ID EU563948; SV 1; linear; genomic RNA; STD; VRL; 7829 BP. XX AC EU563948; XX DT 12-OCT-2008 (Rel. 97, Created) DT 12-OCT-2008 (Rel. 97, Last updated, Version 1) XX DE Tomato torrado virus isolate Wal'03 segment RNA1, complete sequence. XX KW . XX OS Tomato torrado virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Torradovirus. XX RN [1] RP 1-7829 RX DOI; 10.1007/s11262-008-0284-3. RX PUBMED; 18781383. RA Budziszewska M., Obrepalska-Steplowska A., Wieczorek P., Pospieszny H.; RT "The nucleotide sequence of a Polish isolate of Tomato torrado virus"; RL Virus Genes 37(3):400-406(2008). XX RN [2] RP 1-7829 RA Budziszewska M., Obrepalska-Steplowska A., Pospieszny H.; RT ; RL Submitted (13-MAR-2008) to the INSDC. RL Interdepartmental Laboratory of Molecular Biology, Institiute of Plant RL Protection, Wladyslawa Wegorka 20, Poznan 60-318, Poland XX DR MD5; 7a43f5fc41ec4f3ba4b845ad8d3db0b8. DR EuropePMC; PMC2861173; 20229114. XX CC GenBank Accession Numbers EU563947-EU563948 represent the complete CC genome of Tomato torrado virus isolate Wal'03. XX FH Key Location/Qualifiers FH FT source 1..7829 FT /organism="Tomato torrado virus" FT /segment="RNA1" FT /host="Solanum lycopersicum" FT /isolate="Wal'03" FT /mol_type="genomic RNA" FT /country="Poland" FT /db_xref="taxon:370833" FT 5'UTR 1..107 FT CDS 108..6584 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:B6CWG9" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:B6CWG9" FT /protein_id="ACB47566.1" FT /translation="MSFSKMFSGSNSVTEKCATSSSGSFFSELTTSISNFSRTLSNVTK FT VSSQISSHIEDLKPSVTDAASSFTSTCNSVTKLLVKIMTLIEPFIKAYSFVASMYKSIC FT DMVAKIVASIKDKFTLGFNWVLDKSEDVDVLVIAFLIFAISMLIIVFICPSSVLDGVVQ FT MTHIVFNTVGNFFSALYKLDWLPTWSQKFSMMAQANVLPGESMSHSPLSQVVASLIAFG FT ISTLVFVAVPGRPNGLSNPLSKILYSAGSGAQQCNQLFTLFRNMKDCTSQAFSWVLEII FT VDIFGFKNPVLSAISATLSTDLFTWMEEVDAVCDPAHRLENFANPAFTIKLQHLREQAL FT KISAYIATHPVAAFMSHRVTAAIAHLDKIYGENCQHTGVGQYRAEPFMVQWYGASGCGK FT STSMRLFINDVLDRMEEPKLNRLYAVSKRDAYWSNYAHQTAILMDDMGALRDGAGQCQD FT IKDLIDIKSTQPAPLPMAAVEDKGRHFTSRYIFATSNLISAPAQCGLTYPDAFERRRDV FT LVECRKVGEFNTDAPTSHLEFDVVESKRPHAITHRGLSYDDLLEYVVAKCKVHAEISGK FT LYGATSGKVAQVDVSPEEIIASMDMLNIQDTKQDAKLPVVVVSEEDRVAYSQELTVEAL FT KYAYQGSLNPAAYFPYDMHKQAIFDVLSESAKETFTRWVNDMLYQGCCNENYRWLIKNI FT PADYIMHFKSFIYASTINERSFDVQKQLPDGMAHRAIDADVDTLICVEQMPAHVQFLYT FT AFVRYWCRRKMEQPRQSWVVVCYHSIVDYIKNAWYDLPYILRVLIKAGLILIALNGAFG FT AVTAFCACWQSNTFPSAEGRGGITNESNSISSRKNKGKSIFARSLLAQAKGDMLEKWAS FT DDGFINEGLKKNLVVLRLGEGVYFRGTYVCSGWVMTVAHAFSSLRDGTTFSIIHAQSIS FT KVQFNAKTARFLKEQDIVLLNVGNPDGPKPDIRKHFPVRDGVCFSKGTQGVCVRAVASK FT DASQGNLEYLRFNVMMSKGYLEKVTYQMDSSSFKLESQASYEYHMNGENGDCGTLLLLP FT NVQDKQPCIVGIHCASYDEEAAHKGFVASNATAIFRDQLEDLPTGPVKVAMVRCQLLKD FT