ID EU330450; SV 1; linear; genomic RNA; STD; VRL; 6684 BP. XX AC EU330450; XX DT 16-OCT-2008 (Rel. 97, Created) DT 24-FEB-2009 (Rel. 99, Last updated, Version 3) XX DE Beet necrotic yellow vein virus strain S8 segment RNA 1 DE replication-associated protein gene, complete cds. XX KW . XX OS Beet necrotic yellow vein virus OC Viruses; Riboviria; Benyviridae; Benyvirus. XX RN [1] RP 1-6684 RX DOI; 10.1099/vir.0.007112-0. RX PUBMED; 19218223. RA Koenig R., Loss S., Specht J., Varrelmann M., Luddecke P., Deml G.; RT "A single U/C nucleotide substitution changing alanine to valine in the RT beet necrotic yellow vein virus P25 protein promotes increased virus RT accumulation in roots of mechanically inoculated, partially resistant sugar RT beet seedlings"; RL J. Gen. Virol. 90(Pt 3):759-763(2009). XX RN [2] RP 1-6684 RA Koenig R.; RT ; RL Submitted (05-DEC-2007) to the INSDC. RL Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit, RL Biologische Bundesanstalt fuer Land - und Forstwirtschaft, Messeweg 11, RL Braunschweig D38104, Germany XX DR MD5; c7f3de68b11a430cbb2ed23d080074c7. XX FH Key Location/Qualifiers FH FT source 1..6684 FT /organism="Beet necrotic yellow vein virus" FT /segment="RNA 1" FT /strain="S8" FT /mol_type="genomic RNA" FT /note="European A type" FT /db_xref="taxon:31721" FT CDS 119..6448 FT /codon_start=1 FT /product="replication-associated protein" FT /db_xref="GOA:B6CMI6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR008746" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B6CMI6" FT /protein_id="ACA63016.1" FT /translation="MADSFGFTPMEVLLFGGESVQLLTSDMPIDVQWGFVHSTRCYALW FT KDDLIHLNPLLKYSQRIAKRWERLVSGFVGPVPLDKLLSLLAKLMRYCVNMGVSVQEIY FT LSDAIVSSSYMLHVSRTAGCVSFSWLYAKLSMFASCGKFWVGSSHHTAANMIEGSRAVN FT GPDVAISEMVEAFHLEVKSSLVVTVSLTPREKKILERELGFVPLYKQKSRAPRNHPVLA FT ALREVMRQEYSASCNILNTKLKTLVVGAASREVNCYSSNPSVHYYFANKDSKDLVRTTL FT ELLHSALATKYRNMESGERELMNNLKGCGYIVKRSVENAVYEVVSDKDVAEVLRYAQTV FT ASTKKEAKRKPNTGKRKMIMSEATRRTIELHELSRIVAEEKKIPNHFHFDESDFASVGN FT FTQLVCEDVGYNFSVDAWLHLFEATGAQTAVGYMALPNELLFEHYPISDYYDYWEGVEK FT HGSLGGITVSPLRNGQVVGMPTGVFQPVHFDKTSAGLGIPGSKMGTAERVICHMSDGLG FT NGYNHVKSDWQTLLKHPILSSSKYNFAVEVDLTGRYGCLATFRLTRVTGVKYVARTIKL FT RPEDRYVRVLDLLHIVRSIRLKGHAGLKEPYQYFPVYKREVDTTVSYCFSIAEKSLTVQ FT NIANFIRHHIGGVSLVNKELVSAWRLNPQLVPSFAYAVYFYVVNLRGELDGMLQKLMKK FT GITWADRLKANVSAFLRDMVDPISFLWTWLFERRLVDQIFQDGTDVFYQMDRACVDEKA