ID   EU518935; SV 1; circular; genomic DNA; STD; VRL; 2596 BP.
XX
AC   EU518935;
XX
DT   19-MAR-2008 (Rel. 95, Created)
DT   08-MAY-2018 (Rel. 136, Last updated, Version 2)
XX
DE   Potato yellow mosaic virus isolate Valle del Cauca segment A, complete
DE   sequence.
XX
KW   .
XX
OS   Potato yellow mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2596
RA   Martinez A.K., Morales F.J.;
RT   "Molecular characterization of a begomovirus affecting tomato in the Cauca
RT   Valley, Colombia, and identification of sources of resistance to improve
RT   the local variety Unapal Maravilla";
RL   Unpublished.
XX
RN   [2]
RP   1-2596
RA   Martinez A.K., Morales F.J.;
RT   ;
RL   Submitted (25-FEB-2008) to the INSDC.
RL   International Center for Tropical Agriculture, Km. 17 Recta Cali-Palmira,
RL   Palmira, Colombia
XX
DR   MD5; ec9b1d7a46dd4bb0f7f86f58db75762c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2596
FT                   /organism="Potato yellow mosaic virus"
FT                   /segment="A"
FT                   /isolate="Valle del Cauca"
FT                   /mol_type="genomic DNA"
FT                   /country="Colombia"
FT                   /db_xref="taxon:10827"
FT   CDS             167..922
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="AV1"
FT                   /db_xref="GOA:B1Q042"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:B1Q042"
FT                   /protein_id="ACB05661.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRNANYSPRSGIGPRINKAAEWVNRPMY
FT                   RKPRIYRTLRTPDVPRGCEGPCKVQSFEQRHDILHTGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFRLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHRFYGKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSIIN"
FT   CDS             complement(919..1317)
FT                   /codon_start=1
FT                   /product="replication enhancer"
FT                   /note="AC3"
FT                   /db_xref="GOA:B1Q043"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:B1Q043"
FT                   /protein_id="ACB05662.1"
FT                   /translation="MDSRTGELITARQAENGVFIWEIENPLYFKINRVEDISYTRTRVY
FT                   HLQIRFNHNLRRALDLHKAYLNFQVWTTSMTASGSTYLARFRQLVLMYLDQLGVISINN
FT                   VIRAVRFATDRSYVNDVLENHSIKYKFY"
FT   CDS             complement(1064..1453)
FT                   /codon_start=1
FT                   /product="transcriptional activator protein"
FT                   /note="AC2"
FT                   /db_xref="GOA:B1Q044"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:B1Q044"
FT                   /protein_id="ACB05663.1"
FT                   /translation="MQSSSTSQPPSIKKAHRQAKRRAIRRRRIDLNCGCSIYFHIDCAG
FT                   HGFTHRGAHHCTSGREWRVYLGDRKSPVFQDKPSRGHIIHQNQGVPPPNQVQPQPQESV
FT                   GSPQSLPELPSLDDIDDSFWVDLFS"
FT   CDS             complement(1395..2450)
FT                   /codon_start=1
FT                   /product="truncated replication-associated protein"
FT                   /note="AC1"
FT                   /db_xref="GOA:B1Q045"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B1Q045"
FT                   /protein_id="ACB05664.1"
FT                   /translation="MPRKGSFSIKAKNYFLTYPQCSLSKEETLSQLQNLTIPVNKKFIK
FT                   ICRELHENGEPHLHVLIQFEGKFNCTNNRLFDLVSPTRSTHFHPNIQGAKSSSDVKSYV
FT                   EKDGDTIEWGMFQIDGRSARGGQQTANDAAAEALNSGTKEEAMKIIKEKLPEKFLFQYH
FT                   NLSSNLDRIFMVTPAPWVPPFPLSSFTNVPDVMQEWADDYFGRGAAARPERPISIIIEG
FT                   DSRTGKTMWARVLGPHNYLSGHLDFNSRVFSNNVEYNVIDDIAPHYLKLKHWKELLGAQ
FT                   RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKAFLEKEDNASLKNWTLKNAVFVNLT
FT                   ATLYQESTQAS"
FT   CDS             complement(2036..2293)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:B1Q046"
