ID EU628591; SV 1; circular; genomic DNA; STD; VRL; 2682 BP. XX AC EU628591; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-Mil-g138-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2682 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2682 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 69eb8259d94018b7e1d6a64aaa08acc7. XX FH Key Location/Qualifiers FH FT source 1..2682 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-B1_Za-Mil-g138-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.77 S 30.76 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZE4" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZE4" FT /protein_id="ACF40412.1" FT /translation="MDPQNSFFVQPRVPTTAPTSGGVSWSRVGEVAILSFVALIVFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNSQAPPIQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZE5" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZE5" FT /protein_id="ACF40413.1" FT /translation="MSTSKRKRGDDSNWNKRTTKKKPSSGGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1711..2529) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZE6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZE6" FT /protein_id="ACF40414.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEILCQMIWELVGRWTPK FT YIICAREAHKDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMVRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEEAISDLAWMDELSSQQMKEQESRASTSSVQQGQENLLGPEA" XX SQ Sequence 2682 BP; 696 A; 624 C; 665 G; 697 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccggagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtctaa caagtgcgat tcattcatgg atccacagaa ctccttcttt 180 gtacagccgc gggtacccac aacagctccg acatccggag gagtgtcgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgct ttgattgtct tttacctgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggaa tacaagctgt ggataggagc aaccctatcc ctaattcaca ggcaccacca 420 attcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ctggaataag cggacgacta agaagaagcc 540 ttcttcaggt ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aaccgtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagactcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta cgacaccact cccggcggac aagcgccgac 840 cccacaaacc atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcga attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtca ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1200 ccagtaatga ataaaaactc cgttttatta tatctgatga atgctcaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaaacacact ggaacgcagc cccgggctaa agaccgggtc 1320 tcaagagacc ctgcgataca aaacatcgaa aaaacaagat ctatatgaat tacacttcct 1380 ccgtaggagg aagcacaggg ggagaatacc acttctcccc cggcgacatt ttataaatca 1440 tgcagtttgc ctcgaaatac tccagctgcc ctggagtcat ttccttcatc cagtcttcat 1500 cccagttggc gaggatgatt gtaggcttag acttcatctg aactttcttc ttcttgccat 1560 attttggatt tacaacgaac tctttctgac agccaactaa ctgtttccaa caaggacaga 1620 atttaaaagg aatatcatct acgatgttgt agattgcgtc ttcgttgtaa gaagaccaat 1680 caacattatt ttgccaataa ttatgaagcc ctaagcttct ggcccaagta gattttcctg 1740 tccttgttgg accgacgatg tagaggctct gctttcttgt tccttcatct gttggctgga 1800 taattcatcc atccatgcaa ggtcagagat agcctcttcg agggtgtaac aggttggttg 1860 aagaagcatg tatgattcgg gactaacctg gaagatgtta ggctggagcc aatctttgat 1920 tgactcatta caaagaagat caggtgaaga gggtggatga ggactgatga actcttcctg 1980 aatctcaggg aacaatttat ttgcagagta ttcgaaatac tgcaattttg tggcccagtc 2040 ataggggaat tctttacgaa ccatagagag gtactctagc tttgaagtgg agtgtgaaat 2100 aatctctctc attatttcat ctttggaagg tttcttttca gaatttccct tggaaggatt 2160 tcctaggaag cttgacttcc taggaatgaa agtacctctc tcaaacaagg ccagaggttc 2220 cttgagaatg taatccctga ccttgtttac tgattttgca ctctgaatgt ttgggtggaa 2280 ccctttgata tcaaagaacc ttgagtcagt gattcttacc ggtttctctg tctggattaa 2340 tgcatgtaaa tgcatatctc catctttatg tgcctctcgg gcacatatga tatacttcgg 2400 ggtccaacga ccaacgagct cccaaatcat ctgacagagg atttctggat tttctggaca 2460 gtgtggatat gttaagaacg tgttaacgtt cctgtgtgag aactgacggt tggatgagga 2520 ggaggccata tcggacgact ccgagcagct tgcgggatgg caggatggga gctccaaact 2580 ctatatcaac cggttgcgcc ttcgaaatcc gccgctcccc cttttatagt ggttgttgat 2640 gggccggacc gggccggccc agcaggaaaa gaaggcgcgc aa 2682 //