ID EU495235; SV 1; linear; mRNA; STD; VRL; 2922 BP. XX AC EU495235; XX DT 21-APR-2008 (Rel. 95, Created) DT 17-JUL-2008 (Rel. 96, Last updated, Version 2) XX DE Peru tomato mosaic virus isolate Cuzqueno2 polyprotein mRNA, partial cds. XX KW . XX OS Peru tomato mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2922 RX DOI; 10.1007/s00705-008-0132-8. RX PUBMED; 18553171. RA Janzac B., Fabre M.-F., Palloix A., Moury B.; RT "Characterization of a new potyvirus infecting pepper crops in Ecuador"; RL Arch. Virol. 153(8):1543-1548(2008). XX RN [2] RP 1-2922 RA Janzac B., Moury B.; RT ; RL Submitted (18-FEB-2008) to the INSDC. RL Plant Pathology, INRA, Domaine St Maurice, Montfavet F-84143, France XX DR MD5; c7d58ef66b87f01deb68f3c6838806ab. XX FH Key Location/Qualifiers FH FT source 1..2922 FT /organism="Peru tomato mosaic virus" FT /host="Capsicum annuum" FT /isolate="Cuzqueno2" FT /mol_type="mRNA" FT /country="Chile" FT /collection_date="2006" FT /db_xref="taxon:187978" FT CDS <1..2496 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:B2LAW2" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B2LAW2" FT /protein_id="ACC60230.1" FT /translation="LDNVLWGSLKLTKSTPTGMFKTTKMIEDLIATKESEVHEQGRNTS FT WMLEALKDNLQAVAYMKSQLVTKHVVKGECLLFKQYLEQDPHAKEFFQPKMWAYGMSLL FT NKEAYIKDLMKYSKPIEVGVVDCSAFEEATCRVIMYMRQKGFRQCTYVTDEEEIFKALN FT MNAAVGAMYGGKKKDYFAGYSSQDKEQILRESCKRLYPGELGVWNGSLKAELRCKEKIE FT ANKTRTFTAAPIDTLLAGKVCVDDFNNQFYSRNIDCCWTVGMTKFYGGWDKLLRALPDG FT WTYCDADGSQFDSSLTPYLINAVLAIRYAFMEEWDIGFKMLQNLYTEIIYTPISTPDGT FT IVKKFRGNNSGQPSTVVDNSLMVVLAMHYCFVKAKIPFHEIDSMCKFFVNGDDLIIGVS FT PKAEYLLDEMGKQFSDLGLNYDFSSRTKDKTQLWFMSHRGLMVEGLYIPKLEEERIVSI FT LQWDRAALPEYRLEAICAAMIESWGYPKLTYEIRRFYQWILQHEPYAQLAQEGKAPYIS FT ELALKKLYLNVEVDSEELNAYLKFFTEIDDELECDSDEVYHQAKDDSGTLDAGKDQAKD FT KAAKTVATAGESSVKKSDEKDVNAGTSGTFSVPRIKAISEKMRQLKANGVSALNFEHLL FT LYKPSQIDISNARATQSQFDNWYSEVQKAYDVEAAEMGTILNGLMVWCIENGTSPNVNG FT VWTMMDGEEQVEFPLKPVVENAKPTFRQIMAHFSDVAEAYIEMRNKSEPYMPRYGLVRN FT LRDMSLARYAFDFYEITSRTSVRAREAHIQMKAAALKTAQTRLFGLDGGISTQEENTER FT HTTEDVAPNLHTMLGVRNM" FT mat_peptide <1..120 FT /product="Nia proteinase" FT /note="nuclear inclusion a protein; NiaPro" FT mat_peptide 121..1677 FT /product="Nib replicase" FT /note="nuclear inclusion b protein; Nib; RNA-dependent RNA FT polymerase; RdRp" FT mat_peptide 1678..2493 FT /product="capsid protein" FT /note="coat protein; CP" FT 3'UTR 2497..>2922 XX SQ Sequence 2922 BP; 893 A; 503 C; 707 G; 819 T; 0 other; ctagacaatg ttttgtgggg ctcactaaag cttacaaaga gcacacctac aggaatgttc 60 aaaactacca agatgataga ggacctcatt gcaaccaagg agagtgaagt ccatgagcag 120 gggagaaaca caagctggat gttagaggct ttgaaggaca acctccaagc tgtggcctac 180 atgaagagtc agctcgtcac caagcatgtt gttaaaggag aatgcttgtt atttaagcag 240 tatcttgagc aggatccaca tgcgaaagaa ttctttcaac caaagatgtg ggcatatggg 300 atgagtcttc tcaacaaaga agcatacata aaggatctga tgaaatactc taaacccata 360 gaagttgggg tggttgattg cagtgctttc gaggaagcca cctgtagggt cattatgtac 420 