ID   EU418782; SV 1; linear; genomic RNA; STD; VRL; 1377 BP.
XX
AC   EU418782;
XX
DT   13-FEB-2008 (Rel. 94, Created)
DT   13-FEB-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Tobacco etch virus isolate Bodles 4 HC-Pro protein (HC-Pro) gene, partial
DE   cds.
XX
KW   .
XX
OS   Tobacco etch virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1377
RA   Spence A.;
RT   "HC-Pro Amplification of TEV Infecting Peppers in Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-1377
RA   Spence A.;
RT   ;
RL   Submitted (21-JAN-2008) to the INSDC.
RL   Department of Basic Medical Sciences, Biochemistry Section, The University
RL   of the West Indies, Molecular Biology Bldg., 4 St. Johns Close, Mona,
RL   Kingston 7, Jamaica
XX
DR   MD5; 4482434804bc10bdd1ed33e10646d6ba.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Tobacco etch virus"
FT                   /host="Scotch bonnett peppers"
FT                   /isolate="Bodles 4"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica:Bodles Agriculture Research Station, St.
FT                   Catherine and UWI Botany Gardens, St. Andrew"
FT                   /db_xref="taxon:12227"
FT   gene            <1..>1377
FT                   /gene="HC-Pro"
FT   CDS             <1..>1377
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="HC-Pro protein"
FT                   /db_xref="GOA:B1A3N7"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1A3N7"
FT                   /protein_id="ABZ80920.1"
FT                   /translation="SDKSISEAFFIPYSHKFLELRPDGISHECTRGVSVERCGEVAAIL
FT                   TQALSPCGKITCKRCMVETPDIVEGESGESVTNQGKLLAMLKEQYPDFPMAEKLLTRFL
FT                   QQKSLVNTNLTACVSVKQLIGDRKQAPFTHVLAVSEILFKGNKLTGADLEEASTHMLEI
FT                   ARFLNNRTENMRIGHLGSFRNKISSKAHVNNALMCDNQLDQNGNFIWGLRGAHAKRFLK
FT                   GFFTEIDPNEGYDKYVIRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERKEIGNHC
FT                   ISMRNGNYVYSCCCVTLEDGKAQYSDLKHPTKRHLVIGNSGDSKYLDLPVLNEEKMYIA
FT                   NEGYCYMNIFFALLVNVKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPD
FT                   VLRAELPRILVDHDNKTMHVLDSYGSRTTGYHMLKMNTTSQLIEFVHSGLVSEMKTYNV
FT                   G"
XX
SQ   Sequence 1377 BP; 444 A; 269 C; 305 G; 359 T; 0 other;
     agcgacaaat caatctctga ggcattcttc ataccatact ctcataaatt cttggagttg        60
     agaccagatg gaatttccca tgagtgtaca agaggagtat cagttgagcg gtgcggtgag       120
     gtggctgcaa tcctgacaca agcactttca ccgtgtggta agatcacatg caaacgttgc       180
     atggttgaaa cacctgacat tgttgagggt gagtcgggag aaagtgtcac caaccaaggt       240
     aagctcctag caatgctgaa agaacagtac ccagatttcc caatggccga aaaattgctc       300
     acaaggtttt tgcaacagaa atcactagta aatacaaatt tgacagcctg cgtgagcgtc       360
     aaacaactta ttggtgaccg caaacaagct ccattcacac atgtactggc tgtcagcgaa       420
     attctgttca aaggcaataa actaacaggg gctgatctcg aagaggcaag cacacatatg       480
     cttgaaatag caaggttctt gaacaatcgc actgaaaata tgcgcattgg ccaccttggt       540
     tctttcagaa ataaaatctc atcgaaggcc catgtgaata acgcactcat gtgtgataat       600
     caacttgatc agaatgggaa ttttatttgg ggactaaggg gtgcacacgc aaagaggttt       660
     cttaaaggat ttttcactga gattgaccca aatgaaggat acgataagta tgttatcagg       720
     aaacatatca ggggtagcag aaagctagca attggcaatt tgataatgtc aactgacttc       780
     cagacgctca ggcaacaaat tcaaggcgaa actattgagc gtaaagaaat tgggaatcac       840
     tgcatttcaa tgcggaatgg taattacgtg tattcatgtt gttgtgttac tcttgaagat       900
     ggtaaggctc aatattcgga tctaaagcac ccaacgaaga gacatctggt cattggcaac       960
     tctggcgatt caaagtacct agaccttcca gttctcaatg aagagaaaat gtatatagct      1020
     aatgaaggtt attgctacat gaacattttc tttgctctac tagtgaatgt caaggaagag      1080
     gatgcaaagg acttcaccaa gtttataagg gacacaattg ttccaaagct tggagcgtgg      1140
     ccaacaatgc aagatgttgc aactgcatgc tacttacttt ccattcttta cccagatgtc      1200
     ctgagagctg aactacccag aattttggtt gatcatgaca acaaaacaat gcatgttttg      1260
     gattcgtatg ggtctagaac gacaggatac cacatgttga aaatgaacac aacatcccag      1320
     ctaattgaat tcgttcattc aggtttggtg tccgaaatga aaacttacaa tgttgga         1377
//