FT LRLNDHIKITRDFLPADTLLPEGWSLDDWEKAPDSLKTLSAAASLPVECGAVNCVGKSF FT KSVRTLLPPSVVTSPVEQFFKSGGKFRDDAEFAELLSAHYRWQMDNSFCACQVCAALTG FT KTGSQVVECRWKAESMYTFSMSQTEVDDFRNEIKAQSIEKGNRFGEMLIGVHQKIPTQA FT FEVSVRLEYVKGGPGTGKSFLIRSLADPIRDLVVAPFIKLRSDYQNQRVGDELLSWDFH FT TPHKALDVTGKQIIFVDEFTAYDWRLLAVLAYRNHAHTIYLVGDEQQTGIQEGRGEGIS FT ILNKIDLSKVSTHVPIMNFKNPVRDVKVLNYLFGSRMVPMSSVEKGFSFGDIKEFSSLS FT NIPDTKIIHYSDETGEHMMPDYVRGVSKTTVRANQGSTYDNVVLPVLPSDLKLINSAEL FT NLVALSRHRNKLTILLDNDGMNIGAVLKGMLEGVPEELERRDYIVGMYLGLHLPIKKEF FT FFPESEFAKSFRLMVAKYEAFVPYDSDLPTLVSQGDVVVLDIARVENDINDAFDCADFY FT NLVSRPNNCLVVAISECLGVTLEKLDNLMQANAVTLDKYHAWLSKKSPSTWQDCRMFAD FT ALKVSMYVKVLSDKPYDLTYEVDGAGSSVTLHLVGKESDGHFIAAPLSPSLSTNERESG FT DDSKKPADDSDTFDAANLFADKGVSSADIEAFCAYLEKTLMATIMEYDLRLQSWANVVD FT DTDDFYQINISEFRQSTCFGKLLSALEVLKVDVSRKRFISDWLCKNLENKQFRWRWSSS FT VASTSSAGSNVDDDFVNMAGGKTDANVDPADVLRQSFMDYASEFVPILIAESPILMPLV FT EPEPILSKCMVPEFDAFLLIKEFDLDNGADEYQCAYLNESVANRVGDKFVSGVLDTDII FT SPLNLRGHPIAENVKYHSMCVAPAQIYFKRNQWQELQVQQARYLFRKVRNSPSSTQDSV FT ARMVAQLFVSDCLVPNVADTFSASNLWRIMDKAMHDMVTKNYQGQMEEEFTRNAKLYRF FT QLKDIEKPLKDPETDLAKAGQGILAWSKEAHVKFMVAFRVLNDLLLKSLNSNVVYDNTM FT SETEFVGKINAAMNIVPDSAINGVIDAAACDSGQGVFTQLIERHIYAALGISDFFLDWY FT FSFREKYVMQSRYVRAHMSYVKTSGEPGTLLGNTILMGAMLNAMLRGTGPFCMAMKGDD FT GFKRQANLKINDQMLKLIKKETVLDFKLDLNVPITFCGYALSNGHLFPSVSRKLTKIAA FT HRFREYKHFCEYQESLRDWIKNLPKDPAVYADFLECNASLSCRNVDDVQRWLDAIISVS FT RIGREQFMMMFPIREVFMSLPPVEDSLGELSSTKVAVSIGDNVSNVVRKVARVDMKKF" XX SQ Sequence 6684 BP; 1719 A; 1036 C; 1640 G; 2289 T; 0 other; ttactcgtgt actggaacgc ggttaggagt ggctccaaag catcttcttt gaaaatagat 60 tgcgaagtga gttcacctaa gacgacgtcg gtgttttacg agtttttaca taatcaacat 120 ggcagattcg ttcggtttca ctccaatgga ggttttgctt tttggtggtg aatcggttca 180 gttgttaact tcagacatgc ctattgatgt ccagtggggc tttgtacact ccactcgatg 240 ttatgctctc tggaaagacg acttgattca tctcaatccg ctgttgaaat attcacagcg 300 aattgcaaaa cggtgggaaa ggttagtttc gggctttgtt ggcccagtac cgcttgataa 360 gttgttgtct ttgttggcaa aacttatgag gtattgtgtt aacatggggg tgtctgtaca 420 ggagatatat ttgtctgatg ctattgtttc atcgtcttat atgttgcatg tgtctaggac 480 tgcaggttgt gtctctttta gttggttgta tgccaagctg tccatgtttg cttcgtgtgg 540 caagttctgg gtagggtctt cacatcacac ggctgccaac atgattgaag gttcccgtgc 600 tgtgaatggt ccggatgtgg ctatttctga gatggttgaa gccttccatt tagaggtgaa 660 gtcttcactc gttgtaactg tatctttgac tcctagggag aaaaagattt