ID   EU433398; SV 1; linear; genomic RNA; STD; VRL; 982 BP.
XX
AC   EU433398;
XX
DT   21-FEB-2008 (Rel. 94, Created)
DT   03-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Potato virus M coat protein gene, partial cds; and 11 kDa protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Potato virus M
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-982
RX   DOI; 10.1016/j.jviromet.2008.02.004.
RX   PUBMED; 18353450.
RA   Nie X., Bai Y., Molen T.A., Desjardins D.C.;
RT   "Development of universal primers for detection of potato carlaviruses by
RT   RT-PCR";
RL   J. Virol. Methods 149(2):209-216(2008).
XX
RN   [2]
RP   1-982
RA   Nie X., Bai Y., Molen T.A., Desjardins D.C.;
RT   ;
RL   Submitted (28-JAN-2008) to the INSDC.
RL   Agriculture and Agri-Food Canada, Potato Research Centre, 850 Lincoln Road,
RL   Fredericton, NB E3B4Z7, Canada
XX
DR   MD5; 4fac141d03e8af875c592a87fb4da3bb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..982
FT                   /organism="Potato virus M"
FT                   /host="potato"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /PCR_primers="fwd_name: Car-F1, fwd_seq:
FT                   cnrtbtcnaayaayatggc, rev_name: dT-B, rev_seq:
FT                   acgcttttttttttttttttb"
FT                   /db_xref="taxon:12167"
FT   CDS             <1..572
FT                   /codon_start=3
FT                   /product="coat protein"
FT                   /db_xref="GOA:B1A9T0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B1A9T0"
FT                   /protein_id="ACA05832.1"
FT                   /translation="VSNNMATSEDMMRIYVNLEGLGVPTEYVQQVVIQAVLFCKDASSS
FT                   VYLDPRGSFEWPRGAIIADAVLAVMKKDAETLRRVCRLYAPVTWNHMLAHNSPPADWAA
FT                   MGFQYEDRFAAFDCFDYVENTAAVQPLEGLIRRPTPREKVAHNTHKDIALRGANRNQVF
FT                   SSLNAEVTGGMNGPELTRDFSKSNNK"
FT   CDS             569..895
FT                   /codon_start=1
FT                   /product="11 kDa protein"
FT                   /note="nucleic acid-binding protein"
FT                   /db_xref="GOA:B1A9T1"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:B1A9T1"
FT                   /protein_id="ACA05833.1"
FT                   /translation="MKCVTQTALLVARALFLHSGVFVFELVYLISTRAGRPLGGGQSKY
FT                   ARRRRAIAAGRCHRCYRLWPPTVSTVKCDNRSCVPGISYNVRVAQQIDEGVTEVIPSVI
FT                   QREE"
XX
SQ   Sequence 982 BP; 253 A; 207 C; 275 G; 247 T; 0 other;
     cggtgtcgaa caacatggcc acatctgagg acatgatgcg catctacgtc aatcttgaag        60
     gcttgggcgt gccgactgag tacgtgcagc aagtggtgat ccaagcggtg cttttctgca       120
     aagatgcaag tagctcggtg tatctcgatc cacgcggctc cttcgaatgg ccaaggggtg       180
     cgatcatagc agatgcggtg ttggcggtga tgaagaaaga cgcagagacc ctgcgcagag       240
     tctgtaggct gtacgcgccc gtcacgtgga atcatatgct ggcgcacaat tctccaccag       300
     cagactgggc ggctatgggt ttccagtatg aggatagatt tgcggccttt gattgctttg       360
     actacgtgga gaatacagct gcagttcaac cgctggaagg gctaatacgc cgtcccactc       420
     caagagagaa ggttgcgcac aatacccata aggatatagc tctgagaggg gctaatcgca       480
     accaggtgtt tagttcgctc aacgctgagg taactggagg tatgaatggt cccgagctca       540
     ctagggattt cagcaaatcg aataataaat gaagtgtgtg acccaaactg cgttgctcgt       600
     agctagggct ttgtttttgc attctggtgt gtttgtgttt gagttagtgt atttaatttc       660
     tacacgtgct ggccgaccgc ttgggggcgg gcagtctaag tatgcacgtc gcagacgtgc       720
     gatagctgca gggaggtgtc acaggtgtta ccgcctgtgg ccgcccactg tatctactgt       780
     taagtgtgac aataggagtt gtgtaccagg catttcttac aatgtgcgcg tggcgcagca       840
     gatagatgaa ggagtaaccg aggtgatacc ttcagtcatc caaagggagg agtagccatc       900
     aaatcctatt taatatataa agtgtgctac tataaataaa actaggtttt taactatttt       960
     tagcctaaaa aaaaaaaaaa aa                                                982
//