ID   EU418779; SV 1; linear; genomic RNA; STD; VRL; 1377 BP.
XX
AC   EU418779;
XX
DT   13-FEB-2008 (Rel. 94, Created)
DT   13-FEB-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Tobacco etch virus isolate Bodles 1 HC-Pro protein (HC-Pro) gene, partial
DE   cds.
XX
KW   .
XX
OS   Tobacco etch virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1377
RA   Spence A.;
RT   "HC-Pro Amplification of TEV Infecting Peppers in Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-1377
RA   Spence A.;
RT   ;
RL   Submitted (21-JAN-2008) to the INSDC.
RL   Department of Basic Medical Sciences, Biochemistry Section, The University
RL   of the West Indies, Molecular Biology Bldg., 4 St. Johns Close, Mona,
RL   Kingston 7, Jamaica
XX
DR   MD5; 174f400be15a66eda461b694e8262bde.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Tobacco etch virus"
FT                   /host="Scotch bonnett peppers"
FT                   /isolate="Bodles 1"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica:Bodles Agriculture Research Station, St.
FT                   Catherine and UWI Botany Gardens, St. Andrew"
FT                   /db_xref="taxon:12227"
FT   gene            <1..>1377
FT                   /gene="HC-Pro"
FT   CDS             <1..>1377
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="HC-Pro protein"
FT                   /db_xref="GOA:B1A3N4"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1A3N4"
FT                   /protein_id="ABZ80917.1"
FT                   /translation="SDKSISEAFFIPYSTKFLELRPDGISHECTRGVSVERCGEVAAIL
FT                   TQALSPCGKITCKRCMVETPDIVEGESGESVTNQGKLLAMLKEQYPDFPMAEKLLTRFL
FT                   QQKSLVNTNLTACVSVKQLIGDRKQAPFTHVLAVSEILFKGNKLTGADLEEASTHMLEI
FT                   ARFLNNRTENMRIGHLGSFRNKISSKAHVNNALMCDNQLDQNGNFIWGLRGAHAKRFLK
FT                   GFFTEIDPNEGYDKYVIRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERREIGNHC
FT                   ISMRNGNYVYSCCCVTLEDGKAQYSDLKHPTKRHRVIGNSGDSKYLDLPVLNEEKMYIF
FT                   NEGYCYMNIFFALLVKVKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPD
FT                   VLSAELPRILVDHDNETMHVLDSYGSTTTGYHILKMNTTSQLIELVHSGLVSEMKTFNV
FT                   G"
XX
SQ   Sequence 1377 BP; 442 A; 258 C; 307 G; 370 T; 0 other;
     agcgacaaat caatctctga ggcattcttc ataccatact ccactaaatt cttggagttg        60
     agaccagatg gaatttccca tgagtgtaca agaggagtat cagttgagcg gtgcggtgag       120
     gtggctgcaa tcctgacaca agcactttca ccgtgtggta agatcacatg taaacgttgc       180
     atggttgaaa cacctgacat tgttgagggt gagtcgggag aaagtgtcac taaccaaggc       240
     aagctccttg caatgttgaa agaacagtac ccagatttcc caatggctga aaaattgctc       300
     acaaggtttt tgcaacagaa atcactagta aatacaaatt tgacagcctg cgtgagcgtc       360
     aaacaactta ttggtgatcg caaacaagct ccattcacac atgtactggc tgttagcgaa       420
     attctgttca aaggcaataa actaacaggg gctgatctcg aagaagcaag cacgcatatg       480
     cttgaaatag caaggttctt gaacaatcgc actgaaaata tgcgcattgg ccaccttggt       540
     tccttcagaa ataaaatatc atcgaaggcc catgtgaata acgcacttat gtgtgataat       600
     caacttgatc agaatgggaa ttttatttgg ggactaaggg gtgcacacgc aaagaggttt       660
     cttaaaggat tcttcactga gattgaccca aatgaaggat acgataagta tgtaatcagg       720
     aaacatatca ggggtagcag aaagctagca attggcaatt tgataatgtc aactgatttc       780
     cagacgctca ggcaacaaat tcaaggcgaa actattgagc gtagagaaat tgggaatcac       840
     tgcatttcaa tgcgaaatgg taattacgtg tattcatgtt gttgcgttac ccttgaagat       900
     ggtaaggctc aatattcaga tttaaaacac ccaacaaaga gacatcgggt cattggcaac       960
     tctggcgatt caaagtacct ggatcttcca gttcttaatg aagagaaaat gtatatattt      1020
     aatgaaggtt attgctatat gaacattttc tttgctctac tagtgaaagt caaagaagag      1080
     gatgcaaagg acttcaccaa gtttataagg gacacaattg ttccaaagct tggagcgtgg      1140
     ccaacgatgc aggatgttgc aactgcatgc tacttacttt ctattcttta cccagatgtc      1200
     ctgagtgctg agttacccag aattttggtt gatcatgaca acgaaacaat gcatgttttg      1260
     gattcgtatg ggtctacaac gacagggtac cacattttga agatgaacac aacatcccag      1320
     ctaattgaat tggttcattc aggattggtg tccgaaatga aaacttttaa tgttgga         1377
//