ID EU414800; SV 1; linear; genomic RNA; STD; VRL; 2859 BP. XX AC EU414800; XX DT 02-JAN-2012 (Rel. 111, Created) DT 02-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Cucumber mosaic virus isolate CMV-QZ segment RNA2 2a protein (2a) and 2b DE protein (2b) genes, complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2859 RA Liu Y., Gao R., Li X.; RT ; RL Submitted (17-JAN-2008) to the INSDC. RL Department of Plant Pathology, Shandong Agricultural University, No. 61, RL Daizong Street, Tai'an, Shandong 271018, China XX DR MD5; a3a01a7424414289d2f551c566fbabfc. XX FH Key Location/Qualifiers FH FT source 1..2859 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="tobacco" FT /isolate="CMV-QZ" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT 5'UTR <1..66 FT gene 67..2643 FT /gene="2a" FT CDS 67..2643 FT /codon_start=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:G8XQM0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:G8XQM0" FT /protein_id="ACB56620.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVPEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSLISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYTNGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAGNLQFYDHMIKSDVKPVVSDTLNIDRSVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVENKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSSTKQRKKKDGIERRRNDKRRTPTGSYGGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQAVPLPTILSSGWFGTDRDVPPCEHGGIVRV" FT gene 2402..2737 FT /gene="2b" FT CDS 2402..2737 FT /codon_start=1 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:O39437" FT /protein_id="ACB56621.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYHHVNMVGLSESEAPCFTLPAEEDHDFDDTDWFAGN FT EWAEGSF" FT 3'UTR 2738..2859 XX SQ Sequence 2859 BP; 707 A; 640 C; 680 G; 832 T; 0 other; gagcgtacgg ttcaacccct gcctcccctg taaaactccc tagactttct agtttctttc 60 tttcctatgg ctttccccgc ccccgctttc tcactagcca atcttttgaa cggtagttac 120 ggtgtcgaca ctcccgagga agtggaacgc gtgcgatctg agcaacgcga agaggctgct 180 gcggcctgtc gtaattacag gcccttaccc gctgtggatg tcagcgagag tgtcccagag 240 gatgcgcatt ccctccgaac tccagacgga gctccctccg aagaggtgtc tgtagagttt 300 gttacttatg gtgctgaaga ttaccttgaa aaatctgatg atgagctcct tgtcgctttt 360 gagacgatgg tcaaacccat gcgtatcgga caactgtggt gccctgcgtt taataaatgt 420 tctcttattt ccagcattgc catggccagg gctttgctat tagcacccag aacatcccac 480 cgaaccatga agtgttttga ggacctggtc gcggctattt acactaaatc cgatttctat 540 tacgatgatg agtgtgaagc cgacgacgtt cagatagata tctcgtctcg cgatgtaccc 600 ggttattctt tcgaaccgtg gtcccgaacg tctggatttg aaccgccacc tatttgtgag 660 gcgtgtgaca tgatcatgta ccagtgcccg tgttttgatt tcaatgcttt aaagaaatcg 720 tgcgctgaga ggacattcgc tgatgattat gttatcgaag gtttagatgg tgttgtagac 780 aatgcgactc tgttgtcgaa tttaggccca tttttggtgc ccgtgaaatg tcagtatgag 840 aaatgtccaa cacccaccgt tgcgaatcct ccgagtctta atcgtgctac tgatcgtgtt 900 gatatcaatt tagttcaatc catttgtgac tcgactctgc ccactcatag taactacgac 960 gactctttcc atcaagtgtt cgtcgagagt gctgactatt ctattgatct ggatcatgtt 1020 agacttcgcc agtctgatct tattgcaaaa atcccagatt cagggcatat gataccggtt 1080 ttgaacaccg ggagcggtca caagagagta ggtacgacga aggaggtcct tacagctatc 1140 aagaaacgta atgctgacgt tccagagcta ggtgattccg ttaatctgtc cagattgagt 1200 aaggctgtgg ctgagagatt cttcatttca tacactaatg gtaactctct agcatccagc 1260 aactttgtta atgtcgttag taacttccac gattacatgg aaaaatggaa gtcctcaggt 1320 ctttcgtatg atgatcttcc ggatcttcat gctggaaatt tgcagtttta tgatcacatg 1380 ataaaatctg atgtgaaacc tgtagtgagc gacacactca acattgacag atcggttccg 1440 gctactataa cgtatcataa gaaaggtata acctcccagt tctcaccgtt gtttactgcg 1500 ctatttgagc gtttccagag atgccttcga gaacgcatta ttcttcctgt tggaaagatt 1560 tcatcccttg agatggcagg atttgatgtt gagaacaagc attgtctcga gattgatttg 1620 tccaaattcg acaagtctca aggtgaattc catctaatga ttcaggaaca cattttgaat 1680 ggtctagggt gcccagctcc gataactaag tggtggtgtg atttccacag attctcttat 1740 attagagacc gtagagctgg cgttggtatg cccatcagtt ttcagagacg aactggtgat 1800 gcatttactt actttggtaa caccattgtc accatggctg aatttgcatg gtgttacgac 1860 accgaccaat tcgaaaagct tttattctca ggcgatgatt ctctaggatt ttcagtactt 1920 cctcctgttg gtgatccgag taagttcacg actctcttca acatggaagc taaggtgatg 1980 gagcccgcag taccatacat ttgttcgaag ttcttactct ctgacgagtt cggtaacact 2040 ttttccgttc cagacccatt gcgcgaggtt cagcggttag gcacgaagaa aatcccctat 2100 tcagacaatg atgagttcct gtttgctcac ttcatgagct ttgttgatcg attgaagttt 2160 ttggaccgaa tgactcagtc ttgtatcgat cagctttctc ttttcttcga gttgaaatac 2220 aggaagtctg gggctgaggc tgctttaatg ctaggcgcct ttaagaaata taccgctaat 2280 tttcagtcct ataaagaact ctactattca gatcgtcgtc agtgcgaatt gatcaattcg 2340 tttagttgtg tagagttaag gattgagcgt tcgagttcca ctaagcagcg aaagaagaaa 2400 gatggaattg aacgaaggcg caatgacaaa cgtcgaactc caactggctc gtatggtgga 2460 ggcgaagagg cagagacgaa ggtctcacaa gcagaatcga cgggaacgag gtcacaaaag 2520 tcccagcgag agggcgcgtt caaatctcag gctgttccgc ttcctaccat tctatcaagt 2580 ggatggttcg gaactgatag agatgtacca ccatgtgaac atggtgggat tgtcagagtc 2640 tgaggcccct tgttttacgt tgccagcgga agaagaccat gatttcgacg atacggattg 2700 gttcgctggt aacgagtggg cggaagggtc gttctgaacc tccccttcct aatctccctc 2760 tggttttctg aggcgggagc tgagttggca gtattgctac aaactgtctg aagtcactaa 2820 acgttttaaa cggtgaacgg gttgtccatc cagcttacg 2859 //