ID EU414798; SV 1; linear; genomic RNA; STD; VRL; 2856 BP. XX AC EU414798; XX DT 02-JAN-2012 (Rel. 111, Created) DT 02-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Cucumber mosaic virus isolate CMV-ND1 segment RNA2 2a protein (2a) and 2b DE protein (2b) genes, complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2856 RA Liu Y., Li X.; RT ; RL Submitted (17-JAN-2008) to the INSDC. RL Department of Plant Pathology, Shandong Agricultural University, No. 61, RL Daizong Street, Tai'an, Shandong 271018, China XX DR MD5; f097ddde5db37e3723743f91762c11ae. XX FH Key Location/Qualifiers FH FT source 1..2856 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="tobacco" FT /isolate="CMV-ND1" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT 5'UTR <1..66 FT gene 67..2643 FT /gene="2a" FT CDS 67..2643 FT /codon_start=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:G8XQL6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:G8XQL6" FT /protein_id="ACB56616.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRIPDGAPSEEVSVESVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSYRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCSCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVFPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERLSSTKQRKKKDGIERRRSDKRRTPTGTYGGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQTVPLPTILSGRWFGIDRDVPPCEHGGVVRV" FT gene 2402..2737 FT /gene="2b" FT CDS 2402..2737 FT /codon_start=1 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:G8XQL7" FT /protein_id="ACB56617.1" FT /translation="MELNEGAVTNVELQLARMVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELIGMYHHVNMVGLSESEAPCFTLPAEEDHDFDDTDWFAGN FT EWAEGSF" FT 3'UTR 2738..2856 XX SQ Sequence 2856 BP; 707 A; 643 C; 680 G; 826 T; 0 other; gagcgtacgg ttcaatccct gcctcccctg taaaactccc tagactttct agtttctttc 60 ttttctatgg ccttccctgc ccccgctttc tcactagcca atcttttgaa cggtagttac 120 ggtgtcgaca ctcccgagga agtggaacgc gtgcgatctg agcaacgcga agaggctgct 180 gcggcctgtc gtaattacag gcccttaccc gctgtggatg tcagcgagag tgtcacagag 240 gatgcgcatt ccctccggat tccagacgga gctccctccg aagaggtgtc tgtagagtct 300 gttacttatg gtgctgaaga ttaccttgaa aaatctgatg atgagctcct tgtcgctttt 360 gagacgatgg tcaaacccat gcgtatcgga caactgtggt gccctgcgtt taataaatgt 420 tcttttattt ccagcatcgc tatggccaga gccttgctgc tagcacccag aacatcctac 480 cgaaccatga agtgttttga agacctggtc gcggctattt acactaaatc cgatttctac 540 tacgatgatg agtgtgaagc cgacgacgtt cagatagata tctcgtctcg cgatgtaccc 600 ggctattctt tcgagccgtg gtcccgaacg tctggatttg aaccaccgcc tatctgcgag 660 gcgtgtgaca tgatcatgta ccagtgctcg tgttttgatt ttaatgcttt aaagaaatcg 720 tgcgctgaga ggacattcgc tgacgattat gttatcgaag gtttagatgg tgttgtcgac 780 aatgcgactc tgttgtcgaa tttaggtcca tttttggtgc ctgtgaagtg tcagtatgag 840 aaatgtccaa cacccaccgt tgcgaatcct ccgagtctta atcgtgctac tgatcgtgtc 900 gatatcaatt tagttcaatc catttgtgac tcgactctgc ccacacatag taactacgac 960 gactcttttc atcaagtgtt tgtcgagagt gcagactatt ctattgatct ggatcatgtt 1020 agacttcgcc agtctgatct tattgcaaaa atcccagatt cagggcatat gataccggtt 1080 ttgaacaccg ggagcggtca caagagagta ggtacgacga aggaggtcct tacagctatc 1140 aagaaacgta atgctgacgt tccagagcta ggtgattccg ttaatctgtc cagattgagc 1200 aaggctgtgg ctgagagatt tttcatttca tacatcaatg gtaactctct agcatccagc 1260 aacttcgtta atgtcgttag taacttccac gattacatgg aaaaatggaa gtcctcaggt 1320 ctttcgtatg atgatcttcc ggatcttcat gctgagaatt tacagtttta tgatcatatg 1380 ataaaatctg atgtgaaacc tgtagtgagc gacacactca atatcgacag accggttccg 1440 gctactataa cgtaccataa gaagggtata acctcccagt tctcaccgtt gtttactgcg 1500 ctatttgagc gtttccagag atgccttcga gaacgcatta ttcttcctgt tggaaagatt 1560 tcatcccttg agatggcagg gtttgatgtt aagaacaagc actgtctcga gattgatttg 1620 tccaaattcg acaagtctca aggtgaattc catctaatga ttcaggaaca tattttgaat 1680 ggtctagggt gcccagctcc gataaccaag tggtggtgcg acttccacag attctcttac 1740 attagagacc gtagagctgg cgttggtatg cccatcagtt tccagagacg aactggtgat 1800 gcattcacct atttcggtaa taccattgtc accatggctg aatttgcatg gtgttacgac 1860 accgaccaat tcgaaaaact tttattctca ggcgatgatt ctctaggatt ttcagtattt 1920 ccccctgttg gtgatccgag taaattcaca actcttttca acatggaagc taaggtgatg 1980 gagcccgcag taccatatat ttgttcgaag ttcttactct ctgacgagtt cggtaacact 2040 ttttccgttc cagatccatt gcgcgaggtt cagcggttag gcacgaagaa aatcccctat 2100 tcagacaacg atgaattcct gtttgctcac ttcatgagct ttgttgatcg attgaagttt 2160 ttggaccgaa tgactcagtc ttgtatcgat cagctttctc tcttcttcga gttgaaatac 2220 aggaagtctg gggctgaggc tgctttaatg ttaggcgcct ttaagaaata taccgctaat 2280 ttccagtcct ataaagaact ctactattca gatcgtcgtc agtgcgaatt gatcaattcg 2340 tttagttgcg tagagttaag gattgagcgt ttgagttcca ctaagcagcg aaagaagaaa 2400 gatggaattg aacgaaggcg cagtgacaaa cgtcgaactc caactggcac gtatggtgga 2460 ggcgaagagg cagagacgaa ggtctcacaa gcagaatcga cgggaacgag gtcacaaaag 2520 tcccagcgag agggcgcgtt caaatctcag actgttccgc ttcctaccat tctatcaggt 2580 agatggttcg gaattgatag ggatgtacca ccatgtgaac atggtggggt tgtccgagtc 2640 tgaggcccct tgttttacgt tgccagcgga agaagaccat gattttgacg atacggattg 2700 gttcgctggt aacgagtggg cggaagggtc gttttgaacc tccccttcca aatctccctc 2760 cggtttctgt ggcgggagct gagttggcag tattgctata aactgtctga agtcactaaa 2820 cgttttacgg tgaacgggtt gtccatccag cttacg 2856 //