ID EU628594; SV 1; circular; genomic DNA; STD; VRL; 2682 BP. XX AC EU628594; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-Nat-M43-1988, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2682 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2682 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 6b77acc212963653803c0136834a2f94. XX FH Key Location/Qualifiers FH FT source 1..2682 FT /organism="Maize streak virus" FT /host="Digitaria sp." FT /isolate="MSV-B1_Za-Nat-M43-1988" FT /mol_type="genomic DNA" FT /country="South Africa" FT /collection_date="1998" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZF3" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZF3" FT /protein_id="ACF40421.1" FT /translation="MDPQNSIFVQPRVPTAAPTSGGVPWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNTQAPPIQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZC1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZC1" FT /protein_id="ACF40422.1" FT /translation="MSTSKRKRGDDSNWNKRTTKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1711..2529) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZF5" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZF5" FT /protein_id="ACF40423.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMVRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEEAISDLEWMDQLSSQQMKEQESRASTSSVQQEQENLLGPEA" XX SQ Sequence 2682 BP; 693 A; 622 C; 667 G; 700 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccggagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtttca caagtgcgat tcattcatgg atccacagaa ctccatcttt 180 gtacagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgtc 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacttgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggag gacaagctgt ggataggagc aatcctatcc ctaatacaca ggcaccacca 420 attcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ctggaataag cggacgacta agaagaagcc 540 ttcttcagct ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aaccgtcccc tccggaggag tatgtgacct 660 catcaacact tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagactcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta cgacaccact cccggcggac aagcgccgac 840 cccacaaacc atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 900 gagccgggag ttgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1200 ccagtaatga ataaaaactc cgttttatta tatctgatga atgctcaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaaacacact ggaacgcagc cccgggctaa agaccgggtc 1320 tcaagagacc ctgcgataca aaacatcgaa aaaacaagat ctatatgaat tacacttcct 1380 ccgtaggagg aagcacaggg ggagaatacc acttctcccc tggcgacatt ttataaatca 1440 tgcagtttgc ctcgaaatac tccagctgcc ctggagtcat ttctttcatc cagtcttcat 1500 cccagttggc gaggatgatt gtaggcttag acttcatctg aactttcttc ttcttgccat 1560 attttggatt taccacgaac tctttctgac agccaactaa ctgtttccaa caaggacaga 1620 atttaaaagg aatgtcatct acgatgttgt agattgcgtc ttcgttgtac gaagaccaat 1680 caacattatt ttgccaataa ttatgaagcc ctaagcttct ggcccaagta gattttcctg 1740 ttcttgttgg accgacgatg tagaggctct gctttcttgt tccttcatct gttggctgga 1800 taattgatcc atccattcaa ggtcagagat agcctcttcg agggtgtaac aggttggttg 1860 aagaagcatg tatgattcgg gactaacctg gaagatgtta ggctggagcc aatctttgat 1920 tgactcatta caaagaagat caggtgaaga gggtggatga ggactgatga actcttcctg 1980 aatctcaggg aacaatttat ttgcagagta ttcaaaatac tgcaattttg tggcccagtc 2040 ataggggaac tctttacgaa ccatagagag gtactctagc tttgaagtgg agtgtgaaat 2100 aatctctctc attatttcat ctttggaagg tttcttttca gaatttccct tggaaggatt 2160 tcctaggaag cttgacttcc taggaatgaa agtacctctc tcaaacaagg ccagaggttc 2220 cttgagaatg taatccctga ccttgtttac tgattttgca ctctgaatgt ttgggtggaa 2280 ccctttgata tcaaagaacc ttgagtcagt gattcttacc ggtttctctg tctggattaa 2340 tgcatgtaaa tgcatatctc catctctatg tgcctctcgg gcacatatga tatactttgg 2400 ggtccaacga ccaacgagct cccaaatcat ctgacagagg atttctggat tttctggaca 2460 gtgtggatat gttaagaacg tgttaacgtt cctgtgtgag aactgacggt tggatgagga 2520 ggaggccata tcggacgact ccgagcagct tgcgggatgg caggatggga gctccaaact 2580 ctatatcaac cggttgcgcc ttcgaaatcc gccgctcccc cttttatagt ggttgtttat 2640 gggccggacc gggccggccc agcaggaaaa gaaggcgcgc aa 2682 //