ID EU273817; SV 1; circular; genomic DNA; STD; VRL; 2844 BP. XX AC EU273817; XX DT 04-MAR-2008 (Rel. 95, Created) DT 07-MAY-2008 (Rel. 95, Last updated, Version 3) XX DE Beet curly top Iran virus-[Sh2], complete genome. XX KW . XX OS Beet curly top Iran virus-[Sh2] OC Viruses; Geminiviridae; Becurtovirus. XX RN [1] RP 1-2844 RX DOI; 10.1007/s11262-008-0224-2. RX PUBMED; 18401697. RA Yazdi H.R., Heydarnejad J., Massumi H.; RT "Genome characterization and genetic diversity of beet curly top Iran RT virus: a geminivirus with a novel nonanucleotide"; RL Virus Genes 36(3):539-545(2008). XX RN [2] RP 1-2844 RA Heydarnejad J., Bolok Yazdi H.R.; RT ; RL Submitted (10-NOV-2007) to the INSDC. RL Department of Plant Protection, Shahid Bahonar University of Kerman, Kerman RL 7616914111, Iran XX DR MD5; d57cd6f84a2d436cc6c447d1a9cf3d9a. DR EuropePMC; PMC4221606; 25119676. XX FH Key Location/Qualifiers FH FT source 1..2844 FT /organism="Beet curly top Iran virus-[Sh2]" FT /host="sugar beet" FT /isolate="Sh2" FT /mol_type="genomic DNA" FT /country="Iran:Shiraz" FT /db_xref="taxon:501372" FT gene 167..436 FT /gene="V3" FT CDS 167..436 FT /codon_start=1 FT /gene="V3" FT /product="movement protein" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/TrEMBL:B1P3D2" FT /protein_id="ACA35254.1" FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSVPEGSEEIAEA" FT gene 243..608 FT /gene="V2" FT CDS 243..608 FT /codon_start=1 FT /gene="V2" FT /product="ss-ds DNA regulator" FT /note="regulator of the relative levels of the ssDNA and FT dsDNA" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/TrEMBL:B1P3D3" FT /protein_id="ACA35255.1" FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSKSEEKVYGVDKLVEEEEVD FT RWEECFEEVPMEEAGCK" FT gene 487..1239 FT /gene="V1" FT CDS 487..1239 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="capsid protein" FT /db_xref="GOA:B1P3D4" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B1P3D4" FT /protein_id="ACA35256.1" FT /translation="MAVQSQKRKYMGSTSWSKKKKSTGGKSASKKYQWKKPVVSNRSLK FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKMDMALMASSG FT FWASPNYMTQYHWLIVDRDVGATFPNQLSNIFDIPPGGQAMPSTYRIRRDANERFIVKK FT KWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINVRNINVKTQWKDTGGGKYEDVKENA FT ILYVVVNDNTDNTNMYATLFGNCRAYFY" FT gene complement(1485..1790) FT /gene="C2" FT CDS complement(1485..1790) FT /codon_start=1 FT /gene="C2" FT /product="hypothetical Rep protein" FT /db_xref="UniProtKB/TrEMBL:B1P3D5" FT /protein_id="ACA35257.1" FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS" FT gene complement(1805..2713) FT /gene="C1" FT CDS complement(1805..2713) FT /codon_start=1 FT /gene="C1" FT /product="hypothetical RepA protein" FT /note="replication-associated protein" FT /db_xref="GOA:B1P3D6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1P3D6" FT /protein_id="ACA35258.1" FT /translation="MPRVPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEE FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLACSEDTNVLNLSRSQTTDQS FT DQEVSTYADHPEQERPSGQDL" XX SQ Sequence 2844 BP; 809 A; 485 C; 669 G; 881 T; 0 other; ccccgcgttt acctttccac gtggcgtatg cagagtgggc ggacggttga gtggggaaca 60 cgctttactt taaattaaag taaagtagca ctaagtggga cccacttttt tatttcttta 120 aagacttaat tattaagtct tctagatgcg tatattatac gtataaatga tggtgtgtat 180 tcccgactgg ttatttctac tcttcgtatt tagtacgatt cttcagtcgg gaattaattt 240 ctatggtacc tttcagagtg agcgaatttc cgcgaagcta tccagccttg ctagccgttt 300 cgacgagctg tttcttgcgt tacaacaagt ggtgtttgct cggaatcgag cctcaagttc 360 gcgagccgtt gactctagag gaaggcgagg actttcttca gttccagaag gaagtgaaga 420 aattgctgaa gcttaaggtt agttttaagc gtaagtgttg tttgtacgag gacatataca 480 agaagtatgg cggttcaaag tcagaagaga aagtatatgg ggtcgacaag ttggtcgaag 540 aagaagaagt cgaccggtgg gaagagtgct tcgaagaagt accaatggaa gaagccggtt 600 gtaagtaacc ggagtctgaa gttgaagatg tatgacgata tgctgggtgc atctggagta 660 gggtctacca tcagtaatga tggtatgatc actatgttga acaactatgt tcaaggtatt 720 ggtgatagtc aaaggtcaaa caatttgacc gttaccaggc acttgaagat ggatatggcg 780 cttatggcta gttctggctt ctgggcgagt cctaattata tgacacaata tcattggctt 840 attgttgacc gagatgttgg tgctacgttt ccgaatcagt tgagtaatat atttgatatt 900 cctcctggtg gtcaggctat gccttccacc tatcgtatta ggagggatgc gaatgaacgg 960 tttatcgtga agaaaaagtg gcagactcat ttgatgtcta cgggtactga ttatggtgga 1020 aaacagacgt ataaggcgcc ttctatgccc aattataaga aggctatgaa tattaatgtt 1080 aggaatatca atgtgaagac gcagtggaag gacactggtg gtggcaagta tgaagatgtg 1140 aaggagaatg ctattcttta cgtagtggtt aatgataata ctgataatac aaatatgtat 1200 gctactttgt ttggtaattg tagggcttat ttctattgat tattagaaat gcccaatgat 1260 gttgaagttg aataaaaaat ttattattaa atttgtttgt gtaagattga aatgtagata 1320 tgtaaatatc tagtataatt gccttggaaa acaaaaaacg aaaaaatgat tgccggaaaa 1380 cgaaaaaaaa acccctcaga aattagaccc ccggaaaagc aatattttta tattaatctg 1440 cagcccatcc acgaagtgga tgttacatat ttcgaagaaa taacttaact ataccaaact 1500 tcatcacttg ctaagtaata tacatcgcaa ttagcgtaaa accaatcttt catagattca 1560 ctcatacaag gtatccagtc catatctgga ttagtaatag caatacaagg tcttccgcct 1620 ggaatgacta agtttggttt atgttttatc caaacactat aatcttcgtt acatccgata 1680 atagatttaa acaactcctg ttgtattttt tgatagcgga tatcgtctat tatatggtat 1740 gtagtgtggt ctatatcgta tagagaccaa tctaatacca tgccagacat atagtggtgt 1800 cggcctagag atcttgccca ctgggtcttt cctgttctgg atggtccgca tatgtagaga 1860 cttcttggtc ggactggtct gttgtctggc tcctggacaa attaagtacg ttagtgtctt 1920 cactacatgc tagatcgcga ctaagtcgat ctaggtggaa gtattcttca agagtcattt 1980 gtctgtcttg aagaattgct cccctgcaat tctcacatat ttcgtaatgt aaacaatctg 2040 aacttacgaa atatatattt tgttccgccc actctttgat agtgtcaggt agcctagaga 2100 actccgtcca tctgggtgtg taaggttgca caactggcct gaaatgatag ttggcgaagg 2160 atagaatgga aggccatctg agaacgaaat ctgttgggca ggactctcgt atgttactga 2220 agaactcctc cttggtgttg gatgaatcaa gaattcgtct ccattccacg ttgctgttgc 2280 caatactgtt tggagagcgc cctcccagtc gaagctctcc aaatgttcta gggctcgtgt 2340 cctccttggt gatatactcg aatgctcgct ttggggcgtt gagtccgtcg attcttgggt 2400 gaatcgttcg accgtctggg agtatgatgt tgaaaaacag gttcccattg acgtcgagtt 2460 tcttgtcaca ctggataata cagtgtgtgt ggaatcctcc ttcaggttgt tcttcagtag 2520 gctgatgatg ttctagtgat actgcaagga atagaatcac atatgattct aataaggtct 2580 tcagtttctc gaatatataa tctttaaaat ccccccctat ttgggaatat gttagaaaag 2640 catttttctt ttgaaatcgt aaataaccgg gttggttagg ggtaggtctg tttctgtttg 2700 gaacacgtgg catgtttgtt tttgtttccc tcttccgtac gatgaatgaa aagaaattgt 2760 atatatgaga ggaagaggaa cttaagagga atgaggaact gaagagggag gaagagcgat 2820 aaataggtaa acgcggataa gatt 2844 //