ID EU628608; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC EU628608; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-ThoD-g134-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2686 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2686 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; b2a97e7a9f4105773b9929a724358d3f. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Maize streak virus" FT /isolate="MSV-B1_Za-ThoD-g134-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.9 S 31.03 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZE7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZE7" FT /protein_id="ACF40463.1" FT /translation="MDPQNSFFVQPRVPTAAPTSGGVSWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQAPPIQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZC1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZC1" FT /protein_id="ACF40464.1" FT /translation="MSTSKRKRGDDSNWNKRTTKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1715..2533) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZJ7" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZJ7" FT /protein_id="ACF40465.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHKDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMVRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEEAISDLTWMDQLSSQQMKEQESRASTSSVQQEQGNLLGPEA" XX SQ Sequence 2686 BP; 696 A; 616 C; 672 G; 702 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgtagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtctca caagtgcgat tcattcatgg atccacagaa ctccttcttt 180 gtacagccgc gggtacccac agcagctccg acatccggag gagtgtcgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggaa tacaagctgt ggataggagc aaccctatcc ctaatacaca ggcaccacca 420 attcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ctggaataag cggacgacta agaagaagcc 540 ttcttcagct ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aaccgtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagactcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta cgacaccact cccggcggac aagcgccgac 840 cccacaaacc atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttta acatggagac 960 cgacggtcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtgatga ataaaaactc cgttttatta tatctcatga atgctgaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaaacacact atcaatacag ggcgggcagg gcaaagcagg 1320 cggcgtatgg gcgcgcccgg ggcaaaacat taaaaaaaac accgatatat gaattaaact 1380 tcctccgtag gaggaagcac agggggagaa taccacttct cccccggcga cataacataa 1440 atcatgcagt ttgcttcgaa atactccagc tgccctggag tcatttcctt catccagtct 1500 tcatccgagt tggcgaggat tattgtaggt ttagacttca tctgaacctt cttttttttt 1560 ccatatttag gattcacaac gaattccttt tgacagccaa ctaactgttt ccaacaagga 1620 caatatttaa atgggatatc atctacgatg ttgtagattg cgtcttcgtt gtatgaagac 1680 caatcaacat tattttgcca ataattatga agccctaagc ttctggccca agtagatttc 1740 cctgttcttg ttggaccgac gatgtagagg ctctgctttc ttgttccttc atctgttggc 1800 tggataattg atccatccat gtaaggtcag agatagcctc ttcgagggtg taacaggttg 1860 gttgaagaag catgtatgat tcgggactaa cctggaagat gttaggctgg agccaatctt 1920 tgattgactc attacaaaga agatcaggtg aagagggtgg atgaggactg atgaactctt 1980 cctgaatctc agggaacaat ttatttgcag agtattcaaa atactgcaat tttgtggccc 2040 agtcataggg gaactcttta cgaaccatag agaggtactc tagctttgaa gtggagtgtg 2100 aaataatctc tctcattatt tcatctttgg aaggtttctt ttcagaattt cccttggaag 2160 gatttcctag gaagcttgac ttcctaggaa tgaaagtacc tctctcaaac aaggccagag 2220 gttccttgag aatgtaatcc ctgaccttgt ttactgattt tgcactctga atgtttgggt 2280 ggaacccttt gatatcaaag aaccttgagt cagtgattct taccggtttc tctgtctgga 2340 ttaatgcatg taaatgcata tctccatctt tatgtgcctc tcgggcacat atgatatact 2400 ttggggtcca acgaccaacg agctcccaaa tcatctgaca gaggatttct ggattttctg 2460 gacagtgtgg atatgttaag aacgtgttaa cgttcctgtg tgagaactga cggttggatg 2520 aggaggaggc catatcggac gactccgagc agcttgcggg atggcaggat gggagctcca 2580 aactctatat caaccggttg cgccttcgaa atccgccgct ccccctttta tagtggttgt 2640 ttatgggccg gaccgggccg gcccagcagg aaaagaaggc gcgcaa 2686 //