ID EU445692; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC EU445692; XX DT 01-JUN-2008 (Rel. 96, Created) DT 01-JUN-2008 (Rel. 96, Last updated, Version 1) XX DE Urochloa streak virus isolate USV-NLag1, complete genome. XX KW . XX OS Urochloa streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2736 RX DOI; 10.1007/s00705-008-0123-9. RX PUBMED; 18521534. RA Oluwafemi S., Varsani A., Monjane A.L., Shepherd D.N., Owor B.E., RA Rybicki E.P., Martin D.P.; RT "A new African streak virus species from Nigeria"; RL Arch. Virol. 153(7):1407-1410(2008). XX RN [2] RP 1-2736 RA Varsani A., Monjane A.L., Oluwafemi S., Shepherd D.N., Owor B.E., RA Rybicki E.P., Martin D.P.; RT ; RL Submitted (06-FEB-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Rondebosch, Cape Town, RL WP 7701, South Africa XX DR MD5; ad3724ced1fbc43ee71479966ac4d426. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Urochloa streak virus" FT /isolate="USV-NLag1" FT /mol_type="genomic DNA" FT /country="Nigeria:Lagbaja" FT /lat_lon="8.92 N 4.67 E" FT /collection_date="2007" FT /db_xref="taxon:520848" FT CDS 157..483 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B3FVY4" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B3FVY4" FT /protein_id="ACC68172.1" FT /translation="MESQGAIYPLPQSALPRVPSAAPSSSGLPWSRVGEIVIFTFVAVL FT ALYLLWLWVLRDLIFIVKARRGRSTEELQFGDLERAPPVPSADGPPSVPAPSCPAQPRS FT PFLG" FT CDS 494..1240 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B3FVY5" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B3FVY5" FT /protein_id="ACC68173.1" FT /translation="MSSSLGKRKRSDEGAWSKGKSKKKAMRGSSSRRPGPVRGPRPALQ FT IAQYIAAGTSMVTVPSGGVCELLATYARGSDEGNRHTNETVTYKVALDYHFVLTAEACR FT YSSIGVGVAWLVYDAQPTGNAPQVSDIFPHGDTLAAFPYTWKVGREVCHRFVVKRRWTF FT TMESDGRIGSDIPRTTDAWPPCKRSIYFHKFVTGLGVKTEWKNVADGGVGAIKKGALYL FT VIAPGNGLTFTAHGIARLYFKSVGNQ" FT CDS complement(1752..2657) FT /codon_start=1 FT /product="replication associated protein" FT /db_xref="GOA:B3FVY6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B3FVY6" FT /protein_id="ACC68174.1" FT /translation="MGWVGFRRELSRHRVWGEQIAPRLELMATVGSSSNSVASRSFKHR FT NANTYLTYPKCPLEPEAIGLTLWSLIAPWEPAYIIVCREAHQDGTWHCHGLAQSVKPVT FT TRNSRFFDIEDHYPNIQSAKFVDKVKTYILKDPIALWERGTFIPRKKSFVPNQGDEPPT FT KPTKDDIVRDIIEHFTSKQEYLFRLQKELPYEWATKLQYFEYSANKLFPDIPEPYIHPH FT PQTEPELHCKETIDDWLKPNIFQVHPDAYMLINNCTREQAESDLVWLDDVTHSNYLQTE FT SRASTSSGLQGQGNQPGLEA" XX SQ Sequence 2736 BP; 574 A; 682 C; 755 G; 725 T; 0 other; taatattaca gcgtcccctt tggcgagggg cccatgctaa accgggcccc gagcggtcct 60 ttgctgcttt gtgtggggcg tgatttaaat ccagcccttg ctttcgaccg ccgacaggct 120 ttggtgctat aaatcggtcc tctgctctcc ctttgtatgg agagccaagg tgcgatctat 180 cctttgcctc aaagtgcttt gccgcgggta ccctctgcag ctccgtcatc ctcaggactg 240 ccgtggagtc gcgtcggtga gatagttata ttcacttttg ttgcagtgct agcgttgtat 300 ttgctgtggt tgtgggtgct gagagatctt atcttcattg