tggagcgaga 720 gctaggtttt gtgccgttgt acaaacagaa aagtagagct ccacgcaatc acccagtgct 780 ggctgctctt cgcgaggtta tgaggcagga gtattctgct agttgtaata ttcttaatac 840 aaagttgaaa acactggtag ttggtgctgc cagtcgtgaa gttaattgtt attcgtctaa 900 tccgtctgta cattactatt ttgctaataa agatagcaag gatttggtaa ggaccactct 960 ggagttgttg catagcgctt tggctacaaa gtaccgcaat atggaaagtg gtgagcgaga 1020 actcatgaat aatttgaagg gttgtggtta tattgtcaaa aggtcggttg aaaatgctgt 1080 ctatgaggtt gtttccgata aagatgttgc cgaagtgtta aggtatgcgc aaactgtcgc 1140 ttcaacgaag aaagaggcga aaaggaaacc taacactgga aagcgaaaaa tgatcatgtc 1200 ggaagcaact cgtagaacaa tcgaactgca tgagttgtcg cgtattgtag ccgaagagaa 1260 gaagattcct aaccatttcc actttgatga aagcgatttt gcttccgttg gtaattttac 1320 tcagttggtt tgtgaagatg ttggttacaa tttttctgtg gatgcttggt tgcatttgtt 1380 cgaggcgacc ggtgcgcaga ctgccgttgg ttatatggca ttgcctaatg aacttttgtt 1440 tgaacattat ccaatatcag attattatga ttattgggag ggtgttgaaa agcatggttc 1500 attgggtggt attactgttt cccctttgcg gaatggacag gttgttggta tgccgactgg 1560 ggtttttcaa cctgttcatt ttgacaagac gtctgctggt ttaggtattc ctggttcaaa 1620 gatgggtact gctgaacgtg ttatatgtca catgtcagat ggacttggaa atggctacaa 1680 tcatgttaaa agtgattggc agacgttgtt gaaacatcct attttgtctt cttcaaagta 1740 taattttgct gttgaagtgg atttaacggg acgttatggt tgtcttgcta cctttcggtt 1800 aactcgtgtg actggagtca agtatgttgc tagaactata aaattgcgtc cagaagatag 1860 gtatgttcgg gtgttggatt tgttacatat tgtgcgtagt attaggttga aagggcatgc 1920 cggcttgaaa gaaccatatc agtattttcc tgtgtataaa cgtgaggtag atacgacggt 1980 gtcttactgt ttttctattg ctgaaaaatc gttgacagta caaaacattg ctaattttat 2040 tagacatcat attggtggtg tttctttagt taacaaagaa ttagtatcgg cgtggcgtct 2100 gaatccccaa cttgttcctt cgttcgcata tgccgtttac ttttatgttg ttaatttgag 2160 aggtgagttg gatgggatgt tgcagaagtt aatgaaaaag ggtatcacat gggcagatag 2220 gttgaaggct aatgtttcag cgtttttgcg agatatggta gatcctatta gttttttgtg 2280 gacgtggtta tttgagagga gattagtcga tcaaattttt caggatggga ctgatgtttt 2340 ttaccagatg gatcgtgctt gtgttgatga gaaggcattg cgtttgaacg atcacattaa 2400 aatcacacga gactttttgc ctgctgacac tttacttcct gaaggatggt ctttagacga 2460 ttgggaaaaa gctcccgata gtttgaagac tctttcggca gctgcttcgt tgccagtaga 2520 gtgcggggcg gtaaattgtg ttggtaagtc gtttaagagc gtgcgtactc tattaccacc 2580 atctgttgtt acttcacctg ttgagcagtt tttcaaatct ggtggtaaat ttagagatga 2640 tgccgagttt gcggaattgt tgagtgcgca ctatcgctgg cagatggaca attctttttg 2700 