ID EU487041; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC EU487041; XX DT 11-MAR-2008 (Rel. 95, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 2) XX DE Squash leaf curl Philippines virus isolate P133, complete genome. XX KW . XX OS Squash leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M.U., Green S.K., Kenyon L., RA Jan F.J.; RT "Distribution and genetic diversity of begomoviruses infecting tomato and RT pepper plants in the Philippines"; RL Ann. Appl. Biol. 158(3):275-287(2011). XX RN [2] RP 1-2748 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT "Molecular identification of Solanaceae- and Cucurbitaceae-infecting RT Begomoviruses in the Philippines"; RL Unpublished. XX RN [3] RP 1-2748 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (13-FEB-2008) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX DR MD5; 2694dab5cbdb5be75ff610d949c424cf. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Squash leaf curl Philippines virus" FT /segment="DNA-A" FT /host="pumpkin" FT /isolate="P133" FT /mol_type="genomic DNA" FT /country="Philippines:Batangas" FT /isolation_source="plant with mosaic symptom" FT /db_xref="taxon:269277" FT misc_feature join(2584..2748,1..118) FT /note="intergenic region" FT gene 119..457 FT /gene="V2" FT CDS 119..457 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B1PRA2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B1PRA2" FT /protein_id="ACA61083.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDL FT ILVLRAKNYVEATSRYYHFNSRVEGTPTSQLRQPLCFPCSCPHCPRHKGKGLDKQADEQ FT KTQDVQNV" FT gene 279..1049 FT /gene="V1" FT CDS 279..1049 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B1PRA3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B1PRA3" FT /protein_id="ACA61082.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNSYIVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1046..1456) FT /gene="C3" FT CDS complement(1046..1456) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B1PRF2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PRF2" FT /protein_id="ACA61086.1" FT /translation="MITDSRTGEYITADRAESGVYIWEVPNPLYFKIMKHDIRPCLEEH FT DIIKVHIMFNHNLRKALGLHKCVLMFQIWTGLRPPTGIFLRVFKTQVLKYLEMLGVIGI FT NNVIRAVYHVLDNVLEKTIDVWTTYDVKLNIY" FT gene complement(1191..1595) FT /gene="C2" FT CDS complement(1191..1595) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B1PRF3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PRF3" FT /protein_id="ACA61085.1" FT /translation="MQSSSHSKNHSIPVAKKSLPQKKKKNIRRRRIDLPCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRVYLGSSKSPLFQNNETRHQTLPGRTRHNQSAHHVQPQP FT EESTGASQMCSNVPDLDGLTPADWDFLESL" FT gene complement(1498..2583) FT /gene="C1" FT CDS complement(1498..2583) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PRF4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PRF4" FT /protein_id="ACA61084.1" FT /translation="MPQPRRFRISAKNYFVTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT NKDGDTIEWGKFQVDGRSARGGQQSANDTAAKALNSGSAEAALAIIREELPKEFIFQYH FT NIKANLDRIFAPPVEVYVSPFSISSFDKVPQELVDWVSGNVVCSAARPIRPIGIVLEGD FT SRTGKTAWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNPGPNSSYKEYLDEDKNAALKQWALKNAIFITLEEPL FT YSGREKIATAEEEEEHQAQTN" FT gene complement(2169..2426) FT /gene="C4" FT CDS complement(2169..2426) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PRF5" FT /protein_id="ACA61087.1" FT /translation="MGALISTFLSSSRGSSCAQITDSSTWCPQVGQHISIRTFRELNPA FT PMSSPISTRMETPLNGENSRSTAEVLEAVSSLLTTLPQRH" XX SQ Sequence 2748 BP; 736 A; 591 C; 616 G; 805 T; 0 other; accggatggc cgcgcttttt tttatgtggg ccctcgacca atgaaattca cgctacatgg 60 cttatttatt gcgcggggac cattaaatag acttccgcac caagttttga tccacaacat 120 gtgggatcca ctgttgcacg aattccctga aagtgttcat ggtctaaggt gcatgctagc 180 tgtgaaatat cttcaggagg tggaaaagac atattcgccg gacacagtcg gctacgatct 240 tgttcgcgat ctcattcttg ttctccgcgc aaagaactat gtcgaagcga ccagccgata 300 ttatcatttc aactcccgcg tcgaaggtac gccgacgtct caacttcgac agcccctatg 360 tttcccgtgc agttgtcccc attgcccgcg tcacaaaggg aaaggcctgg acaaacaggc 420 cgatgaacag aaaacccaag atgtacagaa tgtatagaag tcccgacgtg ccaaggggct 480 gtgaaggccc ttgtaaagtt caatcgttcg aatctaggca cgatgtctct catattggta 540 aggtaatgtg tatcagcgat gtcacacgag gaaccggact cacacatcgc gtcggaaagc 600 gattttgtgt gaaatctgtt tatgttttgg gaaagatatg gatggatgaa aatatcaaga 660 cgaaaaatca cactaatagt gtcatatttt ttttggttcg agaccgtcgt cctacaggga 720 ctcctcagga ttttggggag gtttttaata tgtttgacaa tgaaccgagc actgcaacgg 780 tgaagaacat gcatcgtgat cgataccaag tgctgcgcaa atggcatgcc actgtgacgg 840 gaggaacata cgcatcaagg gagcaagcat tagttaggaa gtttgttaga gttaatagtt 900 acattgtcta caaccaacaa gaggccggca agtatgagaa tcatactgaa aatgcattaa 960 tgttgtatat ggcctgtact catgcatcga accctgtata cgcgactttg aaaatccgga 1020 tctattttta tgattcggta acaaattaat agatattcaa tttcacatca tacgttgtcc 1080 atacatcaat tgtcttttcc aatacattgt ccagaacatg ataaacggct cttattacat 1140 tgttaatacc aatcacccct aacatttcca agtacttcag gacttgggtt ttaaagactc 1200 tcaagaaaat cccagtcggc gggcgtaagc ccgtccagat ctggaacatt agaacacatt 1260 tgtgaagccc cagtgctttc ctcaggttgt ggttgaacat gatgtgcact ttgattatgt 1320 cgtgttcttc caggcaaggt ctgatgtcgt gtttcattat tttgaaatag aggggatttg 1380 gaacttccca gatatacacg ccactctctg ctcgatccgc agtgatgtac tcccctgtgc 1440 gtgaatccgt gatcatggca atttattgac atgtaatacg agcatccgca cggtagatca 1500 attcgtctgc gcctgatgtt cttcttcttc ttctgcggta gcgatttttt cgcgaccgga 1560 atagagtggt tcttcgagtg tgatgaagat tgcattcttt aatgcccact gttttaatgc 1620 tgcattctta tcttcatcaa gatattcttt ataactgcta tttggtcccg gattgcagag 1680 gaagatggtg ggaattccac ctttaatcat gactggcttt ccgtatttcg tgttgctttg 1740 ccagtctctt tgggccccca tgaattcttt aaaatgcttt agatagtggg gatctacgtc 1800 atcaatgacg ttgtaccacg catcattact gtacactttt gggcttagat ccagatggcc 1860 gcacaagtaa ttgtgcggtc ccaaagaacg cgcccacgca gttttacccg ttctactatc 1920 accctctaaa actattccta tgggtctaat tggccgcgca gcggaacaca ccacattacc 1980 tgaaacccaa tcgacgagtt cttgcggaac tttgtcgaag gatgaaatag aaaacggaga 2040 aacatacacc tctacaggag gtgcaaaaat cctatctaaa ttagctttaa tattgtggta 2100 ttgaaaaata aattctttcg ggagttcttc tctaattatt gctaaagctg cttcggctga 2160 acctgaattt aatgcctttg cggcagtgtc gttagcagac tgctgaccgc ctctagcact 2220 tctgccgtcg acctggaatt ttccccattc aatggtgtct ccatccttgt tgatatagga 2280 cttgacatcg gagctggatt tagctccctg aatgttcgga tggaaatgtg ctgaccgact 2340 tggggacacc aagtcgaaga atctgttatt tgtgcacacg aacttcccct cgaactggat 2400 aagaacgtgg agatgagggc tcccatcttc gtgaagctct ctgcagattt tgataaattt 2460 cttcgaagtc ggagtttcta gggtttgtaa ttgggaaagt gcctcttctt tggtaagaga 2520 gcacttggga taagtgacga agtaattctt cgcagaaatt ctaaaacgac gtggttgagg 2580 cattataatt gtcgtttcgg tttggtgaca accaaacttg cgaaatgaag tggtgacagg 2640 tgcacaatat atagggtgtc tctaaatggc agaatggtaa ttattccaat aattacttta 2700 attcaaaatt caaattggaa ttggtaaagc ggccatccgt ataatatt 2748 //