ID   EU418791; SV 1; linear; genomic RNA; STD; VRL; 1377 BP.
XX
AC   EU418791;
XX
DT   13-FEB-2008 (Rel. 94, Created)
DT   13-FEB-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Tobacco etch virus isolate UWI 3 HC-Pro protein (HC-Pro) gene, partial cds.
XX
KW   .
XX
OS   Tobacco etch virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1377
RA   Spence A.;
RT   "HC-Pro Amplification of TEV Infecting Peppers in Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-1377
RA   Spence A.;
RT   ;
RL   Submitted (21-JAN-2008) to the INSDC.
RL   Department of Basic Medical Sciences, Biochemistry Section, The University
RL   of the West Indies, Molecular Biology Bldg., 4 St. Johns Close, Mona,
RL   Kingston 7, Jamaica
XX
DR   MD5; c243c8e0498c65cf1e716267acdf9edb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Tobacco etch virus"
FT                   /host="Scotch bonnett peppers"
FT                   /isolate="UWI 3"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica:Bodles Agriculture Research Station, St.
FT                   Catherine and UWI Botany Gardens, St. Andrew"
FT                   /db_xref="taxon:12227"
FT   gene            <1..>1377
FT                   /gene="HC-Pro"
FT   CDS             <1..>1377
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="HC-Pro protein"
FT                   /db_xref="GOA:B1A3P6"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1A3P6"
FT                   /protein_id="ABZ80929.1"
FT                   /translation="SDKAISEAFFIPYSKKFLELRPDGISHECTRGVSVERCGEVAAIL
FT                   TQALSPCGKITCKRCMVETPDIVEGASGESVTNQGKLLAMLKEQYPDFPMAGKLLTRFL
FT                   QQKSLVNTNLTACASVKQLIGDRKQAPFTHVLAVSEILFKGSRLTGADLEEASTHMLEI
FT                   ARFLNNRTENMRIGHLGSFRNKISSKAHVNNALMCDNQLDQNGNFIWGLRGAHAKRFLK
FT                   GFFTEIDPNEGYEKFVIRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERKEIGNTA
FT                   FQCENGNYVYPCCCVTLENGKAQYSDLKHPTKRHLVIGNSGDSKYLDFPVLNEEKMYIA
FT                   NEGYCYMNIFFALLVNVKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPD
FT                   VLSAELPRILVDHDNKTMHVLDSYGSKTTGYHMLKMNTTSQLIEFVHSGLESEMKTYNV
FT                   G"
XX
SQ   Sequence 1377 BP; 443 A; 267 C; 306 G; 361 T; 0 other;
     agcgacaaag ctatctctga ggcatttttt ataccatact ctaagaaatt tttggagttg        60
     agaccagatg gaatttccca tgagtgtaca agaggagtgt cagttgagcg gtgcggcgaa       120
     gtggctgcaa tcctgacaca agcactttca ccatgtggta agatcacatg taaacgttgc       180
     atggttgaaa cgcctgatat tgttgagggt gcttcgggag aaagtgtcac taaccaaggt       240
     aagctccttg caatgctgaa agaacaatat ccagatttcc caatggccgg aaaattactc       300
     acaaggtttc ttcaacagaa atcactagta aatacaaatt tgacagcctg cgcgagcgtc       360
     aaacaactca ttggtgatcg caaacaagct ccattcacac atgttctggc tgttagcgaa       420
     atcctgttca aaggcagtag actaacaggg gctgatctcg aggaggcaag cacacatatg       480
     cttgaaatag caaggttctt gaacaatcgc actgaaaata tgcgcattgg ccaccttggt       540
     tccttcagaa ataaaatctc atcgaaggcc catgtgaata acgcactcat gtgtgataat       600
     caacttgatc agaatgggaa ctttatttgg ggactaaggg gtgcacacgc gaagaggttt       660
     cttaaaggat tcttcactga gattgatcca aatgaaggat acgagaagtt tgtgatcagg       720
     aaacatatca ggggtagcag aaagctagca attggcaatc tgataatgtc aactgacttc       780
     caaacgctca ggcaacagat tcaaggcgaa actattgagc gtaaagaaat tggaaatact       840
     gcatttcaat gcgaaaacgg taattacgta tacccatgtt gttgtgttac ccttgaaaat       900
     ggtaaggctc aatactcaga tttaaagcac ccaacaaaga gacatctggt cattggcaac       960
     tctggcgatt caaagtacct ggactttcca gttcttaatg aagagaaaat gtatatagct      1020
     aacgaaggtt attgctacat gaacattttc tttgctctac tagtgaatgt caaagaagag      1080
     gatgcaaagg acttcaccaa gtttataagg gacacaattg ttccaaagct tggagcgtgg      1140
     ccaacgatgc aggatgttgc aactgcatgc tacttacttt ctattcttta cccagatgtc      1200
     ctgagtgctg agttacccag aattttggtt gatcatgaca acaaaacaat gcatgttttg      1260
     gattcgtatg ggtctaaaac gacagggtac cacatgttga agatgaacac aacatcccaa      1320
     ctaattgaat tcgttcattc aggattggaa tccgaaatga aaacttataa tgttgga         1377
//