LRVRDAALFEEKQVAFVGTLPAEQAATVPHKTTLRRSGLFEAFGPAETAPSIISASDKR FT GEGFDPYVAGIQKYNETAQNFDEDIARLAYEGLRQAILPVLHSQRVPFGKPVTQNEDVV FT LNGVDGFDYFDGMELSTSCGYPYNKLGMGTSKREFVEPSGDGDRVQLKRTTPIFDDWEA FT LDVEIRKGNFVELVTTQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSAS FT LMASHNALPCKVGINPGGIEWTLLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLV FT DDYYGSPPGSPDSNARHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFY FT MRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAVYGDDNLVAVPMELQWYTLPAIAQELE FT MVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRGFKRHRLGYVQAPLKWVSIIEPMYWIR FT PSVGCPDALAMLENIDTGVREAFHHGPQVFEKLVTDVQNALKERCFPATTFPTYFELEQ FT DWLVEVTGNPAIGLIKELHIAASAFVPLPPGNTVLNFSDGVHTFADRVSFCSSRTAAAQ FT QWDTTTVLVNCTGAKRPTWVRGPTTWRDFEGLIWPYTMAAIKDHICSIVTKGVIKPHVV FT FVCGNGYAIGPVCAALYCLSTGQYSSQDVVVRLRTIADVTDLSQYPGGCAKYLLKCADT FT REEELADTCKIAQAKGETPAYIPQGGFSLGNFRIVQGRIDLQLAQRLPFTVGPYGGWGQ FT HTTRELKLLLKDMEKIYQILVQRESFITLYFDYLSSEQVMLLVDFLRLQGFFPRQNDVD FT YLLKAFKLSKQRHSKENCHTVYFRKPFLSRKMTMGSKEILSAIAAESLFGMDVSANVLK FT SRLLHLQKPIKCSSMELAFKIYCVIQGHLSKEVVTHFQRMYQQDLTEGIIEKVILWLTA FT TLSESFPVDLVDVPLGLDNIEIQDKGFSLNPNNINMNACDAILFQLTECYNRSTKKHVF FT CRYTTASSLVVAYVLAHRHQTIDELPSFYATHPDVLLLTPILTGYKAP" FT mat_peptide 423..1121 FT /product="protease cofactor" FT /note="Pro-Co" FT mat_peptide 1206..1709 FT /product="helicase" FT mat_peptide 3105..3407 FT /product="protease" FT mat_peptide 4014..4769 FT /product="RNA-dependent RNA polymerase" FT /note="RdRp" FT 3'UTR 6585..7829 XX SQ Sequence 7829 BP; 2079 A; 1595 C; 1858 G; 2297 T; 0 other; ttaaaagagt tattttgaga atataaccta cgtcgttatt cacagaccaa gtctctgtta 60 atcaaaatct cccttttaaa actcattcta cttttacatt tggcaacatg tctttttcca 120 agatgttctc cggttccaac tcagttactg aaaagtgcgc taccagctcc tctggttctt 180 tcttttcaga gcttactact agtattagta atttctcccg cactctgtcc aatgttacca 240 aggtttcatc tcaaatttct tctcacattg aagatttgaa gccttcggtt acagatgctg 300 cttcttcctt taccagcacc tgtaactctg ttactaaatt gttagttaag ataatgactt 360 taattgaacc cttcatcaag gcttactctt ttgtcgcatc catgtacaaa tcaatttgtg 420 atatggttgc aaagattgtt gcaagcatca aagataagtt cacacttggt tttaactggg 480 tgttggacaa atctgaggat gtggatgttt tagttatagc ttttcttatt tttgcaattt 540 ctatgttaat aattgttttc atttgtccaa gtagtgtact agatggagtt gtacagatga 600 ctcacatagt ttttaataca gtaggtaact tcttttcagc tttgtataaa ttagattggt 660 taccgacatg gtcccaaaag ttttcaatga tggcacaagc caatgttcta ccaggggaat 720 ccatgtcaca ctcaccactt tcacaagtgg tagcatccct catagccttt gggatttcta 780 cccttgtgtt cgtggctgta cctggtagac ccaatggtct atccaacccg ctatcaaaaa 840 ttctgtactc agcgggaagt ggtgctcaac agtgcaatca attgtttacc ctgttcagga 900 atatgaaaga ttgtacttcc caggcctttt cctgggttct ggaaataata gtagacattt 960 ttggttttaa gaatccagtt ttgtctgcta