctctgaatca 2160 gaatttccta ggaaggggga cttcctagga atgaaagtac ctctctcaaa taaagccaga 2220 ggttccttga gaatgtagtc tcgaaccttg ttaactgact ttgcactctg aatgtttggg 2280 tggaaccctt tgttatcaaa gaaccttggg tcagtagttc ttaccggttt ctccgtcttg 2340 actaatgcat gtaaatgcat atttccatct ctatgtgcct ctcgggcaca tatgatgtac 2400 ttagggttcc agtgaccaac gagctcccag atcatctgac agacgatttc tggattttct 2460 ggacattgtg gatatgttag gaacgtgtta gcgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatccga cgacggagga tgatgctagg ggatggcaga ttgggagctc 2580 ccaaactcta tcctaccggt gcgccttcga aatccgccgc tcctgggcct ttctagtggt 2640 tgtattctgg gccggaccgg gccggcccag caggaaaaga aggcgcgcac 2690 //