ID   EU433399; SV 1; linear; genomic RNA; STD; VRL; 966 BP.
XX
AC   EU433399;
XX
DT   21-FEB-2008 (Rel. 94, Created)
DT   03-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Potato virus S coat protein gene, partial cds; and 11 kDa protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-966
RX   DOI; 10.1016/j.jviromet.2008.02.004.
RX   PUBMED; 18353450.
RA   Nie X., Bai Y., Molen T.A., Desjardins D.C.;
RT   "Development of universal primers for detection of potato carlaviruses by
RT   RT-PCR";
RL   J. Virol. Methods 149(2):209-216(2008).
XX
RN   [2]
RP   1-966
RA   Nie X., Bai Y., Molen T.A., Desjardins D.C.;
RT   ;
RL   Submitted (28-JAN-2008) to the INSDC.
RL   Agriculture and Agri-Food Canada, Potato Research Centre, 850 Lincoln Road,
RL   Fredericton, NB E3B4Z7, Canada
XX
DR   MD5; a67c5bb34e9d527a5efb0ecc45e75b22.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..966
FT                   /organism="Potato virus S"
FT                   /host="potato"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /PCR_primers="fwd_name: Car-F1, fwd_seq:
FT                   cnrtbtcnaayaayatggc, rev_name: dT-B, rev_seq:
FT                   acgcttttttttttttttttb"
FT                   /db_xref="taxon:12169"
FT   CDS             <1..569
FT                   /codon_start=3
FT                   /product="coat protein"
FT                   /db_xref="GOA:B1A9T2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B1A9T2"
FT                   /protein_id="ACA05834.1"
FT                   /translation="VSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSS
FT                   VYLDPAGTVEFPIGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAM
FT                   GFQWNARFAAFDTFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLA
FT                   NTNVEYTGGMLGAEIVRNHRNAINQ"
FT   CDS             566..850
FT                   /codon_start=1
FT                   /product="11 kDa protein"
FT                   /note="nucleic acid-binding protein"
FT                   /db_xref="GOA:B1A9T3"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:B1A9T3"
FT                   /protein_id="ACA05835.1"
FT                   /translation="MKADRLATLLLCVHRLGCVLPVEVCVNIISLSAGPISRGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 966 BP; 281 A; 195 C; 249 G; 241 T; 0 other;
     cagtgtcgaa taacatggcg aacaccgagc aaatggcaca aatcactgca gacatcgctg        60
     gacttggggt ccccactgaa catgttgcag gggtcatact gaaggtggtg atcatgtgtg       120
     caagcgtgag tagctctgtt tatctagatc cagcagggac tgtggagttc ccaataggcg       180
     cagtgccctt ggactcgatc atagcaatta tgaagaatcg cgcgggattg aggaaagtgt       240
     gcaggctgta tgctccagtc gtgtggaatt acatgctagt ccagaatagg ccgccctcgg       300
     attggcaggc tatgggattc caatggaatg cacgcttcgc cgcatttgac acattcgatt       360
     atgtgactaa tggggctgca atccagcccg tagaggggct catacgtagg cccacgcctg       420
     aggaaacaat agctcacaat gcccacaaga gtatggcaat tgacaagtcg aacagaaatg       480
     agcgattggc caacactaat gttgagtaca ctggagggat gcttggcgct gagattgtgc       540
     gcaatcaccg taatgcgatc aaccaatgaa ggcagaccgt ttagccacgt tattattgtg       600
     tgtccatcga ctaggatgtg tgttgccagt tgaagtttgt gtaaatataa taagcctaag       660
     cgcaggtcca atttctaggg gtcgttccac ttacgctcgt aagcggaggg cccgcagcat       720
     tgggcgatgc tggcgatgtt atcgtgtcta tccacctatt tgtaattcta agtgtgataa       780
     tagaacatgc cgtccaggca ttagtcaaaa ttataaagta gtgactttca ttcggggttg       840
     gagtaactga ggtgatacca cccatgatgc aaagtcagag tttcgcataa aacttaaata       900
     atatataagt gtgcaactat aaagaaaata tgtttttaaa atattttagc aaaaaaaaaa       960
     aaaaaa                                                                  966
//