ID EU487032; SV 2; circular; genomic DNA; STD; VRL; 2754 BP. XX AC EU487032; XX DT 11-MAR-2008 (Rel. 95, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Tomato leaf curl Philippines virus isolate P77, complete genome. XX KW . XX OS Tomato leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M.U., Green S.K., Kenyon L., RA Jan F.J.; RT "Distribution and genetic diversity of begomoviruses infecting tomato and RT pepper plants in the Philippines"; RL Ann. Appl. Biol. 158(3):275-287(2011). XX RN [2] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT "Molecular identification of Solanaceae- and Cucurbitaceae-infecting RT Begomoviruses in the Philippines"; RL Unpublished. XX RN [3] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (13-FEB-2008) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX RN [4] RC Sequence update by submitter RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (16-AUG-2010) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX DR MD5; 5cd90e3c919a173d9e0f03873ac7dd5e. XX CC On Aug 16, 2010 this sequence version replaced gi:169639971. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato leaf curl Philippines virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="P77" FT /mol_type="genomic DNA" FT /country="Philippines:Laguna" FT /isolation_source="plant with yellow leaf curling symptom" FT /db_xref="taxon:96054" FT misc_feature join(2613..2754,1..141) FT /note="intergenic region" FT gene 142..486 FT /gene="V2" FT CDS 142..486 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B0I510" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0I510" FT /protein_id="ACA61028.1" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNV" FT gene 302..1078 FT /gene="V1" FT CDS 302..1078 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B0I511" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0I511" FT /protein_id="ACA61029.1" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1075..1476) FT /gene="C3" FT CDS complement(1075..1476) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B1PR98" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PR98" FT /protein_id="ACA61032.2" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFFKNHDI FT ITVQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWRFLRVFKYQCMKYLYSLGVISINN FT VIRAIKHVLYAVIQTIDVQISHIIKFNIY" FT gene complement(1217..1624) FT /gene="C2" FT CDS complement(1217..1624) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B1PR99" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PR99" FT /protein_id="ACA61031.2" FT /translation="MQNSSPSHNHCTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGL FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLQKPRHHNSADTVQPQ FT PEESVGNSSMFSDLQNLDSFTSSDLAFLKSI" FT gene complement(1530..2612) FT /gene="C1" FT CDS complement(1530..2612) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PRA0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PRA0" FT /protein_id="ACA61030.2" FT /translation="MAPPRKFQINAKNYFLTYPKCSLTKEETLAQIKTLDTVTNKRFIK FT ICRELHEDGSPHLHVLIQFEGKYRCTNKRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQVDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLSANLDRIFAPPLEVFVSPFPSSSFNQVPKELEEWVSENVRDAAARPWRPKSIVIEGY FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDSWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSSLKDWALKNAEFITIAQPL FT YSSTHQSPTQNSQAATNTQA" FT gene complement(2165..2455) FT /gene="C4" FT CDS complement(2165..2455) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PRA1" FT /protein_id="ACA61033.2" FT /translation="MGALISMCSSSSKGNTDARIRDSSTWYPQQDQHITIQTYRELNQA FT PTSNLILIRTETPSNGVSFRSMEDLLEGVNNRPMTLTPKQLTQEVSRRLLM" XX SQ Sequence 2754 BP; 726 A; 539 C; 597 G; 892 T; 0 other; accgtgggcc gcgcaaattt ttttatatat gggcctaatg ggccttttgg atgtcggtct 60 cgaccaatgg aaacgttccc tcatcgctta ataattatgt tgtcctctat ttatttctgc 120 tgcatcagtt ttgtactaaa aatgtgggat cctctggtac atccctttcc tgagagctta 180 cacggcttca gatgtatgct tgccatcaaa tatcttcaga gcttacagaa taaatattct 240 cctgatactg ttgggcatga gtttttgaaa gattttatat gcatattgcg aagtaagaat 300 tatgccgaag cgttcaatag atacagtaac gtcgttgcca atgtctataa cacgtcggag 360 gctcaattac gggagtcagt acagtctccc tgcctctgtc cccactgtcc cagacatgtc 420 ttacaagcga aggtcatgga cttacaggcc catgtttcgc aagcccaaga tgtacagaat 480 gtatagaagc cgtgacgttc ctcgcgggtg tgaaggccca tgtaaggttc agtcttatga 540 acagcgtcat gatatagccc atgtgggtaa ggtcatatgt gtgtctgatg ttactcgtgg 600 taatgggctc acacatcgtg ttggaaagag gttttgtgta aagtctgtgt atgtgttggg 660 gaaggtttgg atggatgaga acatcaagac taagaatcac actaacactg tcatgttttt 720 tttagttcgt gataggagac cctatgggac tccccaggat tttggtcagg tttttaacat 780 gtatgataat gagcctagta ctgcaactgt taaaaatgat aatagagatc gatatcaagt 840 tcttcgcaaa tttcaagcta ccgtgactgg aggtcagtat gcaagcaagg agcaagcaat 900 agtcaagagg ttcatgaaga ttaacaacca tgttacttac aatcatcaag aggctgcgaa 960 gtatgataac catacagaga acgctttact gttgtatatg gcttgtactc atgctagtaa 1020 tccagtgtat gctacgttga aaatcagaat ctatttttat gattctgttc agaattaata 1080 aatattgaat tttattatat gcgaaatttg tacatctatt gtttgaatta cagcgtacag 1140 tacatgcttg atagccctaa ttacattgtt tatgctaata actcctaaac tatacaaata 1200 cttcatacac tgatatttaa atactcttaa gaaacgccaa gtctgaggat gtaaatgagt 1260 ccagattttg cagatcagaa aacattgatg aattcccaac gctttcctca ggttgtggtt 1320 gaactgtatc tgcactgtta tgatgtcgtg gtttttgaag aacggcatct tgtcgtgttg 1380 ggatatcttg aaataaaggg gatttgttat cgtccaggta tatacgccat tctctgcctg 1440 agctgcagtg atgggttccc ctgtgcgaga atccatacga agcacaatta agtcctaaat 1500 agtaagagca gccgcaagga agatcaattc tacgcctgcg tattggtcgc cgcttggcta 1560 ttttgtgttg gactttgatg ggtacttgag tacaatggtt gtgcgatggt gatgaattct 1620 gcattcttta gcgcccagtc tttgagtgaa gaatttttat cctcatccaa gtactcttta 1680 tacgacgacg taggtcctgg attgcagagg aagattgttg ggattccacc tttaatttga 1740 attggtttcc cgtacttcgt gttgctttgc cagtctcttt gggcccccat aaactcttta 1800 aaatgcttta ggtagtgggg gtctacgtca tcaatgacgt tgtaccacga atcattactg 1860 tagacctttg gactcaggtc cagatgtcca cataaataat tatgtggtcc cagtgatcta 1920 gcccacatcg tcttccccgt tcgactatag ccctctatta caatactttt aggtctccac 1980 ggccgcgcag cggcatccct tacattctcg gacacccatt cttcaagttc ttttggaact 2040 tgattgaaag atgaagaagg aaaaggacta acaaaaacct ctaaaggagg tgcaaagatc 2100 ctatctaaat ttgcacttaa attatgaaac tgtaaaacaa aatcttttgg tgctaattcc 2160 ctaattacat taagagcctc cgacttactt cctgtgttaa ttgctttggc gtaagcgtca 2220 ttggccgatt gttgaccccc tctagcagat cttccatcga cctgaaactc accccattcg 2280 atggtgtctc cgtccttatc aatataagat ttgacgtcgg agcttgattt agctccctgt 2340 atgtttggat ggtaatgtgc tgatcttgtt ggggatacca ggtcgaagaa tctcttattc 2400 gtgcatctgt atttcccttc gaactggatg agcacatgga gatgagggct cccatcttcg 2460 tgcagttctc tgcagatttt gatgaatctt ttgtttgtta cagtatctag tgtttttatc 2520 tgggcaaggg tttcctcttt tgtaagagag catttgggat atgtaagaaa ataatttttg 2580 gcatttattt ggaattttct gggtggtgcc atttgactta gtcaatgggt acctattgag 2640 aggatttcat tctactcagg gtatcggtac attggtaccc atatatactt ggttacctaa 2700 tggcataatt gtaatttttt tatgggcttc caagcggccc acgactataa tatt 2754 //