ID   EU418783; SV 1; linear; genomic RNA; STD; VRL; 1377 BP.
XX
AC   EU418783;
XX
DT   13-FEB-2008 (Rel. 94, Created)
DT   13-FEB-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Tobacco etch virus isolate Bodles 5 HC-Pro protein (HC-Pro) gene, partial
DE   cds.
XX
KW   .
XX
OS   Tobacco etch virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1377
RA   Spence A.;
RT   "HC-Pro Amplification of TEV Infecting Peppers in Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-1377
RA   Spence A.;
RT   ;
RL   Submitted (21-JAN-2008) to the INSDC.
RL   Department of Basic Medical Sciences, Biochemistry Section, The University
RL   of the West Indies, Molecular Biology Bldg., 4 St. Johns Close, Mona,
RL   Kingston 7, Jamaica
XX
DR   MD5; 1d5676ba726eee624628a5eb69f88e71.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Tobacco etch virus"
FT                   /host="Scotch bonnett peppers"
FT                   /isolate="Bodles 5"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica:Bodles Agriculture Research Station, St.
FT                   Catherine and UWI Botany Gardens, St. Andrew"
FT                   /db_xref="taxon:12227"
FT   gene            <1..>1377
FT                   /gene="HC-Pro"
FT   CDS             <1..>1377
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="HC-Pro protein"
FT                   /db_xref="GOA:B1A3N8"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1A3N8"
FT                   /protein_id="ABZ80921.1"
FT                   /translation="SDKAISEAFFIPYSKKFLELRPDGISHECTRGVSVERCGEVAAIL
FT                   TQALSPCGKITCKRCMVETPDIIEGESGESVTNQGKLLAMLKEQYPDFPMAEKLLTRFL
FT                   QQKSLVNTNLTACVSVKQLIGDRKQAPFTHVLAVSEILFKGSKLTGADLEEASTHMLEI
FT                   ARFLNNRTENMRIGHLGSFRNKISSKAHVNNALMCDNQLDQNGNFVWGLRGAHAKRFLK
FT                   GFFTEIDPNEGYDKYVVRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERKEIGNHC
FT                   ISMRNGNYVYPCCCVTLEDGKAQYSDLKHPTKRHLVIGNSGDSKYLDFPVLNEEKMYIA
FT                   NEGYCYMNIFFALLVNVKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPD
FT                   VLSAEVPRILVDHDNKTMHVLDSYGSRTTGDHMLKMNTTSQLIEFLHSGLESEMKTYYV
FT                   G"
XX
SQ   Sequence 1377 BP; 437 A; 260 C; 313 G; 367 T; 0 other;
     agcgacaaag caatctctga ggcatttttt ataccatact ctaagaaatt tttggagttg        60
     agaccagatg gaatttccca tgagtgtaca agaggagtct cagttgagcg gtgcggtgaa       120
     gtggctgcaa tcttgacaca agcactttca ccatgtggta agatcacatg taaacgttgt       180
     atggttgaga cacctgacat tattgagggt gaatcaggag aaagtgtcac taaccaaggc       240
     aagcttcttg caatgctgaa ggagcagtac ccagattttc caatggctga gaaattgcta       300
     acaaggtttc tgcaacagaa atcgttggtg aacacaaatt tgacagcctg tgtgagtgtc       360
     aaacaactca ttggtgatcg taaacaagct ccattcacac acgtactagc tgttagtgaa       420
     attctgttca aaggcagtaa acttacagga gccgatctcg aagaagcaag cacacatatg       480
     cttgagattg caaggttttt gaataatcgc actgaaaaca tgcgcattgg ccaccttggc       540
     tccttcagaa ataaaatttc atcgaaggcc catgtgaaca acgcactcat gtgtgataat       600
     caacttgatc agaatggaaa tttcgtttgg ggcttaaggg gtgcacacgc aaagagattt       660
     cttaaaggat ttttcactga gattgatcca aatgaagggt acgacaagta tgtggtcagg       720
     aaacatatca ggggtagcag aaagctagca attggcaatt tgataatgtc aactgacttc       780
     cagacgctca ggcaacagat ccaaggtgaa acaattgagc gtaaagaaat tggaaatcac       840
     tgcatttcaa tgcgaaatgg caattatgtg tacccatgtt gttgcgtaac cctggaagat       900
     ggcaaggctc aatattcaga tttgaagcac ccaacgaaga gacacttggt cattggcaac       960
     tctggtgatt caaaatacct cgattttcca gttcttaatg aagagaaaat gtacatagct      1020
     aatgagggtt attgctatat gaacattttc tttgctttac tggtgaatgt caaggaagag      1080
     gatgcaaagg acttcaccaa gtttataagg gatacaattg tcccaaagct tggggcgtgg      1140
     ccaacaatgc aggatgttgc tactgcatgc tacttactct ctattcttta cccagatgtc      1200
     ctgagtgctg aagtacccag aatcttagtc gatcatgata acaaaacaat gcatgtttta      1260
     gattcgtatg ggtctagaac gacaggagac cacatgttga agatgaatac aacatcccag      1320
     ctaattgaat ttcttcattc aggcctagaa tccgagatga agacttacta tgttgga         1377
//