tgcttgtcag gtttgtgctg ctttgactgg taaaacgggt tctcaagttg ttgaatgcag 2760 atggaaagct gagtctatgt atacattttc tatgtcacaa actgaggttg atgattttag 2820 aaatgagatt aaggctcaat ctattgaaaa gggaaatcgt tttggtgaaa tgttaatagg 2880 tgtacatcag aaaattccta cacaagcctt tgaggtttca gttcgactcg aatatgttaa 2940 aggtgggcct ggtacgggta aatcttttct tataagatca ctggctgacc ctatcaggga 3000 tcttgtggtt gctccgttca taaaattgcg ttctgattat cagaatcaac gagttggtga 3060 tgagcttctt tcttgggact ttcacacgcc tcacaaagca ttggatgtta ctggtaagca 3120 aattattttt gttgatgagt ttacagccta tgattggcgg ttgctagctg tgttggctta 3180 tagaaatcat gcccatacta tttacttagt tggtgatgag cagcaaactg gtattcaaga 3240 gggtcgtgga gaaggaatat cgatacttaa caaaattgat ctgtctaagg tttctacaca 3300 tgttccaatc atgaacttta aaaatcctgt ccgtgatgtt aaggtattaa attatctgtt 3360 cgggtctcgt atggttccta tgtcttccgt tgaaaaggga tttagtttcg gggatattaa 3420 agaattttcg tctttgtcaa atatcccaga cactaaaatc attcattatt ccgatgagac 3480 tggtgaacat atgatgcctg attacgttag gggagtgtca aaaactactg tccgtgctaa 3540 tcagggtagt acctacgata atgttgtttt gcctgtttta ccatctgatt tgaaactgat 3600 taactcagct gagttaaatt tggtagcttt atctcgtcac aggaataagt taaccatttt 3660 attggacaat gatggtatga atattggtgc tgttttgaaa ggcatgcttg agggtgtgcc 3720 ggaagaactc gaaagaaggg attacattgt tgggatgtac cttgggttac atttacctat 3780 taagaaagag ttcttctttc ctgagtctga gtttgctaag tcgtttagat taatggttgc 3840 taagtatgag gcatttgtac cttacgatag tgatctgcca actttggttt cacaaggaga 3900 tgtcgttgtt ttggacatag cacgtgtgga aaacgatatt aatgatgcct ttgattgtgc 3960 agatttctat aatcttgtgt ctcgtcctaa caattgttta gtagtagcta tttcagaatg 4020 tttaggtgtg acgctagaaa aattggacaa tcttatgcaa gctaacgctg tgacgcttga 4080 taagtatcac gcgtggttgt ctaagaagtc tccatcaact tggcaagact gtagaatgtt 4140 tgccgatgct ctgaaggttt ccatgtacgt taaggtttta tctgacaaac cttacgatct 4200 aacttatgag gttgatggtg ctggttcctc agtgacatta catttagttg gtaaggaaag 4260 cgatgggcat tttattgctg ccccgcttag tccgtcgctt tctaccaatg agagagagtc 4320 cggagatgat agtaagaaac cggctgatga ttctgacacc tttgatgctg ctaatttgtt 4380 tgctgataag ggtgtttctt ccgctgatat agaggctttt tgtgcctatt tagaaaagac 4440 tttaatggca acaattatgg agtatgattt gagattgcaa tcgtgggcta atgtggttga 4500 tgatactgac gatttttatc aaattaatat ttctgagttt cgtcagtcca cgtgttttgg 4560 taaattgttg tcagcgcttg aagttttgaa ggttgatgtt tcgaggaaga ggtttatatc 4620 tgattggttg tgtaaaaatc ttgagaataa acaattccgg tggcgttggt cttctagtgt 4680 ggcttcaact agttcggccg