ID EU628629; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC EU628629; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-F_Ng-IntB-g88-2007, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2686 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2686 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; dd3696265d999239b31fea02259e6804. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Maize streak virus" FT /host="Urochloa maxima" FT /isolate="MSV-F_Ng-IntB-g88-2007" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /lat_lon="7.41 N 3.9 E" FT /collection_date="2007" FT /db_xref="taxon:10821" FT CDS 157..465 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZQ5" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZQ5" FT /protein_id="ACF40526.1" FT /translation="MDPQNSFLLQPRVPTATPSQTGGVPWSRVGEVAILSFVALICFYL FT LYLWVLRDLILVLKARQGRSTEELVFGEQGVERIDPIPNRSASAGPVNPGPFVPGQG" FT CDS 476..1210 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZQ6" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZQ6" FT /protein_id="ACF40527.1" FT /translation="MSTSKRKRGDDASWKKGTAKKKTSAAGLKKSATKAERPSLQIQTL FT LHAGTSMITVPSGGICDLISTYARGSDEGNRHTSETLTYKISLDYHFVADAASCKYSNV FT GTGVVWLIYDTTPGGQAPTTKQIFAYNDNLAAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDIPPSNASWKPCKRNINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZQ7" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZQ7" FT /protein_id="ACF40528.1" FT /translation="MASSSSNRQFSHRNANTFLTYPQCPENPEIVCQIIWELVGRWNPK FT YIICAREAHRDGNLHLHALVQTDKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGNSDSEGNSRKPNKDEIMREIISHSTNKQEYLSMIQKEFPY FT DWATKLQYFEYSANKLFPEIQEDFISPHPPSSPDLLCNESIKDWLQPNIYQVSPESYML FT LQPTCYTVEDAISDLEWMDKLSSQQMKEQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2686 BP; 703 A; 605 C; 670 G; 708 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccgcaag ggcccgagcg atttgattta 60 aagttcagat ctgctttgtt tgatttatct aaagcagcca aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa ctcctttctt 180 ctacagccgc gggtacccac agcgactcct tcgcagacag gaggagtgcc gtggagtcgc 240 gtcggcgagg tagctatttt gagctttgtt gctttgattt gcttttacct gctttacctt 300 tgggtgctga gagatttaat cttagttctg aaggcaagac aagggagatc cacggaagag 360 ctggtattcg gcgaacaagg agtggagagg atagatccta tccctaatag atcagcttct 420 gcaggtccag tgaatcccgg accatttgtt cctggtcagg gataagcaat cagccatgtc 480 cacgtccaag aggaagcggg gagatgatgc gagctggaag aaggggacgg ctaagaagaa 540 gacttctgca gctggtctga agaagtctgc aacgaaggcc gagaggccct cactacagat 600 ccaaacactc ttgcatgcag ggacgtcaat gataacagtc ccctccggag gaatttgcga 660 cctaatcagc acctatgccc gaggttcaga tgagggcaat cgtcacacga gcgagactct 720 tacgtacaag atatccctcg actaccactt cgtagccgac gcagcatcct gcaagtactc 780 caacgttggg actggcgtgg tgtggctcat ctacgacacg acgcccggcg gacaagcgcc 840 gacgacaaaa cagatatttg cctacaacga caacttggcg gcttggccga cgacctggaa 900 agtgagccgg gagttgtgtc accgcttcgt ggtgaaacgc cgttggttgt ttaccatgga 960 gaccgacggt cgcattggtt cggacatacc tccgtccaat gcaagttgga agccgtgcaa 1020 gcggaacatt aacttccaca agttcacgag tgggttggga gtaagaacga tgtggaagaa 1080 tgtcacggac ggtggtgttg gtagcataca acgaggagct ctgtatatgt gcattgcccc 1140 tggcaatgga cttacattta ctgctcatgg gcagacccgt ctgtacttta agagtgtcgg 1200 caaccagtaa tgaataaaaa cttccgtttt attatatctg atgaatgctg aaagcttaca 1260 ttaatatgtc agccgattgg ctgaacgaaa aatacatagc gcagccgcgg gctaaagacc 1320 gcgtctcaag cgaccctgaa catacaataa tcgaaaaaac aagatgatta tgaattaaac 1380 ttcctccgta ggaggaagca cagggggaga ataccacttc tcccccggcg acataacata 1440 gaccaagcaa tttgcctcga aatactccag ttgccctgga gtcatttcct tcatccagtc 1500 ttcatccgag ttggcgagga taattgtagg tttagacttc atctgaactt tcttcttctt 1560 gccatatttt ggatttacga cgaactcttt ttgacagcca actaactgtt tccaacaagg 1620 acaatattta aatggaatat catctacgat gttgtagatt gcgtcttcgt tgtaagaaga 1680 ccaatcaaca ttattttgcc agtaattatg aacccctagg cttctggccc aagtagattt 1740 tccagttctt gttggaccga cgatgtagag gctctgcttt cttgttcctt catctgttgg 1800 ctggataatt tatccatcca ttcaaggtca gagatagcat cctcgacggt ataacaggtt 1860 ggttgaagaa gcatgtatga ttcgggacta acctgataga tgttaggctg gagccaatct 1920 ttgattgact cattacaaag tagatcaggt gaagagggtg gatgagggct gatgaaatct 1980 tcctgaatct caggaaaaag tttatttgca gagtattcaa aatactgcaa ttttgtggcc 2040 cagtcataag gaaactcttt ctggatcata gagaggtact cttgcttatt agtggagtgg 2100 gaaataatct ctctcattat ttcatctttg ttgggtttcc tagaatttcc ctctgaatca 2160 gaatttccta ggaatggaga cttcctaggg atgaaagtac ctctctcaaa taaagctaga 2220 ggttccttga gaatgtagtc tcgaaccttg tttactgact ttgcactctg aatgtttggg 2280 tggaagccct tgatatcaaa aaaccttgag tcagtgatcc ttaccggttt gtccgtctgg 2340 actaatgcat gtaaatgcaa atttccatct ctatgtgcct ctcgggcaca tatgatgtac 2400 ttagggttcc aacgaccaac gagctcccag attatctgac agacgatttc tggattttct 2460 ggacattgtg gatatgttag gaacgtgtta gcgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatccga cgacggagga tgaggctagg ggatggcaga ctgggagctc 2580 ccaaactcta tcctaccggt gcgccttcaa aatccgccgc tccccctctt atagtggttg 2640 tgtttgggcc ggactgggcc ggcccgcggg aaaagaaggc gcgcac 2686 //