ID EU339938; SV 1; circular; genomic DNA; STD; VRL; 2605 BP. XX AC EU339938; XX DT 20-JAN-2008 (Rel. 94, Created) DT 20-JAN-2008 (Rel. 94, Last updated, Version 1) XX DE Rhynchosia golden mosaic virus segment DNA-A, complete sequence. XX KW . XX OS Rhynchosia golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2605 RA Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L., RA Arguello-Astorga G.R.; RT "New strains of Rhynchosia golden mosaic virus (RhGMV) isolated from RT soybean and weeds in Sinaloa, Mexico"; RL Unpublished. XX RN [2] RP 1-2605 RA Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L., RA Arguello-Astorga G.R.; RT ; RL Submitted (13-DEC-2007) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa Sn Jose 2055, San Luis Potosi, S.L.P. RL 78216, Mexico XX DR MD5; 63ad2b28a6a4891bb9cb56eb43573b38. XX FH Key Location/Qualifiers FH FT source 1..2605 FT /organism="Rhynchosia golden mosaic virus" FT /segment="DNA-A" FT /host="Rhynchosia minima" FT /mol_type="genomic DNA" FT /country="Mexico" FT /db_xref="taxon:117198" FT gene 188..943 FT /gene="AR1" FT CDS 188..943 FT /codon_start=1 FT /gene="AR1" FT /product="capsid protein" FT /note="CP; encapsidation of viral genome" FT /db_xref="GOA:B0FN59" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0FN59" FT /protein_id="ABY65912.1" FT /translation="MPKRDAPWRLMAGTSKVSRSANYSPGAGTGPKSNRASAWVNRPMY FT RKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVTHVGKVLCISDITRGSGITHRVGKRF FT CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAAKHENHTENAL FT LLYMACTHASNPVYATLKIRVYFYDSIMN" FT gene complement(940..1338) FT /gene="AL3" FT CDS complement(940..1338) FT /codon_start=1 FT /gene="AL3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:B0FN60" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B0FN60" FT /protein_id="ABY65915.1" FT /translation="MDSRTGEPITAPQATNGVFIWEVPNPLYFKIIRVEVPLHTHSEVF FT HIQIRANHNLRRALDLHKAFFNFQVWTTLTTASGQIYLSRFKLLVMSYLDNLGVISVNN FT VIRAVAFATDKHYVSDVLENHEIKYKLY" FT gene complement(1085..1501) FT /gene="AL2" FT CDS complement(1085..1501) FT /codon_start=1 FT /gene="AL2" FT /product="TrAP" FT /note="transcriptional regulator of late genes; silencing FT supressor" FT /db_xref="GOA:B0FN61" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B0FN61" FT /protein_id="ABY65914.1" FT /translation="MTGHNKTPSSSPLRNRPSPLSIKAQHRYAKRQTRRKRIDLQCGCS FT IYVHINCANHGFTHRGTHHCASSNEWRFYLGGSKSPIFQDNQSGGPITHAQRGLPHSNQ FT SQPQPTESVGSPQSLLQFPSLDDIDDSFWADLFK" FT gene complement(1395..2471) FT /gene="AL1" FT CDS complement(1395..2471) FT /codon_start=1 FT /gene="AL1" FT /product="replication initiation protein" FT /note="RCR-initiator protein; Rep" FT /db_xref="GOA:B0FN62" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0FN62" FT /protein_id="ABY65913.1" FT /translation="MPLPKRFRLNAKNYFLTYPQCSISKEDALEQIQRLTTPVNKKFIK FT ICRETHEDGQPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQIDGRSARGGQQSANDTYAKALNATSAEAALQIIKEEQPQHFFLQFH FT NLITNANRIFQKPPEPWVPPFQQSSFNNVPPIITQWVNQNVCDSAARPLRPISIVIEGP FT SRTGKTQWARSLGPHNYLCGHLDLNQKVYSNNAWYNVIDDVNPHYLKHFKEFMGAQRDW FT QSNCKYGKPIQIKGGIPAIFLCNPGPHSSYKEYLSEEKNKSLNDWAQQNAIFITIEEPS FT FTTVDQGSTQIRQETNEA" FT gene complement(2057..2320) FT /gene="AL4" FT CDS complement(2057..2320) FT /codon_start=1 FT /gene="AL4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B0FN63" FT /protein_id="ABY65916.1" FT /translation="MKMGNLIYTCSYSSKENSSARITDSSTWFPQPGQHISIRTYRELN FT PAPTSSPTSTRMETQLNGESSKSTADLLEEVSNLLMTHTQRH" XX SQ Sequence 2605 BP; 624 A; 507 C; 650 G; 824 T; 0 other; accgttggcc gaccggtgcc acgcgccccc cctccgtaca actttatttt gaattaaaga 60 taattctttt gtgttgtcca atgatattgc gtctggcgag tctagttatc cgttccaact 120 tagtgcgcaa gttgttgatt gtccgctatt taaattgaat ttgtggagcc ggtgtcttta 180 attcaaaatg cctaagcggg atgctccgtg gcgtttaatg gcggggacct caaaggtgtc 240 ccgttctgcc aattattccc ctggtgcggg aacgggccct aaatccaata gggcctccgc 300 ttgggtgaat aggcccatgt acaggaagcc caggatttat cggatgtaca gatcccccga 360 tgttccgaaa gggtgtgaag ggccttgtaa ggtccaatcg tttgaatcac gacatgatgt 420 tacccatgtt ggtaaggtcc tttgtatatc cgatattaca cgtggtagtg gtattaccca 480 tcgcgttggt aagcgtttct gtgtgaagtc tgtgtatatc ctaggcaaag tatggatgga 540 cgagaacatc aagttgaaga accacaccaa cagcgtcatg ttttggttgg tgagggatag 600 gagaccatat ggtaccccta tggattttgg ccaagtgttc aacatgtttg acaatgaacc 660 tagtaccgct actgttaaga acgatttgcg tgaccgtttt caagttatgc ataagttcta 720 tgccaaggtt acgggtggac agtatgcgag caacgagcaa gcgctggtga agcgtttttg 780 gaaggttaac aattatgtgg tgtacaatca tcaagaagcg gcaaagcacg agaatcacac 840 ggagaacgct ttgttattgt atatggcgtg tactcatgcc tctaatcctg tgtatgcaac 900 tcttaaaatt cgggtctatt tttatgactc gataatgaat taataaagtt tgtattttat 960 ttcatgattt tcaagtacat cgcttacata atgtttatcc gtcgcgaatg caacagctct 1020 aattacattg ttaactgaaa taacacctaa attgtctaaa tacgacatta caagtaattt 1080 gaatctactt aaataaatct gcccagaagc tgtcgtcaat gtcgtccaga cttggaaatt 1140 gaagaaggct ttgtggagat ccaacgctct ccgtaggttg tggttggctc tgatttgaat 1200 gtggaagacc tcgctgtgcg tgtgtaatgg gacctccact ctgattatct tgaaatatag 1260 gggatttgga acctcccaaa taaaaacgcc attcgttgct tgaggcgcag tgatgggttc 1320 ccctgtgcgt gaatccatga ttggcgcagt ttatgtggac gtatattgaa cagccgcact 1380 gcagatcaat tcttttacgc ctcgtttgtc tcttggcgta tctgtgttga gccttgatcg 1440 acagtggtga aggacggttc ctcaatggtg atgaagatgg cgttttgttg tgcccagtca 1500 ttgaggcttt tgttcttctc ttcgctgaga tactccttat atgatgaatg ggggccagga 1560 ttgcagagga agatagcggg aattcctcct ttaatttgaa ttggctttcc gtatttgcag 1620 tttgattgcc aatccctttg ggcccccatg aactctttaa agtgtttcag ataatgcgga 1680 ttgacgtcat cgattacgtt ataccatgca ttatttgagt agactttttg attgagatct 1740 agatgaccac ataggtaatt gtgagggccg agacttcggg cccattgtgt tttgcccgtc 1800 cttgatggtc cctcaataac gattgatata ggtctcaatg gccgcgcggc ggaatcacaa 1860 acgttttgat taacccattg cgtaattatt ggaggaacat tattgaacga agattgttga 1920 aatggaggga cccatggttc cggtggtttc tggaaaatcc tgtttgcgtt tgtgattagg 1980 ttatgaaatt gaaggaagaa atgttggggt tgttcttcct ttatgatctg cagagccgct 2040 tctgcagatg ttgcgtttaa tgcctttgcg tatgtgtcat tagcagattg ctgacctcct 2100 ctagcagatc tgccgtcgat ttggaactct ccccattcaa ttgtgtctcc atccttgtcg 2160 atgtaggact tgacgtcgga gctggattta gctccctgta tgttcggatg gaaatgtgct 2220 gacctggttg gggaaaccag gtcgaagaat ctgttattcg tgcactggaa ttttccttcg 2280 aactgtatga gcacgtgtag atgaggttgc ccatcttcat gtgtttctct gcatatcttg 2340 atgaacttct tgttcactgg agtcgtaagg cgctgtatct gctcgagagc gtcttcttta 2400 gatattgaac attgaggata tgtgaggaag tagttcttgg catttaagcg aaagcgcttt 2460 gggagtggca ttcttgtaat aagaggggtg tacaccgatt ggggctctct caaactggct 2520 gattgtatcg gtgtattggt atccaatata tagcttcttt cttggtatga cttttgacac 2580 gtgggaggcc aacgtatata atatt 2605 //