ID EU339936; SV 1; circular; genomic DNA; STD; VRL; 2604 BP. XX AC EU339936; XX DT 20-JAN-2008 (Rel. 94, Created) DT 20-JAN-2008 (Rel. 94, Last updated, Version 1) XX DE Rhynchosia golden mosaic virus strain 1045 segment DNA-A, complete DE sequence. XX KW . XX OS Rhynchosia golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2604 RA Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L., RA Arguello-Astorga G.R.; RT "New strains of Rhynchosia golden mosaic virus (RhGMV) isolated from RT soybean and weeds in Sinaloa, Mexico"; RL Unpublished. XX RN [2] RP 1-2604 RA Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L., RA Arguello-Astorga G.R.; RT ; RL Submitted (12-DEC-2007) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa Sn Jose 2055, San Luis Potosi, S.L.P. RL 78216, Mexico XX DR MD5; 77dcf4b52ccf149aeef6ba76c0a50ca2. XX FH Key Location/Qualifiers FH FT source 1..2604 FT /organism="Rhynchosia golden mosaic virus" FT /segment="DNA-A" FT /host="soybean" FT /strain="1045" FT /mol_type="genomic DNA" FT /country="Mexico" FT /db_xref="taxon:117198" FT gene 186..941 FT /gene="AR1" FT CDS 186..941 FT /codon_start=1 FT /gene="AR1" FT /product="capsid protein" FT /note="CP; encapsidation of viral genome" FT /db_xref="GOA:Q2L8B6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2L8B6" FT /protein_id="ABY65905.1" FT /translation="MPKRDAPWRLMAGTSKVSRSANYSPGAGTGPKSNRASAWVNRPMY FT RKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVTHVGKVLCISDITRGSGITHRVGKRF FT CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAAKYENHTENAL FT LLYMACTHASNPVYATLKIRVYFYDSIMN" FT gene complement(938..1336) FT /gene="AL3" FT CDS complement(938..1336) FT /codon_start=1 FT /gene="AL3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:B0FN53" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B0FN53" FT /protein_id="ABY65906.1" FT /translation="MDSRTGEPITAVQATNGVFIWEVQNPLFFKIVRVEVPVYTRSKVF FT HIQIRANHNLRRALGLHKAFFNFQVWTTLTTASGQIYLSRFKLLVMSYLDNLGVISVNN FT VIRAVAFVTDKNYVNDVLENHEIKYKLY" FT gene complement(1083..1499) FT /gene="AL2" FT CDS complement(1083..1499) FT /codon_start=1 FT /gene="AL2" FT /product="TrAP" FT /note="transcriptional regulator of late genes; silencing FT supressor" FT /db_xref="GOA:B0FN54" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B0FN54" FT /protein_id="ABY65907.1" FT /translation="MTGHNKTPSSSPLRNRSSPLSIKVQHRYAKRQTRRKRIDLQCGCS FT IYVHINCANHGFTHRGTHHCCSSNEWRFYLGGSKSPIFQDSQGGGPSIHTQQGLPHTNQ FT SQPQPAESVGSPQSLLQFPSLDDFDDSFWADLFK" FT gene complement(1393..2469) FT /gene="AL1" FT CDS complement(1393..2469) FT /codon_start=1 FT /gene="AL1" FT /product="replication initiation protein" FT /note="RCR-initiator protein; Rep" FT /db_xref="GOA:B0FN55" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0FN55" FT /protein_id="ABY65908.1" FT /translation="MPQPRRFRINAKNYFLTYPQCSISKEEALSQLQRLATPVNKKYIK FT ICRETHQDGQPHLHVLIQFEGKYQCSNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDGRSARGGQQSANDTYAKALNATSAEEALQIIKEEQPQHFFLQFH FT NLVTNATRIFQKPPEPWVPPFSQSSFNNVPPIITQWVHQNVCDTAARPLRPISIVIEGQ FT SRTGKTQWARSLGPHNYLCGHLDLNPKIYSNDAWYNVIDDVNPHYLKHFKEFMGAQRDW FT QSNCKYGKPIQIKGGIPAIFLCNPGPHSSYKEYLSEEKNKSLNDWAQQNAIFITIEEPF FT FTTVDQGSTQIRQETNEA" FT gene complement(2055..2312) FT /gene="AL4" FT CDS complement(2055..2312) FT /codon_start=1 FT /gene="AL4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B0FN56" FT /protein_id="ABY65909.1" FT /translation="MGNLIYTCSYSSKENTSARITDSSTWYPQPGQHISIRTYRELNPA FT PTSSPTSTRTETQLNGESSKSTADQLEEVSNLLMTHTQRH" XX SQ Sequence 2604 BP; 628 A; 515 C; 636 G; 825 T; 0 other; accggatggc cgaccgctgc cattgcccct gccgtacaac tttattttga attaaagata 60 tttcttttgc gttgtccaat gatattgcgc ctggcgagtc tagttatccg ctccaactta 120 gtgcgcaagt tgttgactgt ctgctattta aattcaaaat gtggagcctg cttctttaat 180 tcaaaatgcc taagcgggat gcaccgtggc gtttgatggc ggggacctca aaggtgtccc 240 gttctgccaa ttattcacct ggtgcgggaa cgggcccaaa atccaatagg gcctccgctt 300 gggtgaatag gcccatgtat aggaagccca ggatttatcg gatgtacaga tcccccgatg 360 ttccgaaagg gtgtgaaggg ccttgtaagg ttcagtcgtt tgaatcacgc catgatgtta 420 cccatgttgg taaggtcctt tgtatatccg atattacacg tgggagcggt attacccacc 480 gcgttggtaa acgtttttgt gtgaagtctg tgtatattct aggcaaagta tggatggacg 540 agaacatcaa gttgaagaac cacaccaaca gcgtcatgtt ttggttggtg agggatagga 600 gaccatatgg tacgcctatg gattttgggc aggtgtttaa catgtttgac aatgaaccca 660 gtaccgcgac tgttaagaac gatttgcgtg accgttttca agttatgcat aagttctacg 720 ccaaggttac cggtggacag tatgcgagca acgagcaagc gctggttaag cgtttttgga 780 aggttaacaa ctatgtggtc tacaatcatc aggaagcggc aaagtacgag aatcacacgg 840 agaacgcttt gttattgtat atggcatgta cacatgcctc taatcctgtg tatgcaaccc 900 ttaaaattcg ggtctatttt tatgactcga ttatgaatta ataaagtttg tattttattt 960 catgattctc aagtacatca tttacataat ttttgtctgt cacgaatgca acagctctaa 1020 ttacattgtt aactgaaata acccctaagt tgtctaaata agacattaca agtaatttga 1080 atctacttaa ataaatctgc ccagaagctg tcgtcaaagt cgtccagact tggaaattga 1140 agaaggcttt gtggagaccc aacgctctcc gcaggttgtg gttggctctg atttgtatgt 1200 ggaagacctt gctgcgtgtg tatactggga cctccaccct gactatcttg aaaaataggg 1260 gattttgaac ctcccagata aaaacgccat tcgttgcttg aacagcagtg atgggttccc 1320 ctgtgcgtga atccatgatt ggcgcaatta atgtggacgt atattgaaca gccgcactgc 1380 agatcaattc ttttacgcct cgtttgtctc ttggcgtatc tgtgttgaac cttgatcgac 1440 agtggtgaag aacggttcct caatggtgat gaagatggcg ttttgttgtg cccagtcatt 1500 gaggcttttg tttttctcct cgctgagata ctccttatat gatgaatggg ggccaggatt 1560 gcagaggaag atagcgggaa ttcctccttt aatttgaatt ggctttccgt atttgcagtt 1620 tgattgccaa tccctttggg cccccatgaa ttctttaaag tgctttagat aatgcggatt 1680 gacgtcatcg attacgttat accacgcatc attggagtag atttttggat tgagatcgag 1740 atgaccacat aggtaattgt gaggaccgag actccgggcc cattgtgttt tgcccgttct 1800 tgattgtccc tcaataacga tcgatatagg tctcaatggc cgcgcagcgg tatcacaaac 1860 gttttgatga acccattgcg taattattgg aggaacatta ttgaacgatg attgactaaa 1920 tggagggacc catggttccg gtggtttctg aaaaatcctt gttgcgtttg tgactaggtt 1980 gtgaaattga aggaagaaat gttggggttg ttcttccttt atgatctgca gagcctcttc 2040 tgcagatgtt gcgtttaatg cctttgcgta tgtgtcatta gcagattgct gacctcctct 2100 agctgatctg ccgtcgattt ggaactctcc ccattcagtt gtgtctccgt ccttgtcgat 2160 gtaggacttg acgtcggagc tggatttagc tccctgtatg ttcggatgga aatgtgctga 2220 cctggttggg gataccaggt cgaagaatct gttattcgag cactggtatt ttccttcgaa 2280 ctgtatgagc acgtgtagat gaggttgccc atcttgatgt gtttctctac atattttgat 2340 gtatttcttg ttgaccggag ttgcaagacg ctgtaattgt gataacgctt cttctttaga 2400 aatggagcat tgcggatatg tgaggaagta gttcttggca tttatgcgaa agcgtctcgg 2460 ttgtggcatt tttgtaataa gaagggtgta ccccgattga ggctctctca aactggctga 2520 ttatatcggt gtattggtat cctatatata gttcttattc ctttctatcc cttttgacac 2580 gtggaggcca tccgttataa tatt 2604 //