ID EU563947; SV 1; linear; genomic RNA; STD; VRL; 5404 BP. XX AC EU563947; XX DT 12-OCT-2008 (Rel. 97, Created) DT 12-OCT-2008 (Rel. 97, Last updated, Version 1) XX DE Tomato torrado virus isolate Wal'03 segment RNA2, complete sequence. XX KW . XX OS Tomato torrado virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Torradovirus. XX RN [1] RP 1-5404 RX DOI; 10.1007/s11262-008-0284-3. RX PUBMED; 18781383. RA Budziszewska M., Obrepalska-Steplowska A., Wieczorek P., Pospieszny H.; RT "The nucleotide sequence of a Polish isolate of Tomato torrado virus"; RL Virus Genes 37(3):400-406(2008). XX RN [2] RP 1-5404 RA Budziszewska M., Obrepalska-Steplowska A., Pospieszny H.; RT ; RL Submitted (13-MAR-2008) to the INSDC. RL Interdepartmental Laboratory of Molecular Biology, Institiute of Plant RL Protection, Wladyslawa Wegorka 20, Poznan 60-318, Poland XX DR MD5; 26eecb206f52cd3d66e195739752acea. XX CC GenBank Accession Numbers EU563947-EU563948 represent the complete CC genome of Tomato torrado virus isolate Wal'03. XX FH Key Location/Qualifiers FH FT source 1..5404 FT /organism="Tomato torrado virus" FT /segment="RNA2" FT /host="Solanum lycopersicum" FT /isolate="Wal'03" FT /mol_type="genomic RNA" FT /country="Poland" FT /db_xref="taxon:370833" FT 5'UTR 1..181 FT CDS 182..745 FT /codon_start=1 FT /product="Orf1" FT /db_xref="UniProtKB/TrEMBL:B6CWG7" FT /protein_id="ACB47564.1" FT /translation="MSFISRLNTSLEEEAFHKQVADSQWVCSVDTGSGIINSDPTLDFK FT ICPKTGGAISVLSVSWQNNSPQLVPGHYLLRSGTWPITGVKLSGLLVHRSIRLETTRKL FT LEAQRISVSQQASSSSAAGAAGKQPQVTLTQLQEELDEAKTRLALKEKELLEALSEISK FT LRLQLSNQPSNDDVFSGWTEEGPK" FT CDS 702..4298 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B6CWG8" FT /protein_id="ACB47565.1" FT /translation="MMMSSVAGQRRGPSDKSAAVSEQLIAQITAAVEAGNKNLLRKLGM FT GSFGILYGAQEKKAMELFDPEDVHNITSLWSSFKKTFTSSRDHGNLFFHLYGVMFFMVP FT HVHGGEGSVKISLCSSNDPTNPVLQEKVLYFSGGAQAVLMSPTITLPFIKRGPMFYYTM FT ECLGTRAQIPCSVVAIWKQKIDIRSAIYSKQETMSWAIEALHRPQFFQDRQEAAQYISS FT VYSNATSSATDSVLPFVGAQLGDTKMNVPSEARMIRSSSLRVPMLKVQSKRFSSMEIPS FT TSTAHLLGTTRDETVIQEESRHEEEGDDGVLFPVKKAQGLNYSHVWDNLGIESFVDVEL FT PENWDELSVRQQVAAAMIAFANKGVCLVPKHIINRDKHNIHLENITENHYLVILERYGI FT VNAGSLARTENWYNLTLAQRVEELIYQRDDAYFMLGDNTNPYPPFDCYDGLTLKVRSEL FT ERVAKEQARQRFYKEAAKAQVKNKVAQTSVEEIPSTSFATKVAMESGSVDSMKIAIQAE FT AANEAVRPNEVMFEFGQEMNNEGATELELQQPACVASNSFFNVGVFEFAWKKSSSVAAE FT VLSLALPAALFGKSKEMSMGSQMLKYYDAALIMYKVILYISGMGAISGQLALVWDECNV FT