ttagtgccac attgtccacg gacttattca 1020 cgtggatgga agaagtggat gcagtgtgtg atccagcaca tcgcttggaa aattttgcaa 1080 accctgcatt cactatcaag ctccaacatc taagggagca ggctcttaaa atctctgctt 1140 acattgctac acatcctgta gcagccttca tgagccacag ggtaacggca gcaatagccc 1200 atcttgacaa gatatatggg gagaactgcc agcacactgg cgtgggccaa tacagggcag 1260 aaccttttat ggttcaatgg tatggtgcca gtggttgtgg gaaatccacc agcatgcggc 1320 tgttcatcaa tgatgttttg gaccgcatgg aagagccaaa gttgaacagg ctctatgctg 1380 tgagtaagcg agatgcttac tggtcaaatt atgcccatca aactgctatt ctgatggatg 1440 acatgggcgc tctgagagat ggggcagggc aatgccagga cattaaggat ttgatagata 1500 tcaaatccac tcaaccagcc cccttgccca tggcagcagt ggaggataaa ggccgccact 1560 ttacctcccg atacatattt gccacatcca accttatctc agctcctgct cagtgtggtc 1620 taacctaccc cgatgctttt gagagaagac gggatgttct tgtggagtgt aggaaggtgg 1680 gtgagtttaa cactgatgct cccacttctc accttgaatt tgatgtggtt gagagcaaaa 1740 gaccccatgc aataacacac aggggtttga gctatgatga tttgctggaa tatgtggttg 1800 ccaagtgcaa ggttcatgca gaaatctcag ggaaactgta tggcgccaca tcaggcaagg 1860 tggcacaggt tgatgtgtca cctgaggaaa taatagcatc catggatatg ttgaatatcc 1920 aagataccaa gcaggatgct aagcttcccg tggttgttgt aagcgaagag gatagggtgg 1980 cctactctca ggagttgaca gtggaagctt tgaaatatgc ttatcagggt agtctgaatc 2040 ccgcagcata tttcccttat gacatgcaca aacaggccat atttgatgtg ctaagtgaat 2100 ccgccaaaga aacattcacc aggtgggtta atgacatgct gtatcaaggt tgctgcaatg 2160 agaactatcg ctggttgata aagaatatcc cagctgatta tatcatgcac tttaagagct 2220 tcatctacgc ttccacaatc aatgagcgta gctttgacgt tcagaagcag ctgcctgatg 2280 gaatggcgca ccgtgccata gatgctgatg tggacacact gatatgcgtg gagcagatgc 2340 ctgcccacgt acaattcttg tacacagcat ttgtgaggta ttggtgccgc agaaagatgg 2400 aacagcctag gcaatcctgg gtggtagttt gctaccacag tattgtggat tatatcaaga 2460 atgcttggta tgatttaccg tacatcttga gagttctgat taaggctggc cttattttaa 2520 ttgcactcaa tggtgcattt ggggctgtca cagcattctg tgcttgttgg caatccaaca 2580 ctttcccttc agcagaagga agaggaggga ttaccaacga gtcaaatagc atctccagcc 2640 ggaagaacaa gggaaagagc atctttgctc gatctttgct ggcacaagcc aagggtgata 2700 tgctggagaa atgggcaagt gatgatggct tcatcaatga aggattgaag aaaaacctag 2760 tcgtcttgag actaggtgaa ggtgtctact tcagaggcac ctatgtctgc tcgggctggg 2820 tgatgacggt ggctcatgct ttttcaagcc tccgtgatgg cacaactttt tcaataatac 2880 atgcccagtc aatttccaag gtgcaattca atgctaaaac tgcacggttc ttgaaggagc 2940 aagatattgt cctgctcaat gttggaaacc ccgatggtcc caaacctgat attcgcaaac 3000 actttcctgt acgggatggt gtttgttttt ctaagggtac tcaaggggta tgtgtgagag 3060 cagtagcatc aaaggatgct tcgcaaggaa atcttgagta cttgcgtttt aatgtgatga 3120 tgtccaaggg ttaccttgaa aaggtaacgt accagatgga ctccagttcc tttaaactgg 3180 agtctcaagc atcttatgag taccatatga atggtgaaaa tggtgattgt ggtactcttc 3240 ttcttttgcc caacgtgcaa gacaagcaac catgtattgt