ID EU625351; SV 1; linear; genomic RNA; STD; VRL; 4855 BP. XX AC EU625351; XX DT 23-JUL-2008 (Rel. 96, Created) DT 01-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Tomato infectious chlorosis virus segment RNA2 HSP70-like protein gene, DE partial cds; p6, p59, p9, and CP genes, complete cds; and CPm gene, partial DE cds. XX KW . XX OS Tomato infectious chlorosis virus OC Viruses; Riboviria; Closteroviridae; Crinivirus. XX RN [1] RP 1-4855 RX DOI; 10.1111/j.1365-3059.2008.01959.x. RX AGRICOLA; IND44175915. RA Jacquemond M., Verdin E., Dalmon A., Guilbaud L., Gognalons P.; RT "Serological and molecular detection of Tomato chlorosis virus and Tomato RT infectious chlorosis virus in tomato"; RL Plant Pathol. 58(2):210-220(2009). XX RN [2] RP 1-4855 RA Jacquemond M.; RT ; RL Submitted (09-APR-2008) to the INSDC. RL Unite de Pathologie Vegetale, INRA, Domaine Saint Maurice, Montfavet 84143, RL France XX DR MD5; a183185c1aea236789cbc04835770d17. XX FH Key Location/Qualifiers FH FT source 1..4855 FT /organism="Tomato infectious chlorosis virus" FT /segment="RNA2" FT /host="Lycopersicon esculentum" FT /isolate="Fr" FT /mol_type="genomic RNA" FT /country="France:Nice" FT /collection_date="2003" FT /db_xref="taxon:52135" FT CDS <1..1172 FT /codon_start=3 FT /product="HSP70-like protein" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:B4YNS4" FT /protein_id="ACF42333.1" FT /translation="FPCRRIINEPSAAAVYCVSRYPEYDYFLVYDFGGGTFDVSLIAKY FT KKYVTVVDTEGDSFLGGRDIDMSIDNYLKTKYKLSGNIPAVFLALIKEECNTLGKSSFT FT VILDNGSTAVIEFSPEELRACVVPFAEKSVEILNRVVSRNGLTTGVVFLVGGSSLLKPV FT QSVVKQYSTQIGLTVLIDENMRSAVSYGCSLLHSLEDSGNIIYIDCNSHPLSDLSFNCD FT PSVVVRKPMSIPYKQTMPRKHERQVHTEVNIYEGSDLFCLNNDWLISSKLTSTDYAKVG FT EPYSIIYEYTIDGIIELSIKNEVTGVISKLKNSFEKSSTIEKLELNLTQLSNVDELCTV FT IALLSYRKKELNKLAKLFNIPNMLIQASKNYGDFKILYSMLSRDNSNFK" FT CDS 1172..1333 FT /codon_start=1 FT /product="p6" FT /db_xref="UniProtKB/TrEMBL:B4YNS5" FT /protein_id="ACF42334.1" FT /translation="MLVILVLSDSGRYITHYFSDRSDFSGEELIIFSEDISIVIDLILK FT CPYHKQSW" FT CDS 1327..2880 FT /codon_start=1 FT /product="p59" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:B4YNS6" FT /protein_id="ACF42335.1" FT /translation="MVIMTEDRKAILFFQTLLKKSNVFEEMTEVNNYIKGNLRLVNSNR FT YPSMSRGAPFYFDSEYYLSGGNVVVYPDSHNTYLKLLVVYLDKCYKNYTKKTGYPGKSL FT LTIRDYGSYISRWSDYHDKSITDYLTHNPGVGCVFTNEDISNAYPNQSEITKRILYRIS FT NSIGHMPSLNEFEKSELSSFAIETERDAPVVQNDSNTSQFFKECVNTLRTYLAYSGSSI FT