ID EU573714; SV 1; circular; genomic DNA; STD; VRL; 2758 BP. XX AC EU573714; XX DT 03-MAR-2009 (Rel. 100, Created) DT 03-MAR-2009 (Rel. 100, Last updated, Version 1) XX DE Tomato leaf curl Gujarat virus - [Dhanbad] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Gujarat virus - [Dhanbad] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2758 RA Kumari P., Chattopadhyay B., Singh A.K., Chakraborty S.; RT "Molecular diversity of begomoviruses associated with tomato leaf curl RT disease in tomato in Dhanbad"; RL Unpublished. XX RN [2] RP 1-2758 RA Kumari P., Chattopadhyay B., Singh A.K., Chakraborty S.; RT ; RL Submitted (19-MAR-2008) to the INSDC. RL School of Life Sciences, Jawaharlal Nehru University, New Mehrauli Road, RL New Delhi, Delhi 110 067, India XX DR MD5; 02f1abff8a1cf1bc8f7d52363a9f9433. XX FH Key Location/Qualifiers FH FT source 1..2758 FT /organism="Tomato leaf curl Gujarat virus - [Dhanbad]" FT /segment="DNA-A" FT /host="tomato" FT /isolate="Dhanbad" FT /mol_type="genomic DNA" FT /country="India" FT /clone="Dhanbad K 2" FT /db_xref="taxon:540029" FT gene 144..491 FT /gene="AV2" FT CDS 144..491 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /note="suppressor of RNAi; may help in viral movement" FT /db_xref="GOA:C0IY46" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C0IY46" FT /protein_id="ACE79026.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTVGYDLIRDL FT ISVIRARNYVEATSRYAHFHARFEGTSPSQLRQPIGEPCCCPHCPRHQSKGMGQPAHVS FT EAQNLQNVQEP" FT gene complement(295..612) FT /gene="AC5" FT CDS complement(295..612) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:C0IY47" FT /protein_id="ACE79032.1" FT /translation="MGQPNSPRNIGQTDHLTHVTNIVLSIERLDLTRTLTALRHIRAPV FT HSVDSGLPIHGPVGPCLCFGDADNGGSSTAHRWAVEVETATYLRSGRENEHICWSLRHN FT F" FT gene 304..1074 FT /gene="AV1" FT CDS 304..1074 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="required for encapsidation and vector transmission" FT /db_xref="GOA:C0IY48" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C0IY48" FT /protein_id="ACE79027.1" FT /translation="MSKRPADMLIFTPASKVRRRLNFDSPSVSRAAAPIVRVTKAKAWA FT NRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPSDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRRFFRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1071..1475) FT /gene="AC3" FT CDS complement(1071..1475) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="replication enhancer protein; enhances efficiency of FT geminiviral replication" FT /db_xref="GOA:C0IY49" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C0IY49" FT /protein_id="ACE79030.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHQNRPFLMNEDI FT ITVQIQFNHNLRKVLGIHKCFLTYRIWMTSQPPTGRFLRVFKTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVDSSHIIKFNIY" FT CDS complement(1216..1620) FT /codon_start=1 FT /product="TrAP" FT /note="trans-activator protein; suppressor of PTGS" FT /db_xref="GOA:C0IY50" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C0IY50" FT /protein_id="ACE79029.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALT FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNRAPKPALPDERRHHHRPDTVQSQP FT EESVGDTQMFPNLPNLDDLTASDWSFLKGI" FT gene complement(1523..2608) FT /gene="AC1" FT CDS complement(1523..2608) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /note="replicase; DNA helicase; essential for viral FT replication" FT /db_xref="GOA:C0IY51" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C0IY51" FT /protein_id="ACE79028.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTFKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDVNDHGVFQVDGRSARGGCQSANDAYAEAINSGSKAQALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMDVYVSPFLSSSFDQVPEELEEWAAENVCSPAARPLRPISIVIEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTTFLCNPGPNSSYKEYLDEEKNSALKNWALKNATFVTLEGPL FT YSGTNQSTAQASQEGNQTSTS" FT gene complement(2158..2451) FT /gene="AC4" FT CDS complement(2158..2451) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="suppressor of PTGS" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C0IY52" FT /protein_id="ACE79031.1" FT /translation="MGLLTCMCSSSSKESSSAKTIDSSTSHPQPGQHISIRTFRELRAQ FT AMSNPTWKKTETSMIMEFSKSMEDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2758 BP; 719 A; 557 C; 633 G; 849 T; 0 other; accggatggc cgcgattttt ttttttggac cccacaatgc actaactgac aaagacatgc 60 ggaccaatca cctgacgcgc tcaaagctta attgttttgc gttttctatt taaacttggg 120 caccaagtat tgtagttcgt actatgtggg atcctttgtt aaacgagttt cctgaaaccg 180 ttcacggttt tagatgtatg ttagcagtta aatatcttca gttagtagaa aagacttact 240 ctcctgatac agtcggttac gatttaatca gggatttaat ttcagttatt agggctagaa 300 attatgtcga agcgaccagc agatatgctc attttcacgc ccgcttcgaa ggtacgtcgc 360 cgtctcaact tcgacagccc atcggtgagc cgtgctgctg cccccattgt ccgcgtcacc 420 aaagcaaagg catgggccaa ccggcccatg tatcggaagc ccagaatcta cagaatgtac 480 aggagccctg atgtgcctaa gggctgtgag ggtccgtgta aggtccaatc gttcgatgct 540 aagaacgata ttggtcacat gggtaaggtg atctgtttgt ccgatgttac gaggggaatt 600 gggctgaccc atcgagtggg taaacgtttt tgcgttaagt ctttgtattt cgtcgggaag 660 atctggatgg acgagaatat taaggtgaag aaccacacca acaccgttat gttttggata 720 gtacgtgata ggcgtcctag tggtactccc agtgattttc agcaggtttt taacgtatat 780 gataatgagc cctctactgc gactgttaag aatgaccagc gtgatcgctt tcaagtctta 840 cggaggtttc aagcgactgt tactggagga caatatgcag ccaaggagca ggcgataatt 900 agaagatttt ttcgtgttaa taattacgta gtttataatc accaggaagc tgggaagtac 960 gaaaatcata ctgagaatgc tttgttgttg tatatggcat gtactcatgc ctctaatcct 1020 gtgtatgcga ctctcaaagt gaggagttat ttctatgact cagtcacaaa ctaataaata 1080 ttaaatttta ttatatgtga actgtctaca aatgttgttt gcgtcaatgc atcccatagt 1140 acataattca ctgctctaat tacattattc aaactaatta cacccaaatt attaagaaat 1200 ttcaacactt gtgttttaaa tacccttaag aaacgaccag tcggaggctg tgaggtcatc 1260 cagattcggt aggttaggaa acatttgtgt atccccaaca ctttcctcag gttgtgattg 1320 aactgtatct ggacggtgat gatgtcttcg ttcatcagga agggccggtt ttggtgctct 1380 gttatcttga aatatagggg attttgaatc tcccagataa acacgccatt ctctgcttga 1440 gctgcagtga tgagttcccc tgtgcgtgaa tccatggtcg tggcaggtta atgctatgaa 1500 gtaagaacag ccacacggta gatcaactcg tcgacgtctg gttcccttct tggctagcct 1560 gtgctgtact ttgattggta cctgagtaga gtgggccttc gagggtgacg aaggtcgcat 1620 tttttaaagc ccagtttttt agtgcagaat tcttttcctc atccaagtat tctttatagc 1680 tggagttggg tcctggattg cagaggaagg tagtgggaat tccgccttta atttgaactg 1740 gcttcccgta ctttgtattt gattgccagt ccctttgggc ccccatgaat tctttaaagt 1800 gctttaggta gtgggggtcg acgtcatcaa tgacgttgta ccaggcatcg ttactgtaaa 1860 cctttgggct aaggtctaga tgaccacaca aataattatg cggtcccaat gatctggccc 1920 acaaagtctt ccccgtccta ctttcaccct caattactat acttatgggt ctcagaggcc 1980 gcgcagcggg actgcagacg ttctcggcag cccactcttc aagttcttct ggaacttggt 2040 cgaaagaaga agataaaaaa ggtgaaacat aaacatccat tggaggtgta aaaatcctat 2100 ctaaattaga atttaaattg tgaaattgta aaacaaaatc tttgggagct ttctccctta 2160 atatattgag ggcctgagct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg 2220 cagattggca acctcctcta gctgatcttc catcgacttg gaaaactcca tgatcattga 2280 cgtctccgtc tttttccatg taggatttga catcgcttga gctcttagct ccctgaatgt 2340 tcggatggaa atgtgctgac ctggttgggg atgtgaggtc gaagaatcta ttgtttttgc 2400 actggaactt tccttcgaac tggatgagca catgcaagtg aggagtccca tcttcgtgaa 2460 gctctctgca aattctaata aattttttga aagttggtgt ttgtagattt aataattggg 2520 aaagtgcctc ttctttagtt agagagcact tgggataagt gagaaaataa tttttggcat 2580 ttattttaaa gcgattgggg gctgccatgt tgacttggtc aatcggtgtc tctcaactct 2640 ctctatgtat cggtgtattg gagtcctata tatatggaga ctccaatggc ataaatgtaa 2700 atattgaact ttaaatcaaa accctaacgc tccaaaaagc ggccatccgt ataatatt 2758 //