ID EU628613; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628613; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B2_Ug-Kib1-2007, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 4595c0e65eac3c2865238f919024da48. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-B2_Ug-Kib1-2007" FT /mol_type="genomic DNA" FT /country="Uganda" FT /lat_lon="0.89 N 31.81 E" FT /collection_date="2005" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZL0" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZL0" FT /protein_id="ACF40478.1" FT /translation="MDPQNTFFVQPRVPTAAPTSGGVPWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNIQAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZL1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZL1" FT /protein_id="ACF40479.1" FT /translation="MSTSKRKRGDDANWNKRSTKKKPSSAGLKKGGAKADRPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZL2" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZL2" FT /protein_id="ACF40480.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQLIWELVGRWTPK FT YIICAREAHKDGDMHLHALVQTDKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNRSKGNSEKKPSKDEIMREIISHSTSKPEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIYQVSPESYML FT LQPTCYTLEDAISDLEWMDKLSSQQMKEQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2687 BP; 698 A; 621 C; 668 G; 700 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgtagg gacccgagcg atttgattta 60 aagtctggtt ctgctttgtt tgattttcca aagcagtcct atctaaagaa accggtcccc 120 tgcgactata aattgcctca caagtgcgat tcatttatgg atccacagaa caccttcttt 180 gtacagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgtc 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag atcttatctt agttttgaag gcaagacaag gcagatccac ggaggagctg 360 atatttggaa tacaagctgt ggataggagt aatcctatcc ctaatataca agcaccacca 420 agtcagggga atcccggacc atttgttcct gggacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgatgcgaa ctggaataag cggtcgacta agaagaagcc 540 ttcttcagct ggtctgaaga agggtggagc gaaggccgat aggccatccc tccagatcca 600 gacactccag catgctgggt ccaccatgat aacagtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt cgcagacgcg caagcctgca agtactccaa 780 caccggaacc ggtgtgatgt ggctggtgta tgacaccact cccggcggac aagcgccgac 840 cccccaaacc atatttgcct acccggacac gctaaaagct tggccggcaa catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccccgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1200 ccagtgatga ataaaaactc ccgttttatt atatctgatg aatgctcaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaacacac gctatcaata caggggggag gtagccggcg 1320 gctaagggaa cgaagttcgt gggcaaaaca tcaaaaaaac aacacgcaat agtattaacc 1380 ttcctccgtc ggaggaagct gagggggaga ataccacttc tcccccggcg acataatata 1440 aatcatgcag tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccagtc 1500 ttcatccgag ttggcgagga taattgtagg cttagacttc atctgcactt tcttcttctt 1560 tccatatttt ggatttacaa cgaactcttt ctgacagcca actaactgtt tccaacaagg 1620 acagtattta aatggaatat catctacgat gttgtagatt gcgtcttcgt tgtatgaaga 1680 ccaatcaaca ttattttgcc agtaattatg aacccctagg cttctggccc aagtagattt 1740 tccagttctt gttggaccga cgatgtagag gctctgcttt cttgttcctt catctgttgg 1800 ctggataatt tatccatcca ttcaaggtca gagatagcat cttcgagggt ataacaggtt 1860 ggttgaagaa gcatgtatga ttctggacta acctgataga tgtttggctg gagccaatct 1920 ttgattgact cattacaaag gagatcaggt gaagagggtg gatgaggact gatgaactct 1980 tcctgaatct caggaaacaa tttatttgca gagtattcaa aatactgcaa ttttgtggcc 2040 cagtcatagg ggaattcttt acgaatcatt gagaggtact caggctttga agtggaatgt 2100 gaaataatct ctctcattat ttcatctttg gaaggtttct tttcagaatt ccccttggaa 2160 cgatttccta ggaagcttga cttcctagga atgaaagtac ctctctcaaa caaggccaga 2220 ggttccttga gaatgtaatc cctgaccttg tttacagatt ttgcactctg aatgtttggg 2280 tggaaacctt tgatatcaaa gaaccttgag tcagtgattc ttaccggttt atcagtttgg 2340 actaatgcat gtaaatgcat atctccatct ttgtgtgcct ctcgggcaca aatgatgtac 2400 ttaggagtcc aacgacctac gagctcccaa atcaactgac agacgatttc tggattttct 2460 ggacagtgtg gatatgttaa gaacgtgtta acgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatcgga cgactccgag cagcttgccg gatggcagga tgggagctcc 2580 aaactctatg taaccggttt gcgccttcga aatccgccgc tccccctttt atagtggttg 2640 tttatgggcc ggaccgggcc ggcccagcag gaaaagaagg cgcgcaa 2687 //