GKAKLDSTKVSYDIFIESLSGDFDRESLKTNPLAISKFMQLYTKIGGNSETFKDKFNTL FT KLMSNPFREFCERAFKINVNSSKDVLYEKIPREKTSDILADVDMFSRILVRTSDYKIES FT NNNTLNSVIDTIVTEALKLFFPRMKGLYPLEIELAFLHYFALSTTNSKRRGDKRKNVIS FT INGEEVQISMNDICNRVDSILREAGAFQSGINYVRKWANKRGHIALNHFKNNRTKLYLF FT SDYPKLLPYMRFDYFKALDIELLTEEERLSLNTLRLITEDKSSHSNDTRADLLSWTLRY FT " FT CDS 2862..3104 FT /codon_start=1 FT /product="p9" FT /db_xref="UniProtKB/TrEMBL:B4YNS7" FT /protein_id="ACF42336.1" FT /translation="MDFEILIKEKSPEIFSVYVNYIINSYYNGLGPTSDLLDLINKNFL FT TFSSRECEIDSCIEDFDIKYYFRCLEYCKNGKLIW" FT CDS 3085..3876 FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:B4YNS8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B4YNS8" FT /protein_id="ACF42337.1" FT /translation="MENLSGNANYDETNTSRVNSDGIGSHMEHDDDDRSVNGPPSDEIN FT NHTTRSVHGRDHTSGNIGDYSKADLNRIMVKVSRPDAMSESDSNLYKEVIVEYLKNNCT FT GGAEPDKVLVVAFFVALCQYALNSGTSVKAISDRTVDLSFGYDNQKYTVKAGHFLSYAQ FT SRTSGHPNALRRFMRSSLETVKQLQDVGLIYSNGVVAAKHGVVKEFRNSYADFDTGHLD FT RMSNDDLAALMLAKCHALKKSEGNSRTIYNTVQLADMKHPC" FT CDS 3884..>4855 FT /codon_start=1 FT /product="CPm" FT /db_xref="UniProtKB/TrEMBL:B4YNS9" FT /protein_id="ACF42338.1" FT /translation="MMEEEISLENRAVKDGLSFNVNIGDKFDREVNLSINLDRVKHFGY FT SYVFVCIGDSSNRYQLGWENITKSSLSFNHLKNGKYENDFSLMRSFTVDFDNNMVVNIR FT LVNNKLAVSQGGRMTNVLCDLPSSLKVELWISFSLDIGNKYVKGKSAIKSVDCSNLISK FT RLVDGVVPQLTSTHSFLKIGSDTSSIKPVKNDVLIEKIKTFEDILVAAVEDHKDIEEDR FT SKYELPDVTSEFQQEDKIKQVRLYDVLDCGDKSFSTLTINAKFKPFKFVDMVNLLQLWY FT GDSKSNNLELLIRYDESQRDRLTLQLMYTKNGRWRMFEEKKVT" XX SQ Sequence 4855 BP; 1617 A; 751 C; 1040 G; 1447 T; 0 other; cgtttccatg caggaggata ataaacgaac catctgccgc tgctgtatac tgtgtcagtc 60 gttatccgga atacgattat ttccttgtat acgactttgg aggaggtact ttcgacgtat 120 cattaatcgc taaatacaag aaatacgtga ctgtggtaga cactgaggga gattctttct 180 taggaggtcg tgatatcgac atgagtatag ataattacct aaaaactaag tacaaattga 240 gtggcaatat acccgctgtg tttttagctt taataaaaga agaatgtaac actctgggga 300 aatctagttt tactgtaata ttagataatg gtagtactgc agttattgaa ttctctcccg 360 aagagttgag ggcttgcgtg gttccgtttg cagaaaaatc agtggaaatt ttaaatagag 420 ttgtgtctag aaatggcctc accaccggag tggtattcct agtaggaggt tcttccttgc 480 ttaaacctgt tcaatcggta gtcaagcaat attccactca gataggtcta accgttttga 540 tcgacgaaaa tatgagaagt gctgtgtcgt acggttgttc tctgttgcat tcgttggaag 600 acagtggtaa tattatttac atagattgca actctcatcc gttgtcagat ctatcattca 660 attgcgatcc tagtgtcgta gttcgaaaac ctatgagtat accatataaa caaaccatgc 720 caagaaaaca tgagagacaa gttcacacag aagttaacat