ID EU368372; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC EU368372; XX DT 22-JAN-2008 (Rel. 94, Created) DT 31-JAN-2008 (Rel. 94, Last updated, Version 2) XX DE Tomato leaf curl Vietnam virus isolate HA segment DNA A, complete sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Pandey P., Vinh D.N., Mukherjee S.K.; RT ; RL Submitted (28-DEC-2007) to the INSDC. RL Plant Molecular Biology, ICGEB, Aruna Asaf Ali Marg, New Delhi, Delhi RL 110067, India XX DR MD5; f024333603f23c117782ff0bed9f7573. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="HA" FT /mol_type="genomic DNA" FT /country="Viet Nam" FT /db_xref="taxon:208177" FT gene 133..483 FT /gene="AV2" FT CDS 133..483 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B0FZ41" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0FZ41" FT /protein_id="ABY71548.1" FT /translation="MWDPLLNEFPETVHGLRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVYQPCCCPHCPRHKQKEVMGESAHV FT PQAQDVQKLQKP" FT gene 293..1066 FT /gene="AV1" FT CDS 293..1066 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B0FZ42" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0FZ42" FT /protein_id="ABY71549.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTNRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYRSYKSPDVPRGCEGPCKVQSFKGGPDLAHVGKVICVSDVTCGNGVTN FT RVGETFCIKSVYVSGKIGMDENIKTKNHTNTVMFFLVRDRRPFGTPHDFGQVFNMHDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAEYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1063..1467) FT /gene="AC3" FT CDS complement(1063..1467) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="ren" FT /db_xref="GOA:B0FZ43" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B0FZ43" FT /protein_id="ABY71551.1" FT /translation="MDSRTGELITATQAENGVFTWEITNPLYFKITELQNRPFLSDNDI FT VTVRIPFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVNSSHVIKFNLY" FT gene complement(1208..1615) FT /gene="AC2" FT CDS complement(1208..1615) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="suppressor" FT /db_xref="GOA:B0FZ44" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B0FZ44" FT /protein_id="ABY71552.1" FT /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFXAL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPIGQRHSDGQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT gene complement(1515..2603) FT /gene="AC1" FT CDS complement(1515..2603) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:B0FZ45" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0FZ45" FT /protein_id="ABY71553.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKAYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGEPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSEEENNQETED" FT gene complement(2153..2446) FT /gene="AC4" FT CDS complement(2153..2446) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B0FZ46" FT /protein_id="ABY71550.1" FT /translation="MELLTCMFSSNSKGNSNAKTKDSSISHPQAGQHISIRTFRQLKAQ FT QMSKPIWTKTETCLIMEFSRSMEDRLEEVASLQTTHMPRQSIQGPKHRPSIY" XX SQ Sequence 2747 BP; 724 A; 563 C; 614 G; 845 T; 1 other; accggatggc cgcgattttt tttcatgtgg tcccccccac tattatttgt cgggccaata 60 cagacgctcc ctcagagctt atttatgtaa