ID EU257627; SV 1; linear; viral cRNA; STD; VRL; 4818 BP. XX AC EU257627; XX DT 01-JAN-2009 (Rel. 98, Created) DT 03-FEB-2009 (Rel. 99, Last updated, Version 3) XX DE Kupe virus isolate K611 segment M, complete sequence. XX KW . XX OS Kupe virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Nairoviridae; Orthonairovirus. XX RN [1] RP 1-4818 RX DOI; 10.3201/eid1502.080851. RX PUBMED; 19193256. RA Crabtree M.B., Sang R., Miller B.R.; RT "Kupe virus, a new virus in the family bunyaviridae, genus nairovirus, RT kenya"; RL Emerg. Infect. Dis. 15(2):147-154(2009). XX RN [2] RP 1-4818 RA Crabtree M.B., Sang R., Miller B.R.; RT ; RL Submitted (31-OCT-2007) to the INSDC. RL DVBID, CDC, 3150 Rampart Rd., Fort Collins, CO 80521, USA XX DR MD5; 83155aaa75624a0b642d9c7a8aa9e75e. DR EuropePMC; PMC2657624; 19193256. XX FH Key Location/Qualifiers FH FT source 1..4818 FT /organism="Kupe virus" FT /segment="M" FT /host="Amblyomma gemma (tick)" FT /isolate="K611" FT /mol_type="viral cRNA" FT /country="Kenya" FT /collection_date="1999" FT /db_xref="taxon:498356" FT CDS 48..4697 FT /codon_start=1 FT /product="glycoprotein" FT /db_xref="GOA:B8PWH4" FT /db_xref="InterPro:IPR012487" FT /db_xref="UniProtKB/TrEMBL:B8PWH4" FT /protein_id="ABY82501.1" FT /translation="MRVILLLCMLSVAFANSTASSSSTAVSTYSTITTDTSTTDASTAE FT SPTTPHTSPSTNTEGTTSTEPHTTKQLSTRTSTRSTSTSQRVWKEVAMHGEILSRNVRS FT SSYKDALNARILSLMDVGLGDPDKHLDNICSNRKVNCSVEALRSRLAEFFSDTHANACY FT NEVLERHLCDVNPQVSQRPSKVLGIDDTVLLRELDRRILRFFSDTARMTCLSASLLKPD FT SFVDWHEPRVIPINGPKQLPVHNVHCLNIELESQNDGNLIIVHVSLSSVDVVLKDCKAT FT INLRQCLYMHTGTGKIRVPKFIKQDRETSGKSNKLGIGVYTITLDLLDTANLNCRLTTQ FT CIVKGKELKKGQSEMKGYTTELVFPRASPLKRRILAVNEPSANCNSGTHLSDSKSIEVH FT GDHNGGPGQKITFCNGSLVLDVQLGSREGCYTVNKVTTKRVCKPRTSVAACKIEKELKN FT CDSGKCLQISQEGLGKIKVARGSTIVITDCRKQCLIPIPADTGDILVDCSGGKQHFLES FT NIVDVHCPKARYFNGIMLYFCRMSHRPIVAVTFGLWLGCGYVVTCIASFILYYLIFFLA FT NAVKKCRQRREKPGALCLKCEQKTLNIYDQELHDLNCSFNLCPYCCNRMSDEGIVRHVG FT KCPKREERLFEIETYMNYIRVPVFFRCLLSISIGVGTFLKRATWLAILIILFCITIAPV FT QGQQLNEMANIGGQDYSICFFLFGCLVASAALLKLRRVNSGSVIEVIDCFGRCSFCGEF FT TDCLFEEIVHDTLCNLCVCPYCEGQSLDITTLRIHVGDCYKTNTRKQIYKILGRKFTQS FT LVAREGLFTTKLQIIFNKTNTILFIFAICFLILFTAHPVHGFDSGNLPKGVWEDSEDLI FT AFCTQTCFIEEDECICPEINPNARRLLFFNGLQNAIRRSTESKKLMTSLSIDTPWGAIN FT VESTYKPTLATSNIGMSWSSADIRGDKVILSGKSSSIIKLNAKTGIMWELGSELASEKK FT NLLISIMDYTQSYNAAFEYITGDRTLSEWPKAVCTGDCPHKCGCTTTTCMFKEWPHTRN FT WRCNPTWCWGIGTGCTCCGMDVEKPFNRFFAVKWSLEYIKTEALMCIEVTNEERHCEIV