ttaaggctcg gcgaggtaga 360 tctacggagg agctgcaatt cggggacctt gagcgtgccc cgcctgtccc ttctgccgac 420 ggtcctccgt ccgttccagc gccttcttgt cctgcccagc ctaggtctcc ctttctaggc 480 tgagctggta ggcatgtcgt cttcccttgg caagaggaag aggtccgatg agggcgcttg 540 gtctaagggg aagtctaaga agaaggcaat gagaggctcg tcctctcgca ggcctggccc 600 tgtcaggggg cctcgtcctg ctctccaaat tgcgcagtac atagctgcgg gcacctctat 660 ggtcactgtc ccgtccggtg gcgtttgtga gctccttgcg acctacgcaa gaggatccga 720 tgagggtaac aggcacacca acgagactgt tacgtacaag gtcgccctgg attaccactt 780 cgtgctcaca gcagaggcct gccgctactc gtccatcggt gtaggggtgg cttggttggt 840 gtatgacgca cagcccaccg gcaacgcccc tcaggtctct gacatattcc cacacggcga 900 caccctcgct gcattcccgt atacttggaa ggtcggtagg gaagtgtgtc atcgcttcgt 960 ggtgaaacgg cggtggactt tcacgatgga gtctgacggg aggatcggct ccgatattcc 1020 tagaacgacg gatgcttggc cgccctgcaa gcggagtatc tacttccaca agtttgtcac 1080 cggactcggt gtaaaaaccg agtggaagaa cgtagctgac ggaggcgtag gggccattaa 1140 gaagggtgct ctgtacctgg tcattgcccc cggcaatggt ctcactttca ccgcgcatgg 1200 aattgcgcgg ttgtacttca agagtgttgg gaatcagtga ttccctcgaa taataaaata 1260 atttttataa tttcattgat gagcatgcaa tgcatacatt acatagtcag ccgatgggct 1320 gacggaaaac acacataaac aaggcggaca ggataaaggc gggcggctaa gggaagccgc 1380 atggggcaac acaacacacc caacagatca ttattgaaca tgcagccgcc ggcttcaaac 1440 aggggagaac cacttctccc ctggcgtcat aatgtatatg acgcagtttg cctcgaagta 1500 ctcccgctgt gcgggagtca tatccttcag ccagtcctca tcttcattgg cgaggacgat 1560 ggtcgggatg cttcttgatg cgaccttctt gcgtttgcca tacttggggt tgacgatgta 1620 ctccttctga cagccaatta actgcttcca acaaggacag tacttgaaag gaatatcgtc 1680 tacgatatta tacatagcct cttcgtcata agaggtccag tctacgttat tctgccagta 1740 attgtggcga cctaggcttc tagcccaggt tgatttccct gtccttgtag gcccgacgat 1800 gtagaggctc tgctttctgt ctgaaggtag ttgctgtgtg taacgtcatc gagccagaca 1860 aggtcagact ctgcctgttc tcgggtgcag ttgttaatta gcatgtatgc atcagggtgt 1920 acctggaaga tgttgggttt gagccaatca tctattgtct ctttgcagtg cagctcaggc 1980 tctgtctgag gatgaggatg gatgtaaggc tcaggaatgt cagggaagag tttattggcc 2040 gagtactcaa agtactgcag cttagtggcc cactcgtaag ggagttcttt ctgaagccta 2100 aagaggtact cctgcttgct agtaaagtgc tcgatgatat ctctaacgat atcatccttt 2160 gttggtttag tggggggctc atccccttgg ttaggaacga aagatttctt tcgtggaatg 2220 aaggtacctc tctcccatag tgcgatggga tctttcagta tgtaggtttt taccttgtca 2280 acaaacttag ctgattggat gttcggataa tgatcttcaa tgtcgaagaa tcttgaattt 2340 ctggtcgtga caggcttgac gctctgtgca agaccatggc agtgccatgt cccgtcttgg 2400 tgtgcctctc gacacactat gatgtatgcc ggttcccatg gagctatcaa gctccatagg 2460 gtgagaccaa tggcttcagg ctctagaggg cacttgggat aggtgaggta ggtgtttgcg 2520 ttccggtgct tgaagctccg tgacgccacg ctgttggatg aagatcctac ggtagccatg 2580 agctctagcc tgggtgcgat ttgctctccc caaactctat gcctagacag ttcgcgtcga 2640 aatcccaccc accccatccc cttcttatag tagggattgt tgggctgggc cggctttcaa 2700 attttttggg ccggccgaca aaggggacgc gaacaa 2736 //