cggtccccta taaaacttgg tccccaagta 120 ctcattccaa acatgtggga tccgctttta aacgagtttc ccgaaactgt tcacggttta 180 aggtgtatgc tagcgattaa atatttgcaa ttagtagaaa atacatactc tcccgataca 240 ttagggtacg atttaatacg tgatttaatc ttagtcattc gtgccaggga ttatgtcgaa 300 gcgtcccgca gatatagtca tttccactcc cgcatccaag gtgcgtcgcc ggctgaactt 360 cgacagcccg tataccaacc gtgctgttgc ccccactgtc ctcgtcacaa acaaaaggag 420 gtcatgggtg aatcggccca tgtaccgcaa gcccaagatg tacagaagtt acaaaagccc 480 tgatgttcca cggggatgtg aaggcccatg taaagtccag tcctttaaag ggggtcctga 540 tttggcccat gtagggaagg taatttgtgt gtctgatgtt acatgtggta acggggtgac 600 taatcgcgtt ggggagacgt tttgtattaa gtcagtttat gtttcgggta agatcgggat 660 ggatgagaac attaagacga agaatcatac taatactgtc atgttctttt tagtacgtga 720 tagaagacct ttcggaactc cccacgattt tggtcaggtg tttaacatgc atgataacga 780 gccaagtaca gccactgtga agaacgataa cagagatcgt tttcaagttc ttcgtcgatt 840 tcaggcaact gttactggtg gtcagtatgc aagcaaggag caagcaatag ttaggaagtt 900 tatgaaggtg aacaaccatg tgacgtataa tcatcaagag gctgcggagt atgataacca 960 cacagagaat gctctgttat tgtatatggc atgtactcat gctagtaatc cagtgtatgc 1020 tactttaaaa atcaggatct atttctatga ttctgttcag aattaataaa gattaaattt 1080 tattacatga gaactgttta caaatgttgt ttgcgttaat gcgtcccata atacataatt 1140 tactgctctt attacattat tcaaactaat tacacccaaa ttattgagaa acttcaaaac 1200 ttgtgtccta aatactctta agaaacgacc agtctgaagg tgtgagttcg tccatatccg 1260 gaagtccaga aaacattggt gcatccccag tgctttcctc aggttgtagt tgaatgggat 1320 cctgaccgtc actatgtcgt tgtccgatag gaagggcctg ttttgtagtt ccgttatctt 1380 gaaatacagg ggatttgtta tctcccaggt aaaaacgcca ttctctgcct gagttgcagt 1440 gatgagttcc cctgtgcgtg aatccatggt tggcgcagtt aagtgcgntg aaataagaac 1500 aaccacaggg aaggtcaatc ctccgtctcc tggttatttt cttcttcgct atcctgtgct 1560 ggactttgat aggtacttga gtacagtggc tcggtgatgc tgacgaagac tgcattcttt 1620 attgcccacg actttaatgc agtattcttt tcttcgtcta ggtattcttt atagcttgag 1680 ttgggccctg gattgcacag gaagatagct ggaatgccac ctttaatttg aactggttct 1740 ccgtactttg tgttgctttg ccagtccctc tgggccccca tgaattcttt aaaatgcttt 1800 aggtagtgcg gatcaacgtc atcaatgacg ttataccagg catcattact gtacactttt 1860 ggactcaaat caagatgacc acacagataa ttgtgtggac ccaatgatcg agcccacatc 1920 gtcttccccg tcctgctatc accctctatt actatactta ttggtcgtaa tggccgcgca 1980 gcggaactga cgacgttctc tgcagcccat tcttcgagtt cctctgggac tcgatcaaac 2040 gaagaagaag aaaaaggcga aacgtaaacc tccattggag gagtaaaaat tctatctaaa 2100 ttactattta aattatggaa ttgtaaaaca aaatctttgg gagctttctc ccttaatata 2160 ttgagggccg atgctttgga ccctgaattg attgcctcgg catatgcgtc gtttgcagac 2220 tggcaacctc ctctagccga tcttccatcg atctggaaaa ctccatgatc aagcacgtct 2280 ccgtctttgt ccatataggc tttgacatct gttgagcttt tagctgcctg aatgttcgga 2340 tggaaatgtg ctgacctgct tggggatgtg agatcgaaga atctttggtt tttgcattgg 2400 aatttccctt cgaattggat gagaacatgc aggtgaggag ttccatcttc gtggaattct 2460 ctgcagatgc ggataaatag tttatttact ggggtttcta ggtttttaag ttgggaaagt 2520 gcttcttctt tagtgagaga gcagtgtgga tatgtgagga aataattttt ggcatttatt 2580 ctgaatttat taggaggagc cattgactgg tcaatcggtg tctcttaaac ttggctatgc 2640 aattggtgtc tggtgtctta tttatatgtg gacaccaaat ggcattatcg taattcccaa 2700 aagaaattca aaattcaaat tggtaaagcg gccatccgta taatatt 2747 //