ggtcgaatgt cgacgatgat tttgtcaata tggcaggggg 4740 aaagactgat gctaatgttg atcctgctga tgttttgagg cagagtttta tggattatgc 4800 atcggaattt gttcctatcc ttatcgctga atcaccaata cttatgccgt tagttgagcc 4860 tgaaccgata ttgtccaagt gtatggtgcc tgagtttgac gcctttttat taataaagga 4920 atttgatttg gacaatggtg ctgatgagta tcaatgcgct tatcttaatg aatctgttgc 4980 taatcgtgtt ggtgacaaat ttgtttcggg tgttttagac actgatatta tatctccatt 5040 aaatctgagg ggacatccta ttgctgaaaa tgttaaatat cacagtatgt gtgtggcccc 5100 ggctcagata tattttaagc ggaatcagtg gcaagaatta caggttcaac aggctcggta 5160 cttatttcga aaagtgagaa attctccgtc atcgacacaa gatagtgttg cacgtatggt 5220 tgctcagcta tttgtttctg attgtttggt gccaaacgta gctgatactt tttctgcttc 5280 caatttgtgg cgaattatgg acaaagctat gcatgacatg gtcacaaaaa attatcaagg 5340 acaaatggaa gaggagttta cgcgtaatgc taaattatat cgttttcagt tgaaggatat 5400 tgaaaaacct ttgaaggacc cagagactga tttggcaaag gctggtcaag ggatattggc 5460 atggtctaag gaggcacatg ttaagtttat ggttgctttt agagttttaa atgatttgtt 5520 attgaagtcg ttaaactcta atgttgttta cgataacaca atgtctgaga ccgaatttgt 5580 tggaaaaata aatgccgcca tgaatatagt accggatagt gctataaacg gggttatcga 5640 tgctgctgct tgcgattctg ggcaaggggt ttttacccaa ttgatagaaa gacatattta 5700 tgctgctttg ggcatttctg acttcttttt ggattggtat ttctcatttc gtgagaaata 5760 tgttatgcag tccagatatg tcagagcaca tatgtcttat gttaagacta gtggagaacc 5820 cggcactttg cttggtaaca ccattttaat gggtgctatg ttaaatgcta tgcttcgtgg 5880 gaccggacca ttttgtatgg ccatgaaggg cgatgatggt tttaaaaggc aggctaattt 5940 gaaaattaac gatcaaatgt taaagttgat taaaaaggaa actgtcttgg atttcaaatt 6000 ggatttaaat gttcctatca ctttttgtgg ttatgcttta tctaatggac atttgtttcc 6060 aagtgtttca cgtaaattga cgaagatagc agcacacagg ttccgtgagt ataagcattt 6120 ttgtgaatac caggaatctt tgcgtgattg gattaaaaat cttcccaaag acccagctgt 6180 ttatgctgat tttttggagt gtaatgctag cttatcttgt cgcaatgttg acgatgttca 6240 acgttggttg gatgctatta tctctgtgtc tcgaattggg cgtgagcaat ttatgatgat 6300 gttcccgata cgggaagttt ttatgtcatt gccacccgtt gaggatagtt tgggtgagct 6360 atcttctacg aaagtggctg tgtctattgg ggacaatgtt tctaatgttg ttagaaaggt 6420 tgctcgtgtc gatatgaaaa agttttaatg tgtaatatag taatataata cgttgtatac 6480 ttgtgagtag tataagtttg aaaatgaata aaggccatgc cacaggcctc ctatcttgat 6540 gaaggttgtt gtggttttct cattactgtt ttattattgt ttgagttgct tatgttggtt 6600 cttgattatg tggtgcataa ttattgaact aattgtttgt tgggttgtaa tgtactgact 6660 gggtgtgaat tgtaccagtc gtta 6684 //