ID EU628627; SV 1; circular; genomic DNA; STD; VRL; 2685 BP. XX AC EU628627; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-F_Bi-Rob3-1990, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2685 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2685 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 121d61692c3be4c1595ed5eb82ba4884. XX FH Key Location/Qualifiers FH FT source 1..2685 FT /organism="Maize streak virus" FT /isolate="MSV-F_Bi-Rob3-1990" FT /mol_type="genomic DNA" FT /country="Burundi" FT /collection_date="1990" FT /db_xref="taxon:10821" FT CDS 157..465 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZQ2" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZQ2" FT /protein_id="ACF40520.1" FT /translation="MDPQDSFLLQPRVPTATPSQTGGVPWTRVGEVAILSSVALICFYL FT LYLWLLRDLILVLKARQGRSTEELVFGEQGVERIEPIPNRSASAGPVNPGPFIPGQG" FT CDS 476..1210 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZQ3" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZQ3" FT /protein_id="ACF40522.1" FT /translation="MSTSKRKRGDDASWKKGTAKKKTSAAGLKKSATKAERPLLQIQTL FT LHAGTSMITVPSGGICDLISTYARGSDEGNRHTSETLTYKISLDYHFVADAASCKYSNV FT GTGVVWLIYDTTPGGQAPTTKQIFAYNDNLAAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDIPPSNASWKPCKRNINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1715..2533) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZQ4" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZQ4" FT /protein_id="ACF40521.1" FT /translation="MASSSSNRQFSHRNANTFLTYPHCPENPEIVCQIIWELVGRWTPK FT YIICAREAHRDGDLHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGKRDSEGNRKKPSKDEIMQEIISHSTSKQEYLSLVRKELPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNETIKDWLQPNIYQVSPESYML FT LQPTCYTVEDAISDLEWMDKLSSQQMKDQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2685 BP; 696 A; 609 C; 674 G; 706 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgcaag ggcccgagcg atttgattta 60 aagtttagat ctgctttgtt tgaattatct aaagcagcca aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagga ctcctttctt 180 ctacagccgc gggtacccac agcgactcct tcgcagacag gaggagtgcc gtggactcgc 240 gtcggcgagg tagctatttt gagctctgtt gctttgattt gcttttacct gctttacctt 300 tggttgctga gagatttaat cttagttctg aaggcaagac aagggagatc cacggaagag 360 ctggtattcg gcgaacaagg agtggagagg atagaaccta tccctaatag atcagcttct 420 gcaggtccag tgaatcccgg accatttatt cctggtcagg gataagcaat cagccatgtc 480 cacgtccaag aggaagcggg gagatgatgc gagctggaag aaggggacgg ctaagaagaa 540 gacttctgca gctggtctga agaagtctgc aaccaaggcc gagaggccct tactccagat 600 ccaaacactc ttgcatgcag ggacgtcaat gataacagtc ccctccggag gaatttgcga 660 cctaatcagc acctatgccc gaggttcaga tgagggcaat cgtcacacga gcgagactct 720 tacgtacaag atatccctcg actaccactt cgttgccgac gcagcatcct gcaagtactc 780 caacgttggt actggcgtgg tgtggctcat ctacgacacg acgcccggcg gacaagcgcc 840 gacgacaaaa cagatatttg cctacaacga caacttggcg gcttggccga cgacctggaa 900 agtgagccgg gagttgtgtc accgcttcgt ggtgaaacgc cgttggttgt ttaccatgga 960 gaccgacggt cgcattggtt cggacatacc tccgtccaat gcaagttgga agccgtgcaa 1020 gcggaacatt aacttccaca agttcacgag tgggttggga gtaagaacga tgtggaagaa 1080 tgtcacggac ggtggtgttg gtagcataca gcgaggagct ctgtatatgt gcattgcccc 1140 tggcaatgga cttacattca ctgcccatgg gcagacccgt ctgtacttta agagtgtcgg 1200 caaccagtga tgaataaaaa ctcccgtttt attatatctg atgaatgctg aaagcttaca 1260 ttaatatgtc gtgcgattgc acgaaaacac actatcaata caggggggag gtagccggcg 1320 gctaagggaa cgaagttcgt gggcaaaaca tcaaaaaaac aagatcaatc gaattaaact 1380 gcctccgtag gaggcagcac agggggagaa taccacttct cccccggcga cataacatac 1440 accatgcagt ttgcctcgaa atactccagt tgccctggag tcatttcctt catccagtct 1500 tcatccgagt tggcgaggat aattgtaggt ttagacctca tctgaacttt cttcttcttt 1560 ccatatttag gatttacaac gaactctttt tgacagccaa ctaactgttt ccaacaagga 1620 cagtatttaa acggaatatc atctacgatg ttgtagattg cgtcttcgtt gtaagaagac 1680 caatcaacat tattttgcca gtaattatga acccctaggc ttctggccca agtagatttt 1740 ccagttcttg ttggaccgac gatgtagagg ctctgctttc ttgatccttc atctgttggc 1800 tggataattt atccatccat tcaaggtcag agatagcatc ctcgacggta taacaggttg 1860 gttgaagaag catgtatgat tcgggactaa cctgatagat gttaggctgg agccaatctt 1920 tgattgtctc attacaaagg agatcaggtg aagagggtgg atgaggactg atgaactctt 1980 cctgaatctc aggaaacagt ttatttgcag agtattcaaa atactgcaat ttggtggccc 2040 agtcataagg taattcctta cgaacgagag agaggtactc ttgcttggaa gtggagtgtg 2100 aaataatctc ttgcattatt tcatctttgg aaggtttttt tctatttccc tctgaatccc 2160 tttttcctag gaatggtgac ttcctaggaa tgaaagtacc tctctcaaat aaagctagag 2220 gttccttgag aatgtagtct cgaaccttgt ttactgactt tgcactctga atgtttgggt 2280 ggaacccttt gatatcaaag aaccttgagt cagtgatcct taccggtttc tctgtttgga 2340 ttaatgcatg taaatgcaaa tctccatctc tatgtgcctc tcgggcacat atgatgtact 2400 taggggtcca acgaccgacg agctcccaga taatctgaca gacgatttct ggattttctg 2460 gacagtgtgg ataggttagg aacgtgttag cgttcctgtg tgagaactga cggttggatg 2520 aggaggaggc catatcggac gactccgagc tgtttgcggg atggcaggtt gggagctccc 2580 aaaactctat gtaaccggtg cgccttcaaa atccgccgct cccctcttta tagtggttgt 2640 tctgggccgg accgggccgg cccagcagaa aaagaaggcg cgcaa 2685 //