ID EU365616; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC EU365616; XX DT 01-JAN-2009 (Rel. 98, Created) DT 26-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Cotton leaf curl Multan virus segment DNA-A, complete sequence. XX KW . XX OS Cotton leaf curl Multan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RX DOI; 10.1016/j.virol.2010.06.024. RX PUBMED; 20598726. RA Nawaz-Ul-Rehman M.S., Nahid N., Mansoor S., Briddon R.W., Fauquet C.M.; RT "Post-transcriptional gene silencing suppressor activity of two RT non-pathogenic alphasatellites associated with a begomovirus"; RL Virology 405(2):300-308(2010). XX RN [2] RP 1-2738 RA Rehman M., Mansoor S., Fauquet C.; RT "Symptomless reservoirs of begomoviruses"; RL Unpublished. XX RN [3] RP 1-2738 RA Rehman M., Mansoor S., Fauquet C.; RT ; RL Submitted (23-DEC-2007) to the INSDC. RL Iltab, Danforth Center, 975 North Warson Road, Saint Louis, MO 63132, USA XX DR MD5; 2b342b18232500c3a4fd0a70d652b5ec. DR EuropePMC; PMC2738271; 19570867. DR EuropePMC; PMC3784899; 24426275. DR EuropePMC; PMC6571856; 31091727. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Cotton leaf curl Multan virus" FT /segment="DNA-A" FT /host="Gossypium davidsonii" FT /strain="Rajasthan" FT /mol_type="genomic DNA" FT /country="Pakistan" FT /db_xref="taxon:223252" FT gene 116..481 FT /gene="AV2" FT CDS 116..481 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /note="movement protein" FT /db_xref="GOA:B8Q6S0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8Q6S0" FT /protein_id="ACA96956.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT EAQNVSDVQKSGCSKGL" FT gene 276..1046 FT /gene="AV1" FT CDS 276..1046 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:B8Q6S1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8Q6S1" FT /protein_id="ACA96957.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFESRQIRQCIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1049..1453) FT /gene="AC3" FT CDS complement(1049..1453) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /note="replication enhancer protein" FT /db_xref="GOA:B8Q6S2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8Q6S2" FT /protein_id="ACA96960.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVLNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNYNTRKALGLHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY" FT gene complement(1146..1598) FT /gene="AC2" FT CDS complement(1146..1598) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /note="trAP" FT /db_xref="GOA:B8Q6S3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8Q6S3" FT /protein_id="ACA96959.1" FT /translation="MRSSSHLIDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYNLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGPKSPLFQDHQPRQPSIHDEYGYTHDQDPVQLQH FT SESSGTAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISEQSRCNFN" FT gene complement(1495..2583) FT /gene="AC1" FT CDS complement(1495..2583) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="replication-associated protein" FT /db_xref="GOA:B8Q6S4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8Q6S4" FT /protein_id="ACA96958.1" FT /translation="MPPKRNGFYSKNYFITYPKCSLTKEEALSQLLNIQTPTSKKYIRI FT CRELHEDGTPHLHVLIQFEWKFKCQNMRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIE FT KDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDRIFQEPPAPYISPFSSSSFDQVPEELEEWVSENVVDAAARPHRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLDRPLY FT SGTNQSTAQGSEEAQQEEESRS" FT gene complement(2127..2429) FT /gene="AC4" FT CDS