ID EU421060; SV 1; linear; genomic RNA; STD; VRL; 3395 BP. XX AC EU421060; XX DT 16-FEB-2008 (Rel. 94, Created) DT 24-APR-2009 (Rel. 100, Last updated, Version 3) XX DE Squash mosaic virus isolate CH 99/211 segment RNA2, complete sequence. XX KW . XX OS Squash mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-3395 RX DOI; 10.1007/s11262-009-0354-1. RX PUBMED; 19330435. RA Hu J., Zhou T., Liu L., Peng B., Li H., Fan Z., Gu Q.; RT "The genomic sequence of a Chinese isolate of Squash mosaic virus with RT novel 5' conserved ends"; RL Virus Genes 38(3):475-477(2009). XX RN [2] RP 1-3395 RA Hu J.A., Gu Q.S., Zhou T., Fan Z.F., Peng B., Liu L.F., Li H.F.; RT ; RL Submitted (23-JAN-2008) to the INSDC. RL China Agricultural University, Beijing 100094, China XX DR MD5; 732e192ffb8f64f1d3605a16918d834d. XX CC GenBank Accession Numbers EU421059-EU421060 represent the complete CC genome of Squash mosaic virus CH 99/211. XX FH Key Location/Qualifiers FH FT source 1..3395 FT /organism="Squash mosaic virus" FT /segment="RNA2" FT /isolate="CH 99/211" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12263" FT CDS 504..3266 FT /codon_start=1 FT /product="polyprotein 2" FT /note="encodes movement protein, larger coat protein and FT smaller coat protein" FT /db_xref="GOA:B1A4F9" FT /db_xref="InterPro:IPR003181" FT /db_xref="InterPro:IPR003182" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B1A4F9" FT /protein_id="ABZ89552.1" FT /translation="MEVIQKEGLAASALKDKERLAEKAVVNQPLSNLIPHSNKMYERSK FT SLLSGLKRGLIKQKEVAFDKLMGGSTIDFQHIPTGTLTPGENKVLDIPIVPQHLLTSTN FT ITDYHQANNKSANGATALHVGAIEVILDCFTSPDSNICGGMLLVDTAHLNPDNAIRSVF FT VAPFIGGRPIRVLLFPDTLVEIAPNMNSRFKLLCTTSNGDVAPDFNLAMVKVNVAGCAV FT SLTKTYTPTAYLEQELIKEKGAIVQYLNRHTFSMHRNNQMTKEEMQKQCLSFRLESALT FT LQEKHPLHATFCKSTNFVYKIGGDAKEGSNGSLTVNESQLSSHSSSTHVLHKHNNSGDN FT EVEFSEIGVVVPGAGRTKAYGQNELDLAQLSLDDTSSLRGSVLQTKLATSRVILSKTMV FT GNTILREDLLATFLQDSNERAAIDLIRTHVIRGKIRCVASINVPENTGCALAICFNSGI FT TGAADTDIYTTSSQDAIVWNPACEKAVELSFNPNPCSDAWNFVFLQQTKAHFAVQCVTG FT WTTTPLTDLALVLTWHIDRNLCVPETLTISSAHASFPINRWMGKLSFPQGPARVLKRMP FT LAIGGGAGTKDAILMNMPDAVISLHRYFRGDFVFEITKMSSPYIKATIAFFIAFGDITE FT EMTNLEGFPHKLVQFAEIQGRTTITFTQGEFLTAWSTQVLSTVNPQKDGCPHLYALLHD FT SATSTIEGNFIIGVKLLDIRNYGAYGHNPGFEGARLLGISGQSTMVQQLGTYNPIWMVR FT TPLESTAPQNFASFTADLMESTVSGDSTGNWNITAYPSPISNLLKVAAWKKGTIRFQLI FT CRGAAVKQSDWAASARIDLVNNLSNKALPARSWYITKPRGGDIEFDLEIAGPNNGFEMA FT NSSWAFQTTWYLEIAIDNPKQFTLFELNACLMEDIEVAGNTLNPPILLS" XX SQ Sequence 3395 BP; 906 A; 690 C; 743 G; 1056 T; 0 other; gaagatggtt attaaaaatt tctggaaaag aaattattta ataaccatct tcaaggaatc 60 gcgggattcc caccaaagca atcttcaaag caatcttcaa acattttctg ttttccggct 120 ttgcacttta cggccctgtg gtagactgtg caattgcttt tctccctcct ttcttttctt 180 cctctcctcc attttcccat ttgtatgcat ttgtccaatt caactaattt gcattcatgt 240 ggtgtttttg tgaacaagta aacgagtgct ttgaaggtta tcataaagac tactctgttc 300 aaacagtccc tgtggaatat ttggcttcac actatattgt caacaagttt agacctgacc 360 ccttagccgt tctgtggctt ttctgcttgg ggatttggtg ggagattatt caaatacttc 420 accatttatt ccagtacaag gaaccagcat tatttattaa tagctgtcag gatcttgctg 480 cttttttaga aaggaaacat tccatggaag tgattcagaa ggaaggtttg gctgcttcag 540 cactcaagga taaggagcga ctggccgaaa aagctgtggt caatcagccc ctgagtaact 600 tgattcctca ttcaaataaa atgtatgagc gaagtaagag tcttctatct