ID EU628630; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628630; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-F_Ug-SN117-2005, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; c9f6d826bf73d2e9f865a5dd1fc82d39. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-F_Ug-SN117-2005" FT /mol_type="genomic DNA" FT /country="Uganda" FT /lat_lon="0.58 N 33.53 E" FT /collection_date="2005" FT /db_xref="taxon:10821" FT CDS 157..465 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZR1" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZR1" FT /protein_id="ACF40529.1" FT /translation="MDPQNSFLLQPRVPTATPSQTGGVPWSRVGEVAILSFVALICFYL FT LYLWVLRDLILVLKARQGRSTEELVFGEQGVERIEPIPNRSASAGPVNPGPFIPGQG" FT CDS 476..1210 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZQ6" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZQ6" FT /protein_id="ACF40530.1" FT /translation="MSTSKRKRGDDASWKKGTAKKKTSAAGLKKSATKAERPSLQIQTL FT LHAGTSMITVPSGGICDLISTYARGSDEGNRHTSETLTYKISLDYHFVADAASCKYSNV FT GTGVVWLIYDTTPGGQAPTTKQIFAYNDNLAAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDIPPSNASWKPCKRNINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZR3" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZR3" FT /protein_id="ACF40531.1" FT /translation="MASSSSNRQFSHRNANTFLTYPHCPENPEIVCQIIWELVGRWTPK FT YIICAREAHRDGDLHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGKRDSEGNSKKPSKDEIMQEIISHSTSKQEYLSLVRKELPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIYQVSPESYML FT LQPTCYTVEDAISDLEWMDKLSSQQMKDQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2687 BP; 702 A; 606 C; 668 G; 711 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgcaag ggcccgagcg atttgattta 60 aagtttagat ctgctttgtt tgatttatct aaagcagcca aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa ctcctttctt 180 ctacagccgc gggtacccac agcgactcct tcgcagacag gaggagtgcc gtggagtcgc 240 gtcggcgagg tagctatttt gagctttgtt gctttgattt gcttttacct gctttacctt 300 tgggtactga gagatttgat cttagttctg aaggcaagac aagggagatc cacggaagag 360 ctggtattcg gcgaacaagg agtggagagg atagaaccta tccctaatag atcagcttct 420 gcaggtccag tgaatcccgg accatttatt cctggtcagg gataagcaat cagccatgtc 480 cacgtccaag aggaagcggg gagatgatgc gagctggaag aaggggacgg ctaagaagaa 540 gacttctgca gctggtctga agaagtctgc aaccaaggcc gagaggccct cactccagat 600 ccaaacactc ttgcatgcag ggacgtcaat gataacagtc ccctccggag gaatatgcga 660 cctaatcagc acctatgccc gaggttcaga tgagggcaat cgtcacacga gcgagactct 720 tacgtacaag atatccctcg actaccactt cgttgccgac gcagcatcct gcaagtactc 780 caacgttggg actggcgtgg tgtggctcat ctacgacacg acgcccggcg gacaagcgcc 840 gacgacaaaa cagatatttg cctacaacga caacttggcg gcttggccga cgacctggaa 900 agtgagccgg gagttgtgtc accgcttcgt ggtgaaacgc cgttggttgt ttaccatgga 960 gaccgacggt cgcattggtt cggacatacc tccgtccaat gcaagttgga agccgtgcaa 1020 gcggaacatt aacttccaca agttcacgag tgggttggga gtaagaacga tgtggaagaa 1080 tgtcacggac ggtggtgttg gtagcataca acgaggagct ttgtatatgt gcattgcccc 1140 tggcaatgga cttacattta ctgcccatgg gcagacccgt ctgtacttta agagtgtcgg 1200 caaccagtga tgaataaaaa ctcccgtttt attatatctg atgaatgctg aaagcttaca 1260 ttaatatgtc agccgattgg ctgaacgaaa aatacatagc gcagccgcgg gctaaagacc 1320 gcgtctcaag cgaccctgaa catacaataa tcgaaaaaac aagatgatta tgaattaaac 1380 ttcctccgta ggaggaagca cagggggaga ataccacttc tcccccggcg acataacata 1440 caccatgcaa tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccagtc 1500 ttcatccgag ttggcgagga taattgtagg tttagacttc atctgaactt tcttcttctt 1560 gccatattta ggatttacaa cgaattcttt ttgacagcca actaactgtt tccaacaagg 1620 acagtattta aatggaatat catctacgat gttgtagatt gcgtcttcgt tgtaagaaga 1680 ccaatcaaca ttattttgcc agtaattatg aactcctagg cttctggccc aagtagattt 1740 tccagttctt gttggaccga cgatgtagag gctctgcttt cttgatcctt catctgttgg 1800 ctggataatt tatccatcca ttcaaggtca gagatagcat cctcgacggt ataacaggtt 1860 ggttgaagaa gcatgtatga ttcgggacta acctgatata tgttaggctg gagccaatct 1920 ttgattgact cgttacaaag gagatcaggt gaagagggtg gatgaggact gatgaactct 1980 tcctgaatct caggaaacag tttatttgca gagtattcaa aatactgcaa tttggtggcc 2040 cagtcataag gcaattcctt acgaacaaga gagaggtact cttgctttga agtggagtgt 2100 gaaataatct cttgcattat ttcatctttg gaaggttttt tgctatttcc ctctgaatct 2160 ctttttccta ggaatggtga cttcctagga atgaaagtac ctctctcaaa taaagccaga 2220 ggttccttga gaatgtagtc gcgaaccttg tttactgact ttgcactctg aatgtttggg 2280 tggaaccctt tgatatcaaa gaaccttgag tcagtgatcc ttaccggttt ctctgtttgg 2340 attaatgcat gtaaatgcaa atctccatct ctatgtgcct ctcgggcaca tatgatgtac 2400 ttaggggtcc aacgaccgac gagctcccag ataatctgac agacgatttc tggattttct 2460 ggacagtgtg gataggttag gaacgtgtta gcgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatcgga cgactccgag ctgtttgcgg gatggcaggt tgggagctct 2580 caaaactcta tgtaaccggt gcgccttcaa aatccgccgc tcccctcttt atagtggttg 2640 tttctgggcc ggaccgggcc ggcccagcag aaaaagaagg cgcgcaa 2687 //