complement(2127..2429) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8Q6S5" FT /protein_id="ACA96961.1" FT /translation="MGLLTCMFSSSSNGNSSARICDSSTWSPQAGQHISIRTYRELNPA FT RTSNPTSRRTGTFSTGGNFRSTEGQQEEGNRQPMTLTPQHLTQAVSQRLLESLRN" XX SQ Sequence 2738 BP; 717 A; 553 C; 641 G; 827 T; 0 other; accggatggc cgcgcgattt ttttgtgggc ccccgattta tgagattgct ccctcaaagc 60 taaataacgc tcccgcacac tataagtact tgcgcactaa gtttcaaatt caaacatgtg 120 ggatccacta ttaaacgaat tccctgatac ggttcacggg tttcggtgta tgctttctgt 180 gaaatatttg caacttttgt cgcaggatta ttcaccggat acgcttgggt acgagttaat 240 acgggattta atttgtattt tacgctcccg taattatgtc gaagcgagct gccgatatcg 300 tcatttctac gcccgcgtcg aaagtacgcc ggcgtctgaa cttcggcagc ccatacacca 360 gccgtgctgc tgcccccatt gtccgcgtca caaaacaaca ggcatggaca aacaggccta 420 tgaacaggaa gcccagaatg tatcggatgt acagaagtcc ggatgttcca aagggttgtg 480 aaggcccatg taaggtacag tcgtttgagt cgagacagat tcgtcaatgt attggtaagg 540 taatgtgtat ttcggatgtt acgcgtggag tcggtttgac ccatcgtata ggtaagcgtt 600 tttgtgtcaa gtcagtttat gttttaggta agatatggat ggacgagaac atcaagacca 660 agaaccatac gaattcggtg atgtttttcc ttgttcgcga tcgacgaccg gtagataaac 720 ctcaggattt tggtgaggta tttaacatgt ttgacaacga acccagtaca gcaactgtga 780 aaaatagtca tagggaccgt taccaggtgt tgaggaaatg gcatgcaacc gttacgggtg 840 gtcaatatgc tagtaaggaa caggctttgg tcaagaagtt tgtcagagtt aacaattatg 900 ttgtttacaa tcaacaggaa gcagggaaat acgagaatca tacggaaaat gcgttaatgc 960 tttatatggc ttgtactcac gctagcaacc ctgtttatgc tacgttgaag attaggatat 1020 atttttatga ctctgtaacg aattgatatt aataaagttt gaattttatt tctgaatatt 1080 gatctacata catagtttgt tggattacat tgtacaatac atgttctaca gctttaataa 1140 ctaaattaat tgaaattaca ccgagattgt tcagatattt gaggacttgg gttttgaata 1200 cccttaagaa aagaccagtc tgagggtgta aggtcgtcca gattcggaag gttagaaaac 1260 acttgtgcag tcccagagct ttccgagtgt tgtagttgaa ctggatcctg atcgtgagta 1320 tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa taaaggggat 1380 ttaggacctc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg ggttcccctg 1440 tgcgtgaatc catggttgtg gcagttgatt gacagattat aagaacaccc gcattcaaga 1500 tctactctcc tcctcctgtt gcgcctcttc gcttccctgt gctgtacttt gattggtacc 1560 tgagtacagg ggtctatcaa gtgtgatgaa gatcgcattc tttactgccc agttttttag 1620 tgcggtgttc ttttcctcgt ctaggaattc tttataactg ctgtttggac caggattgca 1680 gaggaagatt gttggtatcc cgcctttaat ttgaactggc ttcccgtact ttgtgttgga 1740 ttgccagtcc ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat gcgggtcgac 1800 gtcatcaatg acattatacc aggcgtcgtt actgtagacc ttgggactca ggtccagatg 1860 tccacacaaa tagttatgtg gtcccaatga cctagcccac atcgtcttcc ccgtacgact 1920 atctccttca atcactatac tttgaggtct gtgtggccgc gcagcggcat cgacaacgtt 1980 ttcggagacc cactcttcaa gttcttctgg aacttgatcg aaagaagaag aagaaaaagg 2040 agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat ttaaattatg 2100 aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag cctctgactt 2160 actgcctgcg ttaagtgctg cggcgtaagc gtcattggct gtctgttgcc ctcctcttgc 2220 tgaccttccg tcgatctgaa attgccccca gtcgagaatg tccccgtcct tctcgatgta 2280 ggatttgacg tccgagctgg atttagctcc ctgtatgttc ggatggaaat gtgctgacct 2340 gcttggggag accaagtcga agaatcgcat attctggcac ttgaatttcc attcgaactg 2400 gatgagaaca tgcaagtgag gagtcccatc ttcgtgaagc tctctgcaga ttctaatata 2460 tttttttgaa gttggggttt gtatatttaa taattgggaa agtgcttcct ctttggtgag 2520 agaacatttg ggataagtga tgaaatagtt tttggaataa aaaccgttcc gctttggagg 2580 catgttgact aaaattgatc accgattgac cgctcttgca actctccctg gtatatcggt 2640 gatcaatata tagtgatcac caaatggcat aatggtaata aaaaaacttt aatttgaaat 2700 tcaaaccaaa aggctaaagc ggccatccgt ttaatatt 2738 //