ID   EU259784; SV 1; linear; genomic RNA; STD; VRL; 1366 BP.
XX
AC   EU259784;
XX
DT   02-SEP-2009 (Rel. 102, Created)
DT   02-SEP-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Cucurbit aphid-borne yellows virus clone pM070928-2 polymerase (RdRp) and
DE   coat protein (CP) genes, partial cds.
XX
KW   .
XX
OS   Cucurbit aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1366
RA   Shang Q., Xiang H., Han C., Li D., Yu J.;
RT   "Distribution and molecular diversity of the poleroviruses infecting
RT   cucurbits in China";
RL   Unpublished.
XX
RN   [2]
RP   1-1366
RA   Han C.;
RT   ;
RL   Submitted (02-NOV-2007) to the INSDC.
RL   Plant Pathology, China Agricultural University, No. 2 Yuanmingyuan West
RL   Road, Haidian District, Beijing 100094, China
XX
DR   MD5; 5f17baa2c9975519ff9fb83eaeefcba8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1366
FT                   /organism="Cucurbit aphid-borne yellows virus"
FT                   /host="suakwa"
FT                   /isolate="Guangdong"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /clone="pM070928-2"
FT                   /db_xref="taxon:91753"
FT   gene            <1..579
FT                   /gene="RdRp"
FT   CDS             <1..579
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="polymerase"
FT                   /db_xref="GOA:C7S722"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:C7S722"
FT                   /protein_id="ABY84520.1"
FT                   /translation="SVSSWMLEDDMEVRNNLTINNNELTRRLRACWLKRISNSVICLSD
FT                   GTLLAQEFPGIQKSGSYNTSSTNSRVRVMLSIYAGASWAIAMGDDALESADTIIPLYEQ
FT                   YGLKVEVSDKLEFCSHEFKSSSLAIPTNIGKMLYKLIHGYEIFPGMSSIQVTINYLTAC
FT                   YSVLNELRHVPEAASLVAQCLAPVEAQKV"
FT   misc_feature    580..778
FT                   /note="intergenic NCR"
FT   gene            779..>1366
FT                   /gene="CP"
FT   CDS             779..>1366
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C7S723"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C7S723"
FT                   /protein_id="ABY84521.1"
FT                   /translation="MNTVVVRNRNGKGRRRRNSRRNAKGNRVVVVQAPGAPQRGRRRRR
FT                   NGRRPSRGGRARGTSQGETFVFSKDNLTGSSSGAITFGPSLSDSPAFSSGILKAYHEYK
FT                   ISMVKLEFISEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKSGSRTWSAKFINGME
FT                   WHDATEDQFRILYKGNGSSSTAGSFRITIRCQV"
XX
SQ   Sequence 1366 BP; 374 A; 346 C; 326 G; 320 T; 0 other;
     agcgtctcat cgtggatgct cgaggatgat atggaggtta ggaacaacct caccatcaat        60
     aacaacgagc tcaccaggcg ccttcgcgca tgctggttga agcgcatatc gaactctgtg       120
     atatgcctgt ccgatgggac tttgctagcc caggagttcc ccggtataca gaaatcgggc       180
     tcctacaaca ccagctccac caactcaaga gtgagggtga tgctctccat ttatgctggt       240
     gcatcctggg ccatagctat gggcgatgac gcccttgagt ccgctgatac gataatccca       300
     ttatatgagc aatacggact caaagtcgag gtctctgaca aactggaatt ttgttctcat       360
     gagttcaaaa gttcgagcct cgccatcccc acgaatatag ggaaaatgct ttacaagctc       420
     atacatggat atgagatctt cccggggatg tccagcattc aggtcactat caattatttg       480
     actgcctgtt actcagttct aaatgaactg cgtcatgtgc ctgaagctgc ttcactagtc       540
     gcgcagtgcc tcgctccagt cgaggcacaa aaagtttaaa tagaagcgcg cacacagaac       600
     cagccggaaa tacgttgttg caattgccgg aggttttcag ccaactacat cataggccaa       660
     ccagatttca agtttttagc aggatttact tcgggcttcc tgatagctgt accaatttca       720
     gcacttggcc tatatttgat ctacctaaag atttctaaac acgtgcaatc gatagttaat       780
     gaatacggtc gtggttagaa atcgaaatgg caagggaaga aggagaagga atagccggcg       840
     caatgcaaaa ggcaaccgcg tggttgtggt ccaagcccct ggggctccac agcgcggaag       900
     acgacgacga cgaaacggtc gacgcccttc tcgaggaggc agagctagag gaacaagcca       960
     aggcgaaaca ttcgtattca gcaaagacaa tctcacgggc agttcctctg gagcaatcac      1020
     tttcgggccg tctttatcag acagcccagc attcagctct ggaatactca aggcctacca      1080
     tgagtataaa atctcaatgg ttaagttgga gttcatctcc gaggcctctt ccacgtcctc      1140
     cggttccatc tcttatgagt tggaccccca ttgcaaactt agctccctcc aatccacggt      1200
     taacaaattc ggtatcacaa agagtggatc acgaacatgg agcgctaagt tcattaacgg      1260
     gatggaatgg cacgacgcca cagaggatca gttccgaatc ctttacaaag gaaacgggag      1320
     ttcctcaacg gcgggctctt ttagaatcac catcaggtgc caagtc                     1366
//