ggtcttaagc 660 gtggtttgat aaagcaaaaa gaggtagctt ttgataagct catggggggt tcgacaatag 720 acttccagca tattccaacc ggaactctca cacctggtga gaataaggtg ctagacatac 780 caattgtccc gcaacattta ttgaccagta cgaatataac ggattaccat caggccaata 840 ataagagtgc taatggtgct actgcacttc atgttggagc tatagaagtc atcttagatt 900 gctttacctc tcctgatagt aacatttgtg gtggtatgtt gctggttgat acagcacatt 960 taaacccgga taatgctata agaagtgttt ttgtcgcgcc atttattggt ggtcgcccta 1020 ttcgagtttt gttgtttcca gacactttgg tggaaattgc cccaaacatg aattctcgat 1080 ttaaattgct atgtactact agcaatggcg acgttgcacc agattttaat ttagcgatgg 1140 tcaaagtcaa tgttgcaggt tgtgctgtta gtttgaccaa gacatacact cctacagcct 1200 accttgagca agagctaatt aaagaaaagg gggccattgt tcaatatttg aacaggcaca 1260 ctttttctat gcatcggaat aatcagatga caaaggaaga gatgcaaaag cagtgccttt 1320 cttttaggct ggaaagtgct ctcactttgc aggaaaaaca tcctttgcac gccacctttt 1380 gtaagtcaac caattttgtt tacaagattg gtggagatgc caaagaaggt agtaatggta 1440 gtttgactgt taatgagagt cagttgtcct cacattcttc ttccacacat gttttgcata 1500 agcataacaa cagtggcgat aatgaagtag aattctcgga gattggtgtg gtcgtaccag 1560 gtgctggtag aaccaaggct tatggtcaaa atgaactaga tcttgcgcaa ctttccttgg 1620 atgatactag ttctcttcgt ggatctgtgt tgcaaaccaa attagccaca tcccgtgtca 1680 ttttaagtaa aacaatggtc gggaatacta tccttaggga agatttgctc gccaccttct 1740 tgcaggatag caatgagagg gccgcgatag atttaatccg cacccatgtt ataagaggca 1800 aaatacgctg tgttgcttct atcaatgttc cagagaatac aggttgtgct ttggctattt 1860 gcttcaatag tggcataaca ggagctgctg acacggacat atacaccacg agttctcagg 1920 acgctatagt gtggaatcct gcttgtgaga aggctgttga gttgtcattt aaccccaatc 1980 cctgcagtga tgcctggaac tttgtgtttt tgcagcagac aaaggcacat ttcgcagttc 2040 agtgcgtgac tggatggact acaacaccac ttacagactt ggctctagtg cttacatggc 2100 atatcgatag aaacttgtgc gtgcctgaaa ctttgacgat tagttctgca cacgcttctt 2160 tcccaatcaa tcgctggatg ggaaagttat ctttcccaca agggcctgca cgtgttctaa 2220 aaaggatgcc cttggccatc ggtggtggag ccggcaccaa agatgctatt ctaatgaata 2280 tgccagatgc tgttatttca ctacatcgtt attttagagg ggatttcgtc tttgaaataa 2340 caaagatgag ttctccttac ataaaggcaa ccatcgcttt ctttatagca tttggtgata 2400 tcacagagga aatgaccaat ttggagggtt ttccccacaa gcttgtgcag tttgctgaaa 2460 ttcaggggcg caccaccata acatttacgc aaggcgaatt tttgacggca tggtcaacac 2520 aagttctaag caccgttaat cctcagaaag atggatgtcc ccatttgtat gcactcttgc 2580 atgactctgc tacgtcaacc attgaaggaa atttcattat tggtgttaaa ctgctggaca 2640 ttaggaacta tggtgcttat ggccataacc ccggttttga gggagcccgc ctgttaggaa 2700 tttctgggca gagtactatg gtgcagcagc ttggaactta taatccaatt tggatggttc 2760 gtacgccctt agaaagtacg gccccacaaa attttgcgag ttttactgct gatttgatgg 2820 aatccacagt gagtggggat tctactggaa attggaatat tacagcttat ccgagtccta 2880 tatccaattt gttgaaagtg gctgcttgga agaaggggac aataagattc caactcattt 2940 gccggggtgc tgccgttaag caatccgatt gggctgcgtc agccagaata gacttggtca 3000 ataacctctc aaataaagct ttacctgcgc gctcttggta cattactaag ccacgaggag 3060 gtgatatcga gtttgacttg gaaatagcgg ggccaaataa tggttttgaa atggccaatt 3120 ccagttgggc tttccagact acatggtatt tggaaattgc catagacaac cctaagcaat 3180 tcactctttt cgagttaaat gcttgtctta tggaagacat tgaagtggct ggaaacacct 3240 taaacccacc tattttactt tcttagtctt tgtgttgctt ttccctttcc ttttgtttct 3300 gggttttgtt gtggcttctt tcccagttcg ctttagaagc ctctctttgt aaattttaag 3360 agcttgtttt ctttgatgct tgcccttttg ttttt 3395 //