LNRKKEFINIASLYASKHRLVSASEQSSGEFCFTPTGIGKFVPLDPASGAYDLGSIRVF FT VTHPLASATELESIPCHIHLQCKVLSTNIMQPPRLRAQAQFGMKPDQTHFPRFPTNQVL FT LHYNWGVAASMGTTLVSIFSPSGIYESDGTLQPSLLGNIARNCKWWTGTCVFEICIEKT FT QFHSGSLAIGLGTLNTSMSTPHDILNMPHVICNLEMGRKFYFRCTITNWNGKNLLTTGR FT KSSLPRPKHMSHMRLFATVLKPLVSTSIHLDTVGVTVQLKCIEDLVLGGTVSVKPIYGH FT WTKGKNAVDFLFSEMDLSQRKEIEKLRKENVETFDEKGKKQPQVQVPLRDKFSYGAVQY FT FVMNWKDEERLLVLPCAPWSVRFPQGALVQEAITCPFIDWCSSFCYWSGSLEYTIIVHR FT VQTSNNIGGVLNITLDSSGYPFPLGISKGAYVVSAGGGAKWAFTYGMSDNIFSFVVHDD FT EFFPRRHTKARAVDPNASRIMTLQDRLGNLIINLPAKDVISSLEILVKPGPDFKLQLAQ FT APSANHEKHLGDMQTHTYLYTPDFSELRSFEN" FT mat_peptide 810..1463 FT /product="3A protein" FT mat_peptide 2148..2885 FT /product="coat protein Vp35" FT mat_peptide 2898..3608 FT /product="coat protein Vp26" FT mat_peptide 3645..4295 FT /product="coat protein Vp23" FT 3'UTR 4299..5404 XX SQ Sequence 5404 BP; 1492 A; 1110 C; 1278 G; 1524 T; 0 other; tttaaaagaa taattttata caatatttat gtgatccaag ccatcacgga acctacgtcg 60 ttcctaagat attgtatcaa ttatctttgc tgttaccatt ttgagtgcac cgtcaactga 120 aggaacctac gccgttccca aggacagtgt atcttttgtt atttattttg gttacatctc 180 tatgtcattt atttctcgtt tgaatacatc tcttgaagag gaggcatttc acaagcaagt 240 tgcagactct cagtgggtgt gttcggttga tacaggctct ggcataataa acagtgatcc 300 aactctagac ttcaagattt gtcccaagac aggtggagca atttctgttc tatctgtttc 360 gtggcaaaac aatagccctc aactggttcc tggccattat ctactgcgaa gtggaacttg 420 gccaattact ggtgttaagc tatctggctt actagttcat agatcaattc gtttggaaac 480 caccaggaaa cttttagaag ctcagaggat ttctgtatcc cagcaagcat cttcttcctc 540 cgctgctggt gctgcaggaa aacaaccaca agtaacgctt acacagttac aagaggagct 600 tgacgaggcc aaaactcgct tagctctcaa agagaaagag ttacttgaag ctctatccga 660 aatatccaaa ttaagattgc aattgtccaa ccaaccaagt aatgatgatg tcttcagtgg 720 ctggacagag gaggggccca agtgataaaa gtgcagctgt atctgagcaa ttaattgctc 780 agattacagc tgcagtcgaa gcaggcaaca aaaacctgct tcgcaaactg ggcatgggtt 840 catttgggat tctctatggc gcccaagaga agaaagccat ggagctgttt gaccctgagg 900 atgtacataa tataacctca ttgtggtctt cgtttaagaa aactttcact tcctcgaggg 960 atcatggaaa tctattcttc catttgtatg gagttatgtt tttcatggtt cctcatgtac 1020 atggtgggga aggtagtgta aaaattagtt tatgttccag taatgatcca accaatcctg 1080 ttctgcagga gaaggttttg tatttttccg ggggggcaca ggcagtgtta atgagtccga 1140 ccattacact accttttatt aaaagaggcc ccatgttcta ctacacaatg gagtgccttg 1200 gcactcgggc tcaaattcct tgctcagtag tggccatttg gaaacaaaag attgatatcc 1260 gtagtgccat ttactcaaag caagaaacaa tgtcttgggc tattgaggct cttcaccgac 1320 ctcaattttt ccaagacaga caggaggcag cacagtacat atcatcagta tattctaatg 1380 ctacctcctc agcaactgat tcagtgcttc cgtttgtggg agcacagctt ggcgacacaa 1440 agatgaatgt gccaagcgaa gcaagaatga tccggtcctc ctcgctccgg gtgcccatgc 1500 tcaaggtgca gagtaagcgg ttttcctcaa tggaaatacc atctacctca actgcacacc 1560 tccttggcac aacgcgtgat gaaactgtaa tacaggagga aagtaggcac gaagaggagg 1620 gtgatgatgg ggttttgttc cccgttaaaa aggctcaagg tctgaactat tcccatgtgt 1680 gggataatct tggtattgag tcctttgtag atgttgagct gcccgaaaac tgggatgagc 1740 tgtcggtgag acagcaagtt gctgcagcaa tgatagcatt tgcaaacaag ggtgtttgct 1800 tggtcccaaa acatataatc aaccgggaca agcacaatat ccacttggag aatatcaccg 1860 agaatcacta cttggtgata ctggaaaggt acggcattgt gaatgccggc tctctggcca 1920 gaactgaaaa ctggtacaat cttaccttgg cacagagagt ggaagaactg atttatcaaa 1980 gggacgatgc atacttcatg cttggtgata ataccaaccc atatcctccc tttgattgtt 2040 atgatggctt aacgctcaaa gttcgcagtg agctagagcg tgtggcaaag gagcaggcgc 2100 gccaaagatt ttacaaggag gcggccaagg ctcaggtgaa aaacaaggtg gcccaaacta 2160 gtgtggaaga aataccatcc acctcattcg ccacaaaggt tgccatggag agtggcagtg 2220 tggatagcat gaaaattgct attcaagctg aagctgccaa tgaagctgta aggcccaatg 2280 aagttatgtt tgaatttggg caagaaatga ataatgaagg tgcgacggag ctggaattac 2340 aacaaccagc ctgcgtggcc agtaactcct tcttcaatgt tggagttttt gagtttgcat 2400 ggaagaaaag cagttctgtt gctgctgagg tgctatcact ggcgctccct gcggctctct 2460 ttggtaaatc caaggagatg tcaatgggat cgcaaatgtt aaagtattat gatgccgcat 2520 taattatgta caaggtcatc ttgtatattt ccggcatggg tgcaatttcg ggtcagctgg 2580 ccctggtttg ggatgagtgc aatgtgctca acagaaagaa ggagttcatc aacattgcct 2640 ctctgtatgc cagcaaacat aggctggttt cagcatctga acagagtagt ggggaatttt 2700 gttttacacc tacgggtatc ggcaaattcg ttccacttga tccagcctcg ggggcttatg 2760 atctgggtag catacgggtg tttgtgacgc accccttggc tagtgctact gaattggaga 2820 gcataccttg tcacatccat ctgcagtgta aagtgttgtc gaccaacatc atgcagcctc 2880 ctcgtttgcg agcacaggca caatttggta tgaaaccaga ccagacacac tttccacgat 2940 ttccaacaaa tcaggtactg ttacactaca attggggagt ggctgctagc atgggtacta 3000 ccctagttag catcttctct ccgtcaggca tatatgaaag tgacggtacg ctgcaaccat 3060 ccttgcttgg aaacatagca cgcaattgca aatggtggac tggcacttgc gtgtttgaga 3120 tttgcattga aaagactcag ttccattctg gtagtttggc cattggactg ggtacactga 3180 acacaagcat gtccacccct catgacattt taaatatgcc gcatgttatt tgtaaccttg 3240 agatgggacg aaagttctat ttcaggtgta cgataaccaa ttggaatggg aaaaatcttt 3300 tgaccactgg tcggaagagt tctctaccgc ggcccaagca tatgtctcac atgaggttgt 3360 ttgctacagt cttgaaaccc ctggtatcaa cttcaataca tctagatacg gtcggggtaa 3420 cagtgcagct taaatgcata gaagatttgg tccttggggg cactgtgtct gttaaaccca 3480 tttacggaca ctggactaaa ggaaagaatg ctgtggactt cctattctct gagatggact 3540 tgtctcagcg taaagaaatt gagaaattac gcaaggaaaa cgttgagaca tttgatgaga 3600 aaggaaagaa gcagccacag gtacaagtgc cgctcaggga caagttttca tatggggctg 3660 tacaatattt tgtgatgaat tggaaggacg aagagcgact gttggtatta ccatgcgcac 3720 cttggtccgt aagattccct cagggggcac tggtacagga ggccatcaca tgcccattca 3780 ttgattggtg ctcttccttt tgttattggt caggaagtct tgaatacacc attattgtac 3840 atagagtgca gacttccaat aacataggag gagtgctgaa catcacctta gattcatcag 3900 ggtacccttt tcctcttgga atctcaaagg gcgcctatgt tgtctctgct ggtggaggag 3960 caaaatgggc tttcacttat ggtatgagcg acaacatctt ttcttttgtg gtgcatgatg 4020 atgagttttt ccccagacgc cataccaaag ccagagcagt agatccaaat gcttcaagaa 4080 taatgactct gcaagatcgt ctaggaaatc tcataataaa tttaccagcc aaagatgtga 4140 taagctctct ggagatcttg gtcaagccag ggcctgattt caaattgcaa ctggctcaag 4200 ctccttcagc aaatcatgag aagcatttgg gtgatatgca aacgcatacc tacctttata 4260 ctcctgattt ttcagaacta aggagttttg aaaattaact atcctgtacg tgatatagga 4320 gccgtgagtc cggcatgtga ctcatcatgt gcagttaaca tgtgtactgt gaataatgtt 4380 aactgtaagg atagttaatt ttaacggaga gtactgactt taactagttg ggagtccggc 4440 tccatttgga gtaccaatga atctacattg gttaaagaga tttgcacgcc tctctttaaa 4500 tatggatcgt gtaccctgct tggttagaaa gtacctttac ttaggtttac aaagtacggg 4560 gagcactccc tggttaacat agtgcaggtg ctatcccatg atagtccttt aactcaaggg 4620 ttgagttcgg tttgcatctt ttgccgtgat gaaagatgag gtagcttccc ccttattggg 4680 aggctgaaac tacacatatg tagtgggttt gactgagtcc tataatcagt ccgtttgaaa 4740 ttcgataatt ttccgtagct tgcgtcaagc tgctcacgtt aggggcgtga gtgaagatgc 4800 gccgtaccac gtcttccccg gcaatgccag tggttcagag cgggccctca gaatagaggt 4860 taaaactagt gtgatggtgt atatcacgat aaaaagtgac acccgggttg tgctgcgcct 4920 agttaacacg agcacaggtc ccaccctata gtggaagaaa cttggttgag ttttaaaaga 4980 acaacccgtt tgagcgacga caaagttccg tagcttgcga caagctgttt gtgttagggg 5040 cacaaatgaa gttatagcat accacttctt ccctaggttc gtccagtggc ttcacagtgc 5100 tatcctcaga aaagaggtta aatctagtgt gatggtgtat atcacgataa agaatgacac 5160 ccgggatgtg cttctcctag ttaactcgag cacggttttc acaccacagt gaaactatct 5220 tactgcttta aatgttgttt gtttgtttta cttgttttat tgtgtgttta atatcatgca 5280 tatttgctgt tgaaggttct gtcgatgagg tcaaatggat actcgggaac tacagtaact 5340 ttgcatttga attgttttca attcagtgtg tgagtttgaa tatgtatttt aaaaaaaaaa 5400 aaaa 5404 //