atacgaagga tcagatttgt 780 tttgtctaaa caatgattgg ttgatcagca gtaaactgac gtctacagac tatgctaagg 840 ttggagaacc ttacagcatc atatatgagt atactatcga tggaattata gaattgagca 900 taaagaatga agtgaccggg gtgataagta agttgaaaaa cagtttcgaa aaatccagta 960 caatagaaaa attagaactg aacttaactc aattgtctaa tgtggatgaa ttgtgcactg 1020 taatagcttt gttgtcttac cgtaagaaag aacttaacaa gttagcgaaa ttgtttaaca 1080 ttccaaacat gctgatacag gcaagtaaaa attatggtga tttcaagatt ctctattcta 1140 tgttgtcaag ggacaatagt aatttcaagt gatgttagtg attttagtac ttagtgattc 1200 aggaagatat ataactcatt acttttcgga caggagcgat ttcagtgggg aagagttgat 1260 catttttagt gaggacatca gtatcgtgat agatctaatt ctgaagtgcc cgtaccacaa 1320 gcaatcatgg tgataatgac agaagacaga aaggccattc tatttttcca aacgttactg 1380 aaaaagtcaa acgtgtttga agagatgaca gaagttaata actacataaa aggtaatttg 1440 agattggtta acagtaatag atatccgtct atgtctaggg gagcaccttt ttattttgat 1500 tcggaatatt acttgagtgg tggtaacgta gtagtatatc cagattcaca caacacttat 1560 ctcaagttgt tggtagtgta cttagataaa tgttataaaa actacaccaa gaaaactggg 1620 tacccgggta agagtctttt gacgattaga gactatggtt cttacatctc tcgatggagt 1680 gactatcatg acaagtctat cactgattat ctgactcaca accctggtgt cgggtgtgtg 1740 tttaccaatg aggacatatc aaacgcttat cccaatcaga gtgagataac aaagagaatc 1800 ctgtacagga tcagcaattc cataggtcat atgcctagtt taaatgaatt cgagaaatcc 1860 gaattgagtt cttttgccat tgaaacggag agagatgccc ctgttgttca aaatgactcg 1920 aacacatctc aattcttcaa ggaatgtgtg aacactttgc gtacttatct agcgtattct 1980 gggagtagta tagggaaggc aaaattggat tcgactaagg tgagttatga tatattcata 2040 gagtctttat ctggcgattt cgatagagaa tcattgaaaa ccaatccact cgccatatcc 2100 aaattcatgc agttgtacac aaaaattggt ggtaatagtg aaacttttaa agacaaattc 2160 aacactctca aactgatgag taatccattt agagaatttt gcgagagggc gttcaaaata 2220 aacgtcaata gtagtaagga cgtgttgtat gaaaagatac ctagagagaa aacttcagat 2280 atcttggcag atgtggacat gttttctaga atattggtta gaacttcaga ctataagata 2340 gaatcgaata acaacacatt aaattcggtc atagatacaa tcgtcacaga agcattgaaa 2400 ttgttcttcc cgagaatgaa aggattatat cccctagaga tagaattggc gtttttacac 2460 tattttgctt taagtactac taactcaaaa agaagaggtg ataagagaaa gaacgttatt 2520 tctataaacg gtgaagaagt tcagatatct atgaatgata tttgtaatcg agttgattct 2580 attttaaggg aagctggtgc atttcagagt ggtatcaatt acgtgaggaa gtgggctaat 2640 aagagaggac atattgcttt gaatcatttt aaaaacaatc gcacaaagtt atatctgttt 2700 tctgactacc ctaagttgtt gccttacatg cgattcgatt atttcaaggc gttggatatc 2760 gaattactta cagaagaaga gaggctttct ttaaacactt tgaggttgat