ID EU487029; SV 2; circular; genomic DNA; STD; VRL; 2754 BP. XX AC EU487029; XX DT 11-MAR-2008 (Rel. 95, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Tomato leaf curl Philippines virus isolate P36, complete genome. XX KW . XX OS Tomato leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M.U., Green S.K., Kenyon L., RA Jan F.J.; RT "Distribution and genetic diversity of begomoviruses infecting tomato and RT pepper plants in the Philippines"; RL Ann. Appl. Biol. 158(3):275-287(2011). XX RN [2] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT "Molecular identification of Solanaceae- and Cucurbitaceae-infecting RT Begomoviruses in the Philippines"; RL Unpublished. XX RN [3] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (13-FEB-2008) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX RN [4] RC Sequence update by submitter RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (16-AUG-2010) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX DR MD5; 5207f60d9884be281aef4c263f5245ba. XX CC On Aug 16, 2010 this sequence version replaced gi:169639950. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato leaf curl Philippines virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="P36" FT /mol_type="genomic DNA" FT /country="Philippines:Benguet" FT /isolation_source="plant with leaf curling symptom" FT /db_xref="taxon:96054" FT misc_feature join(2614..2754,1..142) FT /note="intergenic region" FT gene 143..487 FT /gene="V2" FT CDS 143..487 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B1PR78" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B1PR78" FT /protein_id="ACA61010.1" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVVQAKVMDLQAH FT VSQAQDVQNV" FT gene 303..1079 FT /gene="V1" FT CDS 303..1079 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B0I511" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0I511" FT /protein_id="ACA61011.1" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1076..1477) FT /gene="C3" FT CDS complement(1076..1477) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B1PR80" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PR80" FT /protein_id="ACA61014.1" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFLKNHDI FT ITVQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWHFLRVFKYQCMKYLYNLGVISINN FT VIRAIRHVLYDVIQIIDVQISHIIKFNIY" FT gene complement(1218..1625) FT /gene="C2" FT CDS complement(1218..1625) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B1PR81" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PR81" FT /protein_id="ACA61013.1" FT /translation="MQNSSPSRGHSTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGI FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRYHNSTDTVQPQ FT PEESVGNTSMFSDLQNLDSFTSSDLAFLKSI" FT gene complement(1525..2613) FT /gene="C1" FT CDS complement(1525..2613) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PR82" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PR82" FT /protein_id="ACA61012.2" FT /translation="MAPPRKFQINAKNYFLTYPKCSLTKEETLAQIKRLDTVTNKKFIK FT ICRELHEDGSPHLHVHIQFEGKYRCTNKRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLNANLDRIFAPPLEIFRCPFLSSSFDQVPKELEDWVSENVRDAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFICNPGPTSSYKEYLDEDKNSPLKDWALKNAEFITLTRPL FT YSGTHQSPAQNSQEETNTQAEN" FT gene complement(2166..2456) FT /gene="C4" FT CDS complement(2166..2456) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PR83" FT /protein_id="ACA61015.2" FT /translation="MGALISMCTSSSKGNTDARIRDSSIWYPQPGQHITIQTYRELNQA FT PTSNHILIRMETPSNGVSFRSMEDLLEGVNNQPMMLTPKQLTQEVSRRLLM" XX SQ Sequence 2754 BP; 736 A; 541 C; 595 G; 882 T; 0 other; accgtgggcc gcgcaaattt ttttttatat tgggcctaat gggcctattg gatgtcggtc 60 tcgaccaatg gaaaccctcc ctcatcgctt aacaatcatg ttgtcctcta tttatttctg 120 ctgcatcagt tttgaactaa gaatgtggga tcctctggta catccatttc ctgaaagctt 180 acacggcttc agatgtatgc ttgccatcaa atatcttcag agcttacaga ataaatattc 240 tccggacact gttgggcatg agtttttgaa agattttata tgcatattgc gaagtaagaa 300 ttatgccgaa gcgttcaata gatacagtaa cgtcgttgcc aatgtctata acacgtcgga 360 ggctcaatta cgggagtcag tacagtctcc ctgcctctgt ccccactgtc ccagacatgt 420 cgtacaagcg aaggtcatgg acttacaggc ccatgtttcg caagcccaag atgtacagaa 480 tgtatagaag ccgtgatgtt cctcgtgggt gtgaaggccc atgtaaggtt cagtcttatg 540 aacagcgtca tgatatagcc catgtgggta aggtcatatg tgtgtctgat gtcactcgtg 600 gtaatggtct cacacaccgt gtgggaaaga ggttttgtgt aaagtctgtg tatgtgttgg 660 gtaaggtctg gatggatgag aacatcaaga ctaagaatca cactaacact gtcatgtttt 720 ttttagttcg tgataggaga ccctatggga ctccccagga ttttggtcag gtttttaaca 780 tgtatgataa tgagcctagt actgcaactg ttaaaaatga taatagagat cgatatcaag 840 ttcttcgtaa atttcaagct accgtgactg gaggtcagta tgcaagcaag gagcaagcaa 900 tagtcaagag gttcatgaag attaacaacc atgtcactta caatcatcaa gaggctgcga 960 agtatgataa ccatacagag aacgctttac tgttgtatat ggcatgtacc catgctagta 1020 atccagtgta tgctactttg aaaatcagaa tctattttta tgattctgtt cagaattaat 1080 aaatattaaa ttttattata tgagaaattt gtacatcgat aatttgaatt acatcgtata 1140 gtacatgcct tatagcccta attacattgt ttatgctaat aactcctaaa ttatacaaat 1200 atttcataca ctgatattta aatactctta agaaatgcca agtctgagga tgtaaatgag 1260 tccagatttt gcagatcaga aaacattgat gtattcccaa cgctttcctc aggttgtggt 1320 tgaactgtat ctgtactgtt atgatatcgt ggtttttcaa gaacggcatc ttgtcgtgtt 1380 gggatatctt gaaataaagg ggatttgtta tcgtccaggt atatacgcca ttctctgcct 1440 gagctgcagt gatgggttcc cctgtgcgag aatccatacg aagcgcaatt aattcccaga 1500 tagtaagagc agccgcaagg aagatcaatt ctccgcctgc gtattggtct cctcttggct 1560 attttgtgct ggactttgat gggtacctga gtagagtggc ctcgtgaggg tgatgaattc 1620 tgcatttttt agtgcccagt ctttgagtgg agaattttta tcctcatcca agtactcttt 1680 atacgacgac gtaggtcctg gattgcagat gaagattgtt ggaattccac ctttaatttg 1740 aattggtttc ccgtacttcg tgttgctttg ccagtctctt tgggccccca taaactcttt 1800 aaaatgcttt aggtagtggg ggtctacgtc atcaatgacg ttataccaag catcattact 1860 gtagaccttt ggactcaggt ccagatgtcc acataaatag ttatgtggtc ccagagatct 1920 agcccacatc gtcttccccg ttcgactatc gccctctatg acaatactta tgggtctcca 1980 tggccgcgca gcggcatccc gaacattctc ggaaacccag tcttcaagtt cttttggaac 2040 ttggtcgaaa gaagaagaaa gaaaaggaca acgaaaaatc tctaaaggag gtgcaaagat 2100 cctatctaaa ttggcattta aattatgaaa ttgtaaaaca aaatcttttg gagctaactc 2160 cctaattaca ttaagagcct ccgacttact tcctgtgtta attgctttgg cgtaagcatc 2220 attggctgat tgttgacccc ctctagcaga tcttccatcg atctgaaact caccccattc 2280 gagggtgtct ccatccttat caatatatga tttgacgtcg gagcttgatt tagctccctg 2340 tatgtttgga tggtaatgtg ctgacctggt tggggatacc agatcgaaga atctcttatt 2400 cgtgcatctg tatttccctt cgaactggat gtgcacatgg agatgagggc tcccatcttc 2460 gtgcagttct ctgcagattt tgatgaattt cttgtttgtt acagtatcta gtctttttat 2520 ttgggcaagg gtttcctctt tagtaagaga gcatttggga tatgtaagaa aataattttt 2580 ggcatttatt tggaattttc tgggtggtgc catttgactc agtcaatggg taccaattga 2640 gaggatttca ttctactcag ggtatcggta cattggtacc catatatact tggttaccta 2700 atggcataat tgtaattttt tatgggcttc taagcggccc acgactataa tatt 2754 //