Dbfetch
ID EU523359; SV 1; linear; genomic RNA; STD; VRL; 1900 BP. XX AC EU523359; XX DT 21-APR-2008 (Rel. 95, Created) DT 21-APR-2008 (Rel. 95, Last updated, Version 1) XX DE Southern rice black-streaked dwarf virus isolate Hainan segment S9, DE complete sequence. XX KW . XX OS Southern rice black-streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-1900 RA Zhou G.-H., Xu D.-L., Li P., Zhang S.-G.; RT "A new Fijivirus infecting rice in south China and its genomic S9 and S10 RT sequence analysis"; RL Unpublished. XX RN [2] RP 1-1900 RA Zhou G.-H., Xu D.-L., Li P., Zhang S.-G.; RT ; RL Submitted (26-FEB-2008) to the INSDC. RL Plant Pathology Department, South China Agricultural University, Wushan, RL Guangzhou, Guangdong 510642, China XX DR MD5; 995983abd259e542ff8cd93ffffba668. DR EuropePMC; PMC4015479; 24131521. DR EuropePMC; PMC4379580; 25807053. XX FH Key Location/Qualifiers FH FT source 1..1900 FT /organism="Southern rice black-streaked dwarf virus" FT /segment="S9" FT /host="rice" FT /isolate="Hainan" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:519497" FT 5'UTR 1..52 FT CDS 53..1096 FT /codon_start=1 FT /product="hypothetical protein" FT /db_xref="InterPro:IPR009268" FT /db_xref="UniProtKB/TrEMBL:B2LHU4" FT /protein_id="ACC60252.1" FT /translation="MADLERRTFGSYKIEELTIRNDQPTRNTNLSLSQSTENRLSTKKI FT PLLDDGIFELLNYFIDGTNFNKTCYCGFNYSHLPNLERDFNIASLYVRENFEICTDQLD FT LANYVRQPNISIKSPDFTVCLEYVLKIVVESESSTKDQKDDESQRPTSTDSTKNEQEKK FT FVEMSLLPLLNRESEESLTEEILEGEGAVVNVLKLFIKGFLMHLGENPNSYDRQLTVEK FT YRPLLVSIVGYEYLVGTTVPEKKINHIYYQLATFDNYPFDLLRFQLSSLISTPTSILER FT IAKEGLFKIITPSTLRGATRQTVLFRGINGSESFLNIKRYRRFRTRIVGNADSVIKSDF FT SSLKLDV" FT CDS 1160..1789 FT /codon_start=1 FT /product="hypothetical protein" FT /db_xref="GOA:B2LHU5" FT /db_xref="InterPro:IPR009650" FT /db_xref="UniProtKB/TrEMBL:B2LHU5" FT /protein_id="ACC60253.1" FT /translation="MNPQSSVNIDTYTFNCPFELAKIQIESAKPIMQDFSDFDEIFERP FT LSDSELDDRVEKLELDIEAKVDPVVRRKYGKVGHIMLMIFSFLFFGIFKLTLKMFYHLF FT RCVCCNPLIRGIFSVVCTVVFYIVIFTIIYLVYFFFGDQILAVYHSLTEMSDSGLINST FT KIEEKVNNIIHEGSLFFGSVDPNTGHLQEVEKQVFNGGTVNYTLFH" FT 3'UTR 1790..1900 XX SQ Sequence 1900 BP; 589 A; 332 C; 324 G; 655 T; 0 other; aagtttttta agcctggaac tgacacattc ctgcaggaac gaacgcaaga gaatggcaga 60 cctagagcgt agaacgtttg gatcatataa aatagaagaa ttgacaatta gaaacgacca 120 accaacaaga aatacaaacc tttcactttc tcaatcgacc gagaatcgtc tttcaaccaa 180 gaaaattccc ctactcgacg acggcatttt tgaacttttg aactacttca ttgatggaac 240 caatttcaac aaaacgtgtt attgtggatt taattattct catctcccaa atctagaacg 300 tgactttaac atcgcttctt tgtatgtacg tgaaaatttc gaaatttgca cagatcaatt 360 ggacttggct aactacgttc gacaaccgaa catcagcatt aaatctcctg acttcacagt 420 ttgtttggaa tacgttttga aaattgtcgt tgaaagcgaa tcctcaacta aagaccaaaa 480 agatgatgaa tcacagagac ccacctccac tgattcaact aagaatgagc aagaaaagaa 540 gtttgttgaa atgtctttgc ttcctctgtt aaatcgcgaa tctgaagaat ctttgactga 600 agaaatttta gaaggtgaag gcgcagtggt aaacgtactt aaactattca ttaaaggatt 660 tttgatgcat ttaggtgaga atccaaattc ttatgatcgt caactaaccg ttgaaaaata 720 tcgtccatta ttggtttcta ttgttggcta tgaatatcta gtcggtacta cagttcctga 780 aaagaaaatc aatcatattt attatcaact tgcaactttt gataattacc cattcgatct 840 tttaaggttt caactttctt cactaatttc cactccaact tcaatattgg aaagaatagc 900 aaaagaaggt ttgtttaaaa ttattacacc aagcactttg cgaggtgcca cacgtcaaac 960 tgttttgttc agaggtatca acggtagtga gtcatttttg aacatcaaaa gatatcgtcg 1020 ttttagaacc agaattgttg gtaatgctga tagcgttatt aagtccgact tttcttcact 1080 taaattggac gtttgatact ttacttcttg gtcaatttca ttgtatatca atggttgaag 1140 aatttttctt ttctacatta tgaacccaca gtcttcagtt aatattgata cgtatacctt 1200 caactgtccc tttgaattag caaaaatcca aattgaatcc gcgaaaccaa ttatgcaaga 1260 ttttagtgat tttgatgaaa tttttgaacg tcctttgtct gattcggaat tggatgatcg 1320 agttgaaaaa ttggaattag atattgaagc caaagtcgat cctgtggtaa gaagaaaata 1380 cggtaaagtt ggtcatataa tgttaatgat ttttagcttt cttttctttg ggatttttaa 1440 attaacgctt aaaatgtttt atcatctttt tcggtgtgta tgttgtaatc ctttaattcg 1500 aggaattttt agtgttgttt gtactgtagt tttctacata gtcattttta cgattattta 1560 tttagtttat tttttctttg gtgatcaaat ccttgctgta tatcattctt tgaccgagat 1620 gagcgattct ggtttaatca actccaccaa aatcgaagaa aaggttaaca acatcattca 1680 cgaaggttct ttattttttg gttccgttga tcctaatact ggccaccttc aagaagtcga 1740 aaaacaagtg ttcaatggag gtactgtaaa ttatactttg tttcactaag tttctatttt 1800 atgtgactct gaaaatattc acgctcgtaa gtcgattttc ttgcagttgt gtatacgcta 1860 cccaacaaat tcgttctcaa gccggcttac agctgatgtc 1900 //