ID EU628580; SV 1; circular; genomic DNA; STD; VRL; 2682 BP. XX AC EU628580; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-Bar-M3, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2682 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2682 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; b9ac6ed731ee5c7f44b1305fdce7f7fa. XX FH Key Location/Qualifiers FH FT source 1..2682 FT /organism="Maize streak virus" FT /host="Hordeum vulgare" FT /isolate="MSV-B1_Za-Bar-M3" FT /mol_type="genomic DNA" FT /country="South Africa" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZA5" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZA5" FT /protein_id="ACF40379.1" FT /translation="MDPQNSFLLQPRVPTAAPTSGGVSWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZB2" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZB2" FT /protein_id="ACF40380.1" FT /translation="MSTSKRKRGDDANWNKRTTKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1710..2528) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZA7" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZA7" FT /protein_id="ACF40381.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPK FT YIICAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKSVNKVRDYILKE FT PLAVFERGTFIPRKSSFQGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEDAISDLEWMDKLSSQQMKEQESRASTSSVQQELGNLLGPEA" XX SQ Sequence 2682 BP; 698 A; 618 C; 663 G; 703 T; 0 other; taatattacc gcgccttctt tttctgcgag ggcccgtagg gaccgagcga tttgatttaa 60 agttcggttc tgctttgtct gatttatcta aagcagccca atctaaagaa accggtcccc 120 tgcgactata aattgtttca caagtgcgat tcatttatgg atccacagaa ctcctttctt 180 ttacagccgc gggtacccac agcagctccg acatccggag gagtgtcgtg gagtcgcgtc 240 ggcgaggtag ctattttgag ctttgttgga ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggaa tacaagctgt ggataggagc aaccctatcc ctaatacaca ggcaccacca 420 agtcagggga atcccgggcc gtttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgatgcgaa ctggaataag cggacgacta agaagaagcc 540 atcttcagct ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 600 gacactccag catgctgggt ccaccatgat aacagtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatccgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatt gccgtcgact accacttcgt tgcagactcg caagcctgca agtattctaa 780 caccgggacc ggtgtgatgt ggctggtgta cgacaccact cccggcggac aagcgccgac 840 cccacaaacg atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcgg attggttcgg acatccctcc ttcgaatgca agttggaagc cgtgcaagcg 1020 caacatctac ttccacaagt tcactagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg cgatacagag aggagctctg tacatggtta ttgcccctgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1200 ccagtaatga ataaaaactc cgttttatta tatctgatga atgcgaaagc ttacattaat 1260 atgtcgtgcg atggcacgaa aaacacactg gaacgcagcc ccgggctaaa gaccgggtct 1320 caagagaccc tgcgatacaa aacatcgaaa aatcaagatc tatatgaatt acacttcctc 1380 cgtaggagga agcacagggg gagaatacca cttctccccc ggcgacattt tataaatcat 1440 gcagtttgcc tcgaaatact ccagctgccc tggagtcatt tcattcatcc agtcttcatc 1500 ccagttggcg aggatgattg taggcttaga cttcatctga actttcttct tcttgccata 1560 ttttggattt acaacgaact ctttctgaca gccaactaac tgtttccaac aaggacagaa 1620 tttaaatgga atatcatcta cgatgttgta gattgcgtct tcgttgtaag aagaccaatc 1680 aacattattt tgccaataat tatgaagccc taagcttctg gcccaagtag atttcccagt 1740 tcttgttgga ccgacgatgt agaggctctg ctttcttgtt ccttcatctg ttggctggat 1800 aatttatcca tccattcaag gtcagagata gcatcttcga gggtgtaaca ggtaggttga 1860 agaagcatat atgattcggg actaacctga aagatgttag gctggagcca atctttgatt 1920 gactcattac aaagaagatc aggtgaagag ggtggatgag gactgatgaa ttcttcctga 1980 atctcaggga acaatttatt tgcagagtat tcaaaatact gcaattttgt ggcccagtca 2040 taggggaact ctttacgaat catagagagg tactctagct ttgaagtgga gtgtgaaata 2100 atctctctca ttatttcatc ttttgaaggt ttcttttcag aatttccctt ggaaggattt 2160 ccttggaagc ttgacttcct aggaatgaaa gtacctctct caaacacagc cagaggttcc 2220 ttgagaatgt aatccctgac cttgtttact gattttgcac tctgaatgtt tgggtggaac 2280 ccttcgatat caaagaacct tgagtcagtg attcttaccg gtttctctgt ctggagtaat 2340 gcatgtaaat gcatatctcc gtctttgtgt gcctcttggg cacatatgat atacttcggg 2400 gtccaacgac caacgagctc ccaaatcatc tgacagacga tttctggatt ttctggacag 2460 tgtggatatg ttaagaacgt gttaacgttc ctgtgtgaga attgacggtt ggatgaggag 2520 gaggccatat cggacgactc cgagcagctt gcgggatggc aggatgggag ctccaaactc 2580 tatatcaacc ggtttgcgcc ttcgaaatcc gccgctcccc cttttatagt ggttgtttat 2640 gggccggacc gggccggccc agcaggaaaa gaaggcgcgc aa 2682 //