FT EAGTRFTIGPVTATISDTQNIVNKLPTEIMTIQKLDDSRFVDIMHVSNVISAENSCKLQ FT SCTHGSAGDIQIYHTDNLIKNDHSSGINLAAIDPLVNTSWLSWEGCDMDYFCNVGDWPT FT CTYTGVVTQNTESFENLLNIEKDYTKRFFFHTKRIMANSGTLQMDLKARPNEGGGEVTV FT LVEVENMELHSKTIKLAGIKISNLKCSGCYSCTSGILCSLVARIDNPDEFIIHLRSKDP FT DVVVADTGIVARKGISNSAGKIRVFSVAEKKKLCFEVVEGSYCKDCSRDQLNVCTDVNL FT EPPKDILLEHRGTIVQHKNDTCSSGIDCWSKSISSFASGVGIFFTRYFGSVVLGLLGTL FT LPFILVIIFFIWGDKLLKPCSIFFRCCRQRHHQHKYSSLSEEEELRDIVRKFNKSGELL FT EKGENDKRTIARLFMADVKGKGKKLKELA" XX SQ Sequence 4818 BP; 1505 A; 944 C; 1071 G; 1298 T; 0 other; tctcaaagac agacctgcgg cacatgcaag tgttaaagga agtcagaatg agagtaatct 60 tgctactctg catgctgagt gtggcatttg ccaacagtac agcaagcagt agtagcactg 120 ccgtctcgac atacagtacc atcaccacag atacaagtac aactgatgca tctacagccg 180 agagtccaac cacaccacac acaagcccca gcacgaacac cgaaggcaca accagcaccg 240 agcctcacac caccaaacaa cttagcacca gaacaagcac cagaagcaca tcaacatcac 300 agagagtgtg gaaagaggtt gcaatgcatg gtgagattct cagtagaaat gtgaggtcaa 360 gttcttataa ggatgcacta aatgctagaa tcttaagcct gatggatgtt ggattaggtg 420 atccagacaa acatcttgat aacatctgca gtaacaggaa agttaattgt tcagtggaag 480 ctctgagatc aaggttggct gaatttttct ctgacactca tgcgaatgcc tgctacaatg 540 aggttctcga aaggcatttg tgtgatgtta atccacaggt cagtcagaga ccctcaaagg 600 tcctgggtat tgatgacact gtcctactaa gagagctaga caggaggata cttaggttct 660 tttctgacac tgccagaatg acttgtttat cagcctccct tttaaaacct gactcttttg 720 tggattggca tgaaccaaga gttattccta ttaatggacc aaaacaatta ccagttcaca 780 atgttcactg tctgaatatt gaacttgagt cacagaatga tggaaatctg ataattgtgc 840 atgtgtcact cagtagtgtt gatgtggtac tcaaggactg caaagcaaca ataaacctga 900 ggcagtgttt atatatgcac acgggtacag gaaaaataag ggttcccaaa ttcatcaagc 960 aagacagaga aacttctgga aaatccaaca aacttgggat aggtgtttac acaatcactc 1020 ttgacctctt ggacactgcc aacctgaact gtaggttaac aacacagtgc atagtaaaag 1080 gtaaggagct taagaagggc caaagtgaga tgaaaggtta tacaacagaa ctagtgttcc 1140 caagagcatc tcctttaaaa agaaggatac ttgcagtcaa tgaaccatca gcaaactgca 1200 actctggaac gcatctgtct gattcaaagt ctattgaggt gcatggtgac cacaatggag 1260 gtccaggaca gaagataaca ttctgtaatg gctccttagt gttggatgta cagcttggct 1320 ctagagaggg ttgctatact gtaaataaag tcacaactaa aagggtgtgt aagcccagaa 1380 catcagttgc agcctgtaaa attgaaaagg agctaaagaa ctgtgattca ggaaagtgtc 1440 tacaaatatc tcaagaaggg ctagggaaaa tcaaagttgc tcgaggttca actatagtta 1500 ttacggactg tcgaaagcag tgtttgattc caattccggc ggatacaggt gatattttag 1560 ttgactgttc aggagggaaa