gggtattcat tgtgcttctt 3300 atgatgaaga agctgcgcac aaagggtttg tagcatccaa tgctacagct attttccgag 3360 atcagttgga agatcttccg actggtccgg ttaaagtagc aatggtaagg tgccagcttc 3420 ttaaggatct acgagtcagg gatgcagctc tttttgaaga aaaacaggtg gcttttgttg 3480 gcacattgcc agctgaacaa gcagccacgg ttccccacaa aacaacgctg cgaaggagtg 3540 gcttgtttga agcttttggg cctgcagaaa ctgctccatc tatcatttca gcttcagaca 3600 aacgtgggga aggttttgat ccgtatgtgg ctggcataca aaaatataat gaaacagcac 3660 aaaattttga tgaggacatt gcgaggctag cctatgaagg gctacgtcaa gcaattttgc 3720 ctgtgctgca ctcccagcga gttccttttg gaaagcccgt cacacagaat gaagatgtgg 3780 tgctcaatgg tgttgatggg tttgactatt ttgatgggat ggagttgagt acctcttgcg 3840 ggtatccgta caacaagttg ggtatgggca ctagcaagag agagtttgtg gagccaagtg 3900 gagatggaga tcgagtccaa ctcaaaagga ccactccaat ttttgatgac tgggaggctt 3960 tggatgtgga aattcgcaaa ggaaactttg tggaactggt caccacccaa tgtgccaaag 4020 atgagcgctt gccgctggaa aaggtttttg ggaagcggaa aacccgtttg tttgaaattc 4080 ttccttttca ttacaatatg ttggttagga agtatttcct ggatttttcc gccagtctga 4140 tggcatccca caatgctctg ccatgcaagg tgggcattaa tcctggaggt attgaatgga 4200 ctctgttggc caatggcttc agagcagtct ctgatacagg attttctgct gactattcca 4260 gttttgatgg gagagctccc atctttgcct ttcaatggtt ttgtgatctt gtggatgact 4320 actatggatc acctcctggt tctccagact ccaatgccag acatgtgctt cttatgatgg 4380 cttcatgcca ttatactatt tgtgagaaca aggtttttag gttggtggga ggtatgcctt 4440 caggatttgc actcaccgtt atcttcaact ctcttctcaa tgagttttat atgcgctatg 4500 catttatttc tctattgaga agaccacata tagcagctca agctataggg tgcaaaccct 4560 ctgatttcaa caagctattt gtggcagtct atggtgatga caatctagtt gcagttccca 4620 tggaattgca gtggtatact ctgccagcta ttgcccaaga attggagatg gtgaatgtta 4680 ttataaagaa tggcatcgac aagaacatgg atgttagcag ttccaaaatg ctagacttgt 4740 ctgagctaac atttctaagc agaggtttta aaaggcaccg tctaggatac gttcaagctc 4800 ctctgaaatg ggtatctatc atagaaccaa tgtactggat aaggccttct gttggttgtc 4860 ccgatgctct cgctatgttg gaaaacatag acacgggagt tagagaggca tttcaccatg 4920 ggcctcaggt ttttgaaaag ttggtgacag atgttcaaaa cgctctcaag gagcggtgtt 4980 tcccagccac cacatttcct acatattttg aattggagca ggattggctg gtggaggtta 5040 caggaaatcc agccattggg ctcatcaagg aacttcatat tgcagcttca gcttttgtgc 5100 ctctgccccc aggcaatact gttctgaatt tttctgatgg agtgcatact tttgctgacc 5160 gagtgagctt ctgctcctcg cgaacagctg ctgcacagca gtgggacacc accactgttt 5220 tggtgaactg cactggggca aagagaccca catgggtaag agggcccacc acatggaggg 5280 actttgaagg gcttatttgg ccttacacaa tggctgcaat caaggaccac atctgcagca 5340 ttgtaaccaa aggggtgatc aagccacatg tggtttttgt ttgtggcaat gggtatgcta 5400 ttggtccagt gtgcgctgca ttgtactgtc tgtccactgg ccaatattct tctcaggatg 5460 ttgttgtgag attgagaacc atagcagatg ttacagatct cagtcaatat ccaggaggtt 5520 gtgccaagta tcttctgaaa tgtgctgata caagagaaga agagcttgca gatacatgta 5580 aaattgcaca agccaagggt gagacaccag catacatacc tcaaggagga ttttcccttg 5640 gtaatttcag aattgtgcaa gggagaattg atctacagtt ggctcagcgc ttgcctttta 5700 cagtgggacc ttatggggga tggggtcaac acactactag agagcttaag ttgctgctca 5760 aggacatgga gaagatatat caaattttag tccaaagaga gagtttcatc actctctact 5820 ttgactatct cagttcagag caggtgatgt tgttggttga ctttcttagg ctccaagggt 5880 tttttcctcg ccaaaatgat gtggattact tgcttaaagc ctttaagctg agcaagcaaa 5940 ggcacagtaa ggaaaactgt catacggttt actttagaaa gccttttctc tcaaggaaaa 6000 tgaccatggg gtccaaagaa attctgtctg caatagctgc tgagtcattg tttggtatgg 6060 atgtttccgc taatgtgctt aagagtaggc tgcttcatct ccagaagccc ataaagtgtt 6120 catccatgga gttggccttt aaaatttatt gtgtcatcca gggccatctg agcaaggaag 6180 ttgtaactca cttccaacgc atgtaccaac aagatctgac agaagggatc atagagaaag 6240 tgatattgtg gttaaccgcc acactgtcgg agagctttcc agtggatctt gttgatgtac 6300 ctttaggctt ggataacata gagatccagg ataaaggttt ttccctaaat ccaaataata 6360 ttaatatgaa tgcatgtgat gccatcttgt ttcaactcac tgagtgttac aaccggtcaa 6420 caaagaaaca tgtgttctgt cgctacacga ctgcatcctc tcttgttgtt gcctatgtgc 6480 ttgcacacag acatcagaca attgatgagt tgccgtcctt ctatgcaaca cacccagatg 6540 tgttgctttt gacaccaatc ctaacaggct acaaagcgcc ttgagtcggg ctaaatgact 6600 cagcttgtac atgcaatatg tgtactgtga ataatattgc atgaggatta acggagagta 6660 ctgacttttg ttagtcggga gtccgaccca ctatatgggt acctgtgaat ctacacgggt 6720 taggagattt gcacgcctct ccataaatgt ggttcgtgta ccctgcttgg ttagacagcc 6780 ttccacgccg gaagtaaaat ggcctagtgt gatggtgtat atcactaacg gagagtactg 6840 actttaacta gttgggagtc cggctccatt tggagtacca atgaatctac attggttaaa 6900 gagatttgca cgcctctctt taaatatgga tcgtgtaccc tgcttggtta gaaagtacct 6960 ttacttaggt ttacaaagta cggggagcac tccctggtta acatagtgca ggtgctatcc 7020 catgatagtc ctttaactca agggttgagt tcggtttgca tcttttgccg tgatgaaaga 7080 tgaggtagct tcccccttat tgggaggctg aaactacaca tatgtagtgg gtttgactga 7140 gtcctataat cagtccgttt gaaattcgat aattttccgt agcttgcgtc aagctgctca 7200 cgttaggggc gtgagtgaag atgcgccgta ccacgtcttc cccggcaatg ccagtggttc 7260 agagcgggcc ctcagaatag aggttaaaac tagtgtgatg gtgtatatca cgataaaaag 7320 tgacacccgg gttgtgctgc gcctagttaa cacgagcaca ggtcccaccc tatagtggaa 7380 gaaacttggt tgagttttaa aagaacaacc cgtttgagcg acgacaaagt tccgtagctt 7440 gcgacaagct gtttgtgtta ggggcacaaa tgaagttata gcataccact tcttccctag 7500 gttcgtccag tggcttcaca gtgctatcct cagaaaagag gttaaatcta gtgtgatggt 7560 gtatatcacg ataaagaatg acacccggga tgtgcttctc ctagttaact cgagcacggt 7620 tttcacacca cagtgaaact atcttactgc tttaaatgtt gtttgtttgt tttacttgtt 7680 ttattgtgtg tttaatatca tgcatatttg ctgttgaagg ttctgtcgat gaggtcaaat 7740 ggatactcgg gaactacagt aactttgcat ttgaattgtt ttcaattcag tgtgtgagtt 7800 tgaatatgta ttttaaaaaa aaaaaaaaa 7829 //