ID EU628572; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628572; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A4_Za-MitC-g129-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 57810fc39037801285824db03c86e2e8. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-A4_Za-MitC-g129-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.83 S 31.01 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B2BX37" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX37" FT /protein_id="ACF40355.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B2BX38" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX38" FT /protein_id="ACF40356.1" FT /translation="MSTSKRKRGDDSNWSKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1717..2532) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZ89" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZ89" FT /protein_id="ACF40357.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKKKAFKDEIMRDIISHATSKEEYLSMIQKELPFD FT WSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYMLL FT QPTCYTLEDAISDLQWMDSLSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2687 BP; 686 A; 635 C; 693 G; 673 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggaccgagcg ctttgattta 60 aagcttggtc ctgctttgta tgatttatct aaagcagccc aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccctgtat 180 tatcagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggtg gacaagctgt ggataggagc aaccctatcc ctaatctacc tgcaccacca 420 agtcagggca atcccgggcc atttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ttggagtaag cgggtgccta agaagaagcc 540 ttcttcagct gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gaccctccag catgctggga ccaccatgat aacggtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatc gccgtcgact accactttgt tgctgacgcg gcagcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcgg tggttgttca acatggagac 960 cgacggtcgg attggttcgg atatccctcc ctcgaatgca agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg ccatccagag aggagccttg tacatggtca ttgcccccgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaacgc ccgttttatt atatctgatg aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaaacaca cgcaaacaat acaggggggt agtcggcggg 1320 cggctaaggg tggtgctcgg cgggcagaac atcgaaaaat caagatctat atgaattaca 1380 cttcctccgt aggaggaagc acagggggag aataccattt ctcccccggc gacataatgt 1440 aaatgatgca gtttgcctcg aaatactcca gctgccctgg agtcatttcc ttcatccaat 1500 cttcatccca gttggcgagg attattgtag gcttagactt cttctgcacc ttcttcttct 1560 taccatactt ggggtttaca atgaaatccc tctgacagcc aactaactgt ttccaacaag 1620 gacagaattt aaacggaata tcatctacga tgttgtagat tgcgtcttcg ttgtatgaag 1680 accaatcaac attattttgc cagtaattat gaacccctag gcttctggcc caagtagatt 1740 ttccggttct tgttgggccg acgatgtaga ggctctgctt tcttgatctt tcatctgatg 1800 actggataga gaatccatcc attggaggtc agaaattgca tcctcgaggg tataacaggt 1860 aggttgaagg agcatgtaag cttcgggact aacctggaag atgttaggct ggagccaatc 1920 attgattgac tcattacaaa gtaaatcagg tgaggagggt ggatgaggat tggtgaactc 1980 ttcctgaatc tcagggaaaa gcttatttgc agagtattca aaatactgca attttgtgga 2040 ccaatcaaag ggaagctctt tctggatcat ggagaggtac tcttctttgg aagtagcgtg 2100 tgaaataatg tctcgcatta tttcatcttt gaaggctttt ttctttacct ctgaatcaga 2160 ttttcctagg aagggggact tcctaggaat gaaagtacct ctctcaaaca cagccagagg 2220 ttccttgaga atgtaatccc tcacccggtt aactgacttc gcactctgaa tatttgggtg 2280 aaacccattt atatcaaaga accttgagtc agatatcctt accggcttct ctgtttggag 2340 caatgcatgt aaatgcaaac ttccatcttt atgtgcctct cgggcacata gaatgtactt 2400 gggaatccaa cgaacgacga gctcccagat catctgacag gcgatttcag gattttctgg 2460 acactttgga taggttagga acgtgttagc gttcctgtgt gagaactgac ggttggatga 2520 ggaggaggcc atagccgacg acggaggctg aggctgaggg atggcagact gggagctcta 2580 aactctatag tatacctgtg cgccttcgaa atccgccgct cccttgtctt atagtggttg 2640 taaatgggcc ggaccgggcc ggcccagcag gaaaagaagg cgcgcac 2687 //