ID EU628607; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628607; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-ThoA-2005, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 40cfa5f087dedd325d352f2827d3de6c. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /isolate="MSV-B1_Za-ThoA-2005" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.9 S 31.03 E" FT /collection_date="2005" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B2BX48" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX48" FT /protein_id="ACF40460.1" FT /translation="MDPQNSFLLQPRVPTAAPTSGGVPWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIEAVDRSNPIPNTQAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B2BX46" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX46" FT /protein_id="ACF40461.1" FT /translation="MSTSKRKRGDDANWNKRTTKKKPSSAGLKKAGSKADRPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B2BX50" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B2BX50" FT /protein_id="ACF40462.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEDAISDLEWMDKLSSQQMKEQESRASTSSVQQEQENLLGPEA" XX SQ Sequence 2687 BP; 700 A; 615 C; 674 G; 698 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgaagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtttca caagtgcgat tcatttatgg atccacagaa ctcctttctt 180 ctacagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgtc 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacttgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggaa tagaagctgt ggataggagt aaccctatcc ctaatacaca agcaccacca 420 agtcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgatgcgaa ctggaataag cggacgacta agaagaagcc 540 ttcttcagct ggtctgaaga aggctggaag caaggccgac aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aacagtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagacgcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta cgacaccact cccggcggac aagcgccgac 840 cccacaaacc atatttgcat atccggacac gctgaaagct tggccggcca catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacgggcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaactc ccgttttatt atatatgatc aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaacacac gcaaacaata caggggggta gtaggcgggc 1320 ggctaagggt ggtgctcggc gggcaaaaca tcgaaaaatc aagatctata tgaattacac 1380 ttcctccgta ggaggaagca cagggggaga ataccacttc tcccccggcg acattttata 1440 aatcatgcaa tttgcctcga aatactccag ctgccctgga gtcatttcct taatccagtc 1500 ttcatcccag ttggcgagga tgattgtagg cttagacttc atctgaactt tcttcttctt 1560 gccatatttt ggatttacaa cgaactcttt ctgacagcca actaactgtt tccaacaagg 1620 gcagaattta aaaggaatat catctacgat gttgtagatt gcgtcttcgt tgtaagaaga 1680 ccaatcaaca ttattttgcc aataattatg aagccctaag cttctggccc aagtagattt 1740 tcctgttctt gttggaccga cgatgtagag gctctgcttt cttgttcctt catctgttgg 1800 ctggataatt tatccatcca ttcaaggtca gagatagcat cttcgagggt gtaacaggta 1860 ggttgaagaa gcatgtatga ttcgggacta acctggaaga tgttaggctg gagccaatct 1920 ttgattgact cattacaaag aagatcaggt gaagagggtg gatgaggact gatgaactct 1980 tcctgaatct cagggaacaa tttatttgca gagtattcaa aatactgcaa ttttgtggcc 2040 cagtcatatg ggaactcttt acgaatcata gagaggtact ctagctttga agtggaatgt 2100 gaaataatct ctctcattat ttcatctttg gaaggtttct tttcagaatt tcccttggaa 2160 ggatttccta ggaagcttga cttcctagga atgaaagtac ctctctcaaa caaggccaga 2220 ggttccttga gaatgtaatc cctgaccttg tttacagatt ttgcactctg aatgtttggg 2280 tggaaccctt tgatatcaaa gaaccttgag tcagtgattc ttaccggttt ctctgtctgg 2340 attaatgcat gtaaatgcat atctccatct ctgtgtgcct ctcgggcaca tatgatatac 2400 ttaggggtcc aacgaccaac gagctcccaa atcatctgac agacgatttc tggattttct 2460 ggacagtgtg gatatgttaa gaacgtgtta acgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatcgga cgactccgag cagattgcgg gatggcagga tgggagctcc 2580 aaactctatc tcaaccggct gcgccttcga aatccgccgc tccccctttt atagtggttg 2640 tttatgggcc ggaccgggcc ggcccagtag gaaaagaagg cgcgcaa 2687 //