taccgaagat 2820 aaaagctcgc attcgaacga cactagagcg gatttgttgt catggacttt gagatattga 2880 tcaaagaaaa atctcctgaa attttttcgg tttacgtcaa ttacataatt aatagttatt 2940 ataacgggtt aggtcctacg tccgatctgt tagatttgat taataagaat tttttgacgt 3000 tttcatcgag agagtgtgag attgattcgt gtattgaaga tttcgatata aagtactact 3060 ttcgttgttt agaatattgt aaaaatggaa aacttatctg gtaatgcaaa ctatgatgaa 3120 actaacacca gtcgtgtaaa ctctgatgga attggaagtc acatggagca tgatgatgat 3180 gacaggtcag tcaacggacc tccaagtgat gagataaaca atcatactac gagatctgtt 3240 catggtagag atcacacgtc aggtaatata ggagattact caaaagctga cttgaataga 3300 attatggtca aggtcagtag accggatgct atgagtgaat ccgatagtaa cttgtataaa 3360 gaggtgattg ttgaatatct gaaaaacaat tgtactggag gtgcggaacc ggataaagtt 3420 ttagtggttg cattttttgt tgcactatgt cagtatgctc tcaactctgg cacttcggtt 3480 aaagcaataa gtgacaggac tgtggatttg agttttgggt atgacaatca aaaatataca 3540 gttaaagcgg gacatttttt atcatatgct caatctagaa cgtcaggtca cccaaacgct 3600 ctaaggagat tcatgcgatc tagtctggaa acagttaaac aactacaaga tgttgggctg 3660 atatattcta atggagtcgt ggccgcgaaa catggggttg tgaaagaatt cagaaacagc 3720 tatgcagact ttgacactgg tcatctagac agaatgtcta acgacgatct ggctgcgttg 3780 atgttagcta aatgtcatgc attgaagaaa tccgaaggta atagtagaac tatatacaat 3840 acggtgcaat tggctgatat gaaacaccca tgctaaacgc aatatgatgg aagaagaaat 3900 atccttagag aatagggcag ttaaggacgg actcagtttc aacgtcaata ttggtgataa 3960 gttcgacaga gaagtcaact tgtctatcaa tttggaccgt gtgaaacatt tcggttattc 4020 ctatgtattc gtatgtatag gcgacagttc taatagatat caattgggat gggaaaacat 4080 cacgaaatcc agtttgtcat ttaaccatct aaaaaatggt aaatatgaga acgacttcag 4140 tttaatgagg tctttcacag tggattttga caacaatatg gtagtcaaca ttagactcgt 4200 caacaacaaa ttggctgtga gtcaaggagg tagaatgact aatgtgttgt gcgatttacc 4260 cagttcactg aaagtagaac tttggatatc cttctcgtta gacataggta ataagtatgt 4320 caaagggaaa tcggctatca aatcagtgga ttgctcaaac ttgatatcga agagattggt 4380 tgatggggtg gtacctcaac tgacttctac acattcgttt ttaaaaatcg gtagtgacac 4440 gagtagcatc aaacctgtaa aaaatgatgt gttaatagaa aaaataaaaa cctttgaaga 4500 tatcctggtc gcagctgttg aagatcataa agacatagag gaagatagat caaaatatga 4560 actacctgac gtaacgtctg aatttcaaca ggaagataag ataaaacaag tgaggttgta 4620 tgacgtgttg gattgtggtg acaaatcttt ctccacttta accattaacg caaaatttaa 4680 gcctttcaaa tttgtagata tggttaactt attgcagttg tggtatggag actcaaaatc 4740 taacaattta gagctgttga tacgttatga tgaatcacaa cgagatagat tgacacttca 4800 actcatgtat actaaaaacg gcagatggag gatgtttgaa gaaaagaagg tgaca 4855 //