atgaggcaaa agggatttag gcaatgcaca tatgtaacag atgaagaaga gattttcaaa 480 gcactaaata tgaatgctgc agttggtgcc atgtacggtg gtaagaaaaa ggactacttt 540 gctggatata gttcacaaga taaagagcaa atcttacgag agagctgcaa gcgtttgtat 600 cctggagaac ttggagtatg gaatgggtca ctaaaagcag agcttcgatg caaggagaag 660 attgaagcaa acaaaacacg aacctttaca gcagccccaa tcgacacatt attggctggt 720 aaagtttgtg ttgacgactt caataaccaa ttctacagta gaaatattga ttgttgttgg 780 accgttggga tgactaagtt ttatggtggt tgggataaat tgttgagagc attgccagat 840 ggatggacat actgtgatgc tgatggatct caatttgata gttctttaac tccatacctg 900 attaatgctg ttttggcaat tcgatatgct ttcatggagg aatgggacat cggtttcaag 960 atgttgcaaa atctttacac agagattatc tacactccca tttccacacc agatggaacc 1020 atagtcaaga agtttagagg taacaatagt ggtcaacctt caacagttgt ggacaattca 1080 ctcatggttg ttctagctat gcattattgc tttgtgaaag ccaaaattcc attccatgaa 1140 atcgactcaa tgtgtaaatt ctttgtgaat ggagacgatt tgataattgg tgtttcccca 1200 aaagctgaat acctgctgga tgaaatggga aaacagtttt cagaccttgg tttgaattat 1260 gacttttcat cccgcacaaa ggataagaca caactttggt tcatgtcgca tcgtggttta 1320 atggttgaag ggctctacat tccaaagctt gaagaggaaa gaattgtgtc aattctccag 1380 tgggacagag ctgctttgcc tgaatataga ttggaggcaa tttgtgctgc catgatagaa 1440 tcttggggtt acccaaagtt aacatatgaa ataaggagat tctatcagtg gatactccaa 1500 catgaaccat atgcccaatt ggcacaagag ggtaaggcac catacatatc tgaattggcg 1560 ctcaagaagt tgtacttaaa tgttgaagtt gactctgagg aactgaatgc atatttgaag 1620 ttctttacag agattgatga tgaattagaa tgtgattcag atgaagtgta ccatcaagct 1680 aaagatgata gcggcacact tgatgcgggt aaagatcaag caaaagataa agctgctaaa 1740 actgttgcaa ctgccggaga atcctcagtt aagaagtcgg atgagaagga tgttaatgct 1800 ggtacttctg gtacttttag tgttccaaga atcaaggcta tttctgagaa gatgcgtcaa 1860 ctaaaggcga atggtgtgag tgcactgaat tttgaacatt tactgcttta taagccaagt 1920 cagatagaca tttccaatgc tagagccact caaagtcagt ttgataattg gtactctgaa 1980 gtacaaaagg cgtatgatgt agaagcagct gaaatgggca caattctgaa tggtctcatg 2040 gtttggtgta tagagaatgg aacctcaccg aatgttaatg gggtttggac aatgatggat 2100 ggtgaggaac aagttgaatt tccgctaaag ccagtggtgg aaaacgcaaa gcctactttt 2160 aggcaaatca tggcacattt ttcagatgtt gccgaagcgt atattgaaat gcgcaacaag 2220 agtgagccgt atatgccacg atacggtttg gtgagaaatt tgcgagatat gagtttggct 2280 cgttatgcat ttgatttcta tgagatcacg tctcgcacat ccgtccgagc aagagaagct 2340 cacatccaga tgaaagcagc agctcttaag actgctcaaa ctcgtctgtt tggattggat 2400 ggtggcataa gtacacaaga ggaaaacaca gagaggcata ccactgagga tgtggccccc 2460 aatctgcata ccatgcttgg agtcagaaac atgtaactga gtgcctttat tctgggatga 2520 aatataaata tatatagtat gtagtatata ttttggcttt tcctgttcta gctttaatta 2580 catcgtttac taagtatata gttaattgga taatctttac aggggtagcc atttgacaca 2640 ccatcacttg ggtaaactct gtatagaaag tttctttcgt tttacatggg gtggctcggc 2700 gacacactca tcgaggtgaa ctcatgttag cttaactgta cggcagttgg ggtggcccgg 2760 tgacacactc attggggtga actcactgct gggattcaat tggggtggcc tggtgacaca 2820 ctcatcaggg tgaactcatt ggattctatt ttagtatttc gtaatattaa agattcctga 2880 caaggcgaga gtggcttgtg tttgctgtgg tgaggtttta cc 2922 //