cagcacttcc tagaaagcaa tattgttgat gttcactgcc 1620 caaaggccag atactttaat ggaattatgc tgtatttttg ccgtatgtct cacagaccta 1680 ttgtggctgt aacctttggc ttatggcttg gatgtggtta cgtcgtaact tgcattgctt 1740 cctttatctt atactaccta atcttttttt tggctaatgc agtaaaaaaa tgtcgacaaa 1800 ggagagagaa accaggagcg ctgtgtttga aatgtgagca aaaaacactc aatatctacg 1860 accaggagct tcacgaccta aattgctctt ttaatctgtg tccttactgt tgcaatagga 1920 tgtcagatga gggtatagtg agacatgttg gcaagtgtcc taaaagagaa gagaggctgt 1980 ttgaaattga aacttacatg aattacatta gggtgccagt tttttttaga tgtcttctct 2040 ccatatctat tggtgttggc acttttctta aaagagcaac ttggttagca atccttataa 2100 ttcttttttg tatcacaatt gcacctgtcc agggccagca gctcaatgaa atggcgaaca 2160 ttggaggtca ggattacagt atttgcttct tcctgtttgg ctgtttggta gcatcagctg 2220 ccctgctgaa gctcagaaga gtgaacagtg gatcggttat tgaagtcatc gattgttttg 2280 gaaggtgtag cttttgtggt gaatttacag attgtttgtt tgaggaaatt gtccatgaca 2340 ctctatgcaa tctctgcgtg tgcccttact gcgaaggtca atcccttgac atcaccaccc 2400 tccggataca tgtaggagac tgctacaaga caaatacaag aaagcagatc tacaagatac 2460 ttggaagaaa gttcactcag tctctagtag ctagggaagg gctcttcaca acaaagcttc 2520 agatcatttt caacaagaca aatactatct tgttcatctt tgcaatctgc ttcttaattc 2580 ttttcacagc tcaccctgtg catggatttg attccgggaa cttgcccaaa ggagtatggg 2640 aggactccga agatttaatt gcattctgca ctcaaacctg cttcatagag gaagatgaat 2700 gcatctgccc tgagatcaac cccaatgcaa gaaggcttct tttttttaat ggtttacaga 2760 atgccataag aaggtcaaca gaatccaaga agttgatgac cagcctctca attgacacac 2820 catggggtgc aattaatgtg gagtcgactt acaagccaac cctagcaact tcaaatatcg 2880 ggatgagctg gagctcagct gacataagag gcgataaagt cattctgtca ggaaagagtt 2940 catcgatcat aaagttaaat gcaaaaacag gcattatgtg ggaattaggc tctgaattgg 3000 cttcggaaaa gaagaacctc cttatttcta taatggatta cacacagtct tacaatgcag 3060 cttttgagta catcacaggt gacagaacac taagtgaatg gcccaaagca gtgtgtactg 3120 gcgattgtcc tcacaagtgc ggctgcacaa ccacaacatg tatgtttaaa gagtggcctc 3180 acacacgcaa ctggaggtgc aacccaactt ggtgttgggg tattggaaca ggttgcacct 3240 gttgcggtat ggacgttgaa aagccattta acaggttctt tgcagtaaag tggtccttag 3300 aatacataaa aactgaggca cttatgtgta tagaagtaac caacgaagaa agacactgtg 3360 agatagtaga ggctggtacc aggttcacaa ttggtccagt aaccgcaaca atttcagaca 3420 ctcaaaatat agtcaacaag ctacctacag agataatgac aatacaaaaa cttgatgact 3480 ccagatttgt agacataatg catgttagta atgtaatctc tgcagagaac agctgtaagt 3540 tacagagctg cactcatggc agtgctgggg acatacaaat ctaccacact gacaatctaa 3600 taaaaaacga ccatagcagