Dbfetch
ID EU262627; SV 1; linear; genomic RNA; STD; VRL; 1360 BP. XX AC EU262627; XX DT 02-SEP-2009 (Rel. 102, Created) DT 02-SEP-2009 (Rel. 102, Last updated, Version 1) XX DE Cucurbit aphid-borne yellows virus clone pM061016-1 RdRp (RdRp) and coat DE protein (CP) genes, partial cds. XX KW . XX OS Cucurbit aphid-borne yellows virus OC Viruses; Riboviria; Luteoviridae; Polerovirus. XX RN [1] RP 1-1360 RA Shang Q., Xiang H., Han C., Li D., Yu J.; RT "Distribution and molecular diversity of the poleroviruses infecting RT cucurbits in China"; RL Unpublished. XX RN [2] RP 1-1360 RA Han C.; RT ; RL Submitted (04-NOV-2007) to the INSDC. RL Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West RL Road, Haidian District, Beijing 100094, China XX DR MD5; 874b03cd06e3f314bd19336bd544c061. XX FH Key Location/Qualifiers FH FT source 1..1360 FT /organism="Cucurbit aphid-borne yellows virus" FT /host="squash" FT /isolate="Inner Mongolia" FT /mol_type="genomic RNA" FT /country="China" FT /clone="pM061016-1" FT /db_xref="taxon:91753" FT gene <1..576 FT /gene="RdRp" FT CDS <1..576 FT /codon_start=1 FT /gene="RdRp" FT /product="RdRp" FT /db_xref="GOA:C7S734" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:C7S734" FT /protein_id="ABY84811.1" FT /translation="SVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLYCISNSVLCLSD FT GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKS FT LGFKVEESSKLEFCSHIFEREDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFS FT ILNELRSDPSLVETLHQWLVLPVQPQKI" FT misc_feature 577..775 FT /note="intergenic NCR" FT gene 776..>1360 FT /gene="CP" FT CDS 776..>1360 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:C7S735" FT /db_xref="InterPro:IPR001517" FT /db_xref="UniProtKB/TrEMBL:C7S735" FT /protein_id="ABY84812.1" FT /translation="MNTAAARNQNAGRRRRRNQRSIRRDRVVVVNPSGGPPRRRRQRRN FT RRRPNRGGRAGGRSPGETFVFSKDNLTGSSTGSITFGPSLSESPAFSSGILKAYHEYKI FT IMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTINKFGITKNGLRRWAARQINGMEW FT HDATEDQFKILYKGNGSSSVAGSFRITIKCQV" XX SQ Sequence 1360 BP; 369 A; 339 C; 338 G; 314 T; 0 other; agcgtttcgg actggcttct tgaagatgat atggaagtcc gaaaccgcct aacgctagat 60 ttaaacgaaa ccacgcgccg tttacgagca gcatggttat attgcatatc taacagcgtc 120 ctctgccttt ctgacggaac attattagcg cagagagtcc caggcgtgca gaaaagcggc 180 agctacaata cgtcatcgag caattcccgt attcgggtga tggctgccta ccactgcggc 240 gcagaatggg caatggcgat gggcgatgat gccctagagt cagcctgctc gaacctcgag 300 cgttacaaat cgctcggttt caaagtcgag gagtcctcaa aactggaatt ctgttctcac 360 atttttgaga gagaggacct cgccattccg gtcaacaaag ccaaaatgct ttataagctt 420 atacatgggt atgagccgga atgtggcaat gtggaagtgc tgattaatta tttggccgcc 480 tgtttctcaa ttctaaatga gttgcggtcc gacccttccc ttgtcgaaac tctccaccag 540 tggctggtcc ttccagtgca gccacaaaag atataagggg agtataaaga acactagcca 600 agcacacacg agttgcaagc attggaagta ttagtctcgt tactaagagt ccacacaata 660 gattacaaat ttctcgcagg attttctagc ggtctattgt ctgcagtacc agttacggtg 720 ataggactct attttgtcta cctaaagatt tcagcacacg tgcgatcaat tgttaatgaa 780 tacggccgcg gctagaaatc aaaatgcagg gaggcggagg cgaagaaatc agcgctctat 840 acggcgcgac cgcgtggttg tggtcaaccc ctctggggga ccaccacgca gaagacgaca 900 acgaagaaac cgccgacgcc ctaatcgagg aggcagagct ggaggaagga gcccaggcga 960 aacattcgta ttttcaaagg acaatctcac gggcagttcc acaggaagta tcactttcgg 1020 gccgtctcta tcagagagcc cagcattcag ctctggaata ctcaaggcct accatgaata 1080 taagatcatc atggtccagt tggagttcat ctccgaggcc tcttccacct cctcgggttc 1140 catctcttat gagttggacc cccactgcaa gcttagctcc ctccaatcca cgattaataa 1200 gtttggaatc accaagaatg gattgcgacg ttgggcagct aggcagatca acgggatgga 1260 atggcatgac gcaactgagg accaattcaa gatcctctac aaagggaacg gatcttcctc 1320 ggttgcaggc agcttcagga tcaccatcaa gtgccaggtc 1360 //