FT                   /protein_id="ACB05665.1"
FT                   /translation="MGNLISTFLSSSKGNSTAQTTDCSIWYPQPGQHISIRTFRELNRA
FT                   PMSSHTSRKTETPLNGECSRLMEEVLEAVNKQLTTQLPKH"
XX
SQ   Sequence 2596 BP; 660 A; 569 C; 610 G; 757 T; 0 other;
     accggatggc cgcgcttttt tcctcttatg ggccttactt gtagtgggct ttaatttggc        60
     ccaatcatag tctgtctgac aatcctagat aagtggaaat acttgggcgt taaggtgctc       120
     atgatctata aattaaagcc ttttggccca ctatctttaa ctcaaaatgc ctaagcgcga       180
     cgctccatgg cgttcaatgg cgggaacctc aaaggttagc cgcaacgcta attattctcc       240
     ccgttcagga attgggccaa gaataaacaa ggccgctgaa tgggttaaca ggcccatgta       300
     caggaagccc aggatttatc ggacgctgag gacgcctgac gttccaagag gctgtgaagg       360
     gccttgtaag gtccagtcat tcgagcagcg acatgacatc ttacacactg gtaaggtaat       420
     gtgtatatct gacgttaccc gcggtaacgg tattacccac cgtgtcggta agcggttttg       480
     tgtcaagtcc gtttacatat tagggaagat atggatggac gagaacatca agctgaagaa       540
     ccacaccaac agcgtcatgt tccggctggt tagagatcga agaccgtatg gtacgcctat       600
     ggattttgga caagtgttca acatgttcga caacgagcct agcaccgcca ccgttaagaa       660
     cgatcttcgt gatcgttacc aggtcatgca taggttctat ggcaaggtca caggtggtca       720
     atatgcaagc aacgagcagg cgattgtgag gcggttttgg aaggtcaaca atcacgttgt       780
     ctacaaccac caagaagctg gcaagtacga gaaccatacg gagaacgccc tattattgta       840
     tatggcatgc actcatgcct caaaccctgt atatgcaacg cttaagattc ggatctattt       900
     ttatgattcg atcataaatt aataaaattt gtattttatt gaatggttct ctagtacatc       960
     atttacatat gatcgatctg ttgcaaaacg aacagctcta attacattgt taattgaaat      1020
     aacacctaac tgatctaagt acataaggac taactgtcta aatctagcta aataagtcga      1080
     cccagaagct gtcatcgatg tcgtccagac ttggaagttc aggtaggctt tgtggagatc      1140
     caacgctctc ctgaggttgt ggttgaacct gatttggagg tggtacaccc tggttctggt      1200
     gtatgatatg tcctctactc ggtttatctt gaaatacagg ggattttcta tctcccagat      1260
     aaacacgcca ttctctgcct gacgtgcagt gatgagctcc cctgtgcgtg aatccatgtc      1320
     cggcgcagtc aatgtggaag tatatggagc acccgcagtt taaatcaatg cgtctccttc      1380
     taatggccct cctcttagct tgcctgtgtg ctttcttgat agagggtggc tgtgaggttg      1440
     acgaagactg cattctttag agtccagttt ttgagagacg cattatcttc tttctcgagg      1500
     aaagctttat agctggaacc ctcgccagga ttgcagagca cgattgatgg gatccctcct      1560
     ttaatttgaa caggctttcc gtacttgcaa tttgattgcc agtccctttg ggccccaagt      1620
     agttctttcc agtgctttag ctttagataa tgcggtgcga tgtcatcaat gacgttatat      1680
     tcaacgttat tcgaaaagac cctagaattg aaatcaagat gaccactcaa gtaattatgt      1740
     gggcctaaga cccgtgccca cattgtcttc cccgttctag agtcaccttc aatgataata      1800
     ctaataggtc tttctggccg cgcagcggca ccccttccaa aataatcatc tgcccactct      1860
     tgcatcacgt cgggaacgtt cgtgaaagag gagagtggaa acggagggac ccatggtgcc      1920
     ggagtcacca tgaaaatcct atcgaggtta ctggataggt tatgatactg aaaaagaaac      1980
     ttttccggca acttctcttt gatgattttc atggcttctt ccttcgttcc agagtttaat      2040
     gcttcggcag ctgcgtcgtt agctgtttgt tgaccgcctc gagcacttct tccatcaatc      2100
     tggaacattc cccattcaat ggtgtctccg tctttctcga cgtatgactt gacatcggag      2160
     ctcgatttag ctccctgaat gttcggatgg aaatgtgttg acctggttgg ggataccaga      2220
     tcgaacaatc tgttgtttgt gcagttgaat ttcccttcga actggataag aacgtggaga      2280
     tgaggttccc cattctcgtg aagttctctg cagatcttga tgaatttctt gttcactggg      2340
     atagttaggt tttgaagttg ggaaagtgtc tcctctttgc taagagagca ttggggatat      2400
     gtaaggaaat aatttttggc tttaatagag aacgagcctt tgcgtggcat ttttgtaaat      2460
     aagaatgttc ccccgatatg ttccccctat tgctctggct ctcaaaactc ttatgaattg      2520
     ggggaactgg gggaacatat atagtagaag gtcctatggt tagattcgcc acgtggcggc      2580
     catccgttat aatatt                                                      2596
//