ID EU432373; SV 1; circular; genomic DNA; STD; VRL; 2771 BP. XX AC EU432373; XX DT 01-MAR-2008 (Rel. 95, Created) DT 27-FEB-2009 (Rel. 100, Last updated, Version 2) XX DE Cotton leaf curl Gezira virus-[okra:Niger] isolate AFNG1 segment A, DE complete sequence. XX KW . XX OS Cotton leaf curl Gezira virus-[okra:Niger] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2771 RA Shih S.L., Kumar S., Tsai W.S., Lee L.M., Green S.K.; RT "First report of a begomovirus associated with okra yellow leaf curl RT disease in Niger"; RL Unpublished. XX RN [2] RP 1-2771 RA Shih S.L., Kumar S., Lee L.M., Green S.K.; RT ; RL Submitted (28-JAN-2008) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, P.O.Box 42, Shanhua, Republic RL of China XX DR MD5; c64239bac32b9528c4321912702ced0a. DR EuropePMC; PMC2839976; 20178575. XX FH Key Location/Qualifiers FH FT source 1..2771 FT /organism="Cotton leaf curl Gezira virus-[okra:Niger]" FT /segment="A" FT /host="okra" FT /isolate="AFNG1" FT /mol_type="genomic DNA" FT /country="Niger:Sadore" FT /collection_date="2007" FT /db_xref="taxon:502871" FT gene 161..529 FT /gene="V2" FT CDS 161..529 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B1PIX3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B1PIX3" FT /protein_id="ACA30271.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRESYDPSTLGYDLLSDL FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQPRVVLCTCPHCPRHKQASGLDQQAHV FT QKTEDVQNVSQPRCPKGM" FT gene complement(294..851) FT /gene="C5" FT CDS complement(294..851) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B1PIX4" FT /protein_id="ACA30273.1" FT /translation="MITEIVLHSSSARFVVKHVENLTKIQRGIPIRSSITDKEKHNIVG FT VILLLNVVIHPYLTKDINGFDSETLSSTMGKTNPLSNIGHTSDNTHMLDIITLFIRLDL FT TGTFTSLWDIWAAIHSVHPRFSVRGPVGPGPTLVCDEDSGGTCRGQPWAVEVQTATHFR FT GGSGNDDICWSLRHSWYDEQLR" FT gene 321..1097 FT /gene="V1" FT CDS 321..1097 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B1PIX5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B1PIX5" FT /protein_id="ACA30268.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW FT TNRPTYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHMGIVRCVSDVTKGVGLTH FT RTGKRFTIKSIYILGKVWMDDNIKKQNHTNNVMFFLVRDRRPYGNSPLDFGQVFNMFDN FT EPSTATVKNDLRDHFQVLRKFTATVIGGPSGMKEQALVRRFFRINSQIVYNHQEAGKFE FT NHTENAILLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1094..1495) FT /gene="C3" FT CDS complement(1094..1495) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:B1PIX6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PIX6" FT /protein_id="ACA30269.1" FT /translation="MDSRTGELITAHQSENGVLIWTINNPLYFKTIKEFRLTHGNQTMI FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRLGVISINNV FT IRAVNHVLYDVLQTTVESEFTHNIQIKLY" FT gene complement(1239..1643) FT /gene="C2" FT CDS complement(1239..1643) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:B1PIX7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PIX7" FT /protein_id="ACA30270.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASEREWRTYLDNQQSPVFQNHQGVSSNARESNNDRDADKIQLQP FT QEGVGDSQMFHELPGLDDLTPSDWSFLKRI" FT gene complement(1543..2631) FT /gene="C1" FT CDS complement(1543..2631) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PIX8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PIX8" FT /protein_id="ACA30267.1" FT /translation="MAPTKKFRINSKNYFLTFPKCSLSKEEALEQLLNLNTPTNKKYIK FT ICRELHEDGQPHLHVLLQFQGKYNCQNKRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNSNLERIFEEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPDRPISIVIEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWALKNATFITLSNPL FT YSGTNQSPASGGQEESNQETQD" FT gene complement(2181..2474) FT /gene="C4" FT CDS complement(2181..2474) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PIX9" FT /protein_id="ACA30272.1" FT /translation="MASLICMCFSSSKGNTTAKIRDSSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHSNGENSRSTEDLPEEANRQPMTLTPQRLTQEVRQRLLGL" XX SQ Sequence 2771 BP; 696 A; 620 C; 615 G; 840 T; 0 other; accggtgggc gcgaaaaaaa aagtggaccc cgccccacgt gaacatgtcg cgcgagtggt 60 gaacatgtcg cgcgatgctg tccaatcaga acgcgcgctc tacgcattat aatttgaaat 120 ttgaaatata tacttgctcc ccaagttgtc cgccataact atgtgggatc cgttattgaa 180 cgacttccct gaatccgttc acggtttccg ttgtatgctc gccgtgaaat atttgcaggc 240 tgttcgtgag tcgtacgatc cttccaccct tggttacgat cttctaagcg atctcatcgg 300 agttgttcgt cgtaccaact atgtcgaagc gaccagcaga tatcatcatt tccactcccg 360 cctcgaaagt gcgtcgccgt ctgaacttcg acagcccagg gttgtcctct gcacgtgccc 420 ccactgtcct cgtcacaaac aagcgtcggg cctggaccaa caggcccacg tacagaaaac 480 cgaggatgta cagaatgtat cgcagcccag atgtcccaaa gggatgtgaa ggtccctgta 540 aggtccagtc ttatgaacag cgtgatgatg tcaagcatat gggtattgtc cgatgtgtgt 600 ccgatgttac taagggggtt ggtcttaccc atcgtactgg aaagcgtttc actatcaaat 660 ccatttatat ccttggtaag gtatggatgg atgacaacat taagaagcag aatcacacca 720 acaatgttat gtttttcctt gtccgtgata gaagaccgta tgggaattcc ccgttggatt 780 ttggtcaagt tttcaacatg tttgacaacg aacctagcac tgctactgtg aagaacgatc 840 tccgtgatca ttttcaggta ttgaggaagt ttactgcaac tgttattggt ggaccttcag 900 gaatgaaaga acaagccctt gttcgtcgtt ttttcaggat taatagtcag attgtttata 960 atcatcaaga ggctggtaaa ttcgagaatc atacggagaa tgctatattg ttgtatatgg 1020 catgtactca tgcctcaaac cctgtgtatg ctacgttaaa gatacggatc tacttctacg 1080 attcggtatc taattaatat aattttattt gaatattgtg cgtgaattca ctttccacag 1140 ttgtttgcaa tacatcgtac aaaacatgat tgactgccct aattacattg ttaattgaaa 1200 ttacacctaa tctatacaaa tatttcataa tctgcttcct aaatacgttt aagaaaagac 1260 cagtcggagg gcgtgagatc gtccagaccc ggaagttcat gaaacatttg tgaatcccca 1320 actccttcct gaggttgtag ttgaatctta tctgcatctc tatcattgtt tgattcccgt 1380 gcgttagacg aaactccttg atggttttga aatacagggg attgttgatt gtccagataa 1440 gtacgccatt ctcgctctga tgcgcagtga tgagttcccc tgtgcgtgaa tccattgtct 1500 ctgcacgtga aggctacgta taccgtgcaa ccacaaggga tgtcaatcct gcgtctcctg 1560 attgctctct tcttggcctc ccgatgctgg actttgattg gtacctgagt acagcggatt 1620 tgagagggtg atgaaggtcg cattctttaa tgcccaggat ttgagatgcg cgtttttctc 1680 ctcgtctaaa tactctttat atgaggaatt gggacctgga ttgcagagga agattgttgg 1740 gatgcctcct ttaatttgaa ctggtttccc gtattttgtg ttgctttgcc agtccttttg 1800 tgcccccatg aattccttaa agtgtttcag ataatgcggg tcaacatcat cgatgacgtt 1860 ataccatgcg tcattactga acacctttgg gcttagatca agatggccgc acagataatt 1920 gtgaggccca agacttctgg cccatacggt cttccctgtt ctgctatccc cttcaatcac 1980 tatactaatc ggtctatctg gccgcgcagc ggcctcaacg acgttctccg ccgcccattc 2040 ttcaagttct tctggaactt ggtcgaaaga agaagacaaa aaaggagaaa cataaggagc 2100 tggaggctcc tcaaaaatcc tctctaaatt actatttaaa ttatgaaatt gtaaaacaaa 2160 atctttggga gctaactccc ttataaccct aagagcctct gccttacttc ctgcgttaag 2220 cgctgcggcg taagcgtcat tggctgtctg ttggcctcct ctggcagatc ttccgtcgat 2280 ctggaattct ccccattcga gtgtgtctcc atccttgtcg atgtaggact tgacgtcgga 2340 gctggattta gctccctgaa tgtttggatg gaaatgtgct gacctatttg gggagaccag 2400 gtcgaagaat ctcttatttt ggcagttgta tttcccttgg aactggagaa gcacatgcag 2460 atgaggctgg ccatcttcgt gaagctctct gcaaatcttg atgtattttt tatttgttgg 2520 ggtgtttagg tttagaagtt gctctagtgc ttcttcttta gaaagagaac attttgggaa 2580 agtgaggaaa tagtttttag aatttattct gaatttcttt gtaggagcca tattgtcaac 2640 tagcaccgat tgaccactcc agatacttct ccctagtgaa ttggggttct atatatagtg 2700 agaccccaaa tggcattatg gtaataatcc caaaaaattt gaacccccat agcgcccacc 2760 gttctaatat t 2771 //