ID EU628592; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC EU628592; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-MitB-g133-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2686 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2686 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 0a8c93a18bc17de78b1399d7e7fd5282. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-B1_Za-MitB-g133-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.83 S 31.01 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZE7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZE7" FT /protein_id="ACF40415.1" FT /translation="MDPQNSFFVQPRVPTAAPTSGGVSWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQAPPIQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZE8" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZE8" FT /protein_id="ACF40416.1" FT /translation="MSTSKRKRGDDANWNKRATKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1715..2533) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZE9" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZE9" FT /protein_id="ACF40417.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMAEIISHSTSKQEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEDAISDLEWMDKLSSQQMKEQESRAYTSSVQQEQGNLLGPEA" XX SQ Sequence 2686 BP; 693 A; 615 C; 675 G; 703 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccgaagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtctca caagttcgat tcattcatgg atccacagaa ctccttcttt 180 gtacagccgc gggtacccac agcagctccg acatccggag gagtgtcgtg gagtcgcgtt 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggaa tacaagctgt ggataggagc aaccctatcc ctaatacaca ggcaccacca 420 attcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgatgcgaa ctggaataag cgggcgacta agaagaagcc 540 ttcttcagct ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aacagtcccc tccggaggtg tatgtgacct 660 catcaacacc tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagactcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta tgacaccact cccggcggac aagcgccgac 840 cccacaaacg atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatatac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1200 ccagtaatga ataaaaactc cgttttatta tatctgatga atgctcaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaaacacacg caaacaatac aggggggtag tcggcgggcg 1320 gctaagggtg gtgctcggcg ggcaaaacat cgaaaaatca agatctatat gaattacact 1380 tcctccgtag gaggaagcac agggggagaa taccacttct cccccggcga cattttataa 1440 atcatgcagt ttgcctcgaa atactccagc tgccctggag tcatttcctt catccagtct 1500 tcatcccagt tggcgaggat gattgtaggc ttagacttca tctgaacttt ctttttcttt 1560 ccatattttg gatttacaac gaactctttc tgacagccaa ctaactgttt ccaacaagga 1620 cagaatttaa aaggaatatc atctacgatg ttgtagattg cgtcttcgtt gtaagaagac 1680 caatcaacat tattttgcca ataattatga agccctaagc ttctggccca agtagatttc 1740 cctgttcttg ttggaccgac gatgtatagg ctctgctttc ttgttccttc atctgttggc 1800 tggataattt atccatccat tcaaggtcag agatagcatc ttcgagggtg taacaggttg 1860 gttgaagaag catgtatgat tcgggactaa cctggaagat gttaggctgg agccaatctt 1920 tgattgactc attacataga agatcaggtg aagagggtgg atgaggactg atgaactctt 1980 cctgaatctc agggaacaat ttatttgcag agtattcaaa atactgcaat tttgtggccc 2040 agtcataggg gaactcttta cgaatcatag agaggtactc ttgctttgaa gtggagtgtg 2100 aaataatctc tgccattatt tcatctttgg aaggtttctt ttcagaattt cccttggaag 2160 gatttcctag gaagcttgac ttcctaggaa tgaaagtacc tctctcaaac aaggccagag 2220 gttccttgag aatgtaatcc ctgaccttgt ttactgattt tgcactctga atgttggggt 2280 ggaacccttt aatatcaaag aaccttgagt cagtgattct taccggtttt tctgtctgga 2340 ttaatgcatg taaatgcata tctccatctc tatgtgcctc tcgggcacat atgatatact 2400 tcggggtcca acgaccaacg agctcccaaa tcatctgaca gaggatttct ggattttctg 2460 gacagtgtgg atatgttaag aacgtgttaa cgttcctgtg ggagaactga cggttggatg 2520 aggaggaggc catatcggac gactccgagc agcttgcggg atggcaggat gggagctcca 2580 aactctatat caaccggttg cgccttcgaa atccgccgct ccccctttta tagtggttgt 2640 ttatgggccg gaccgggccg gcccagcagg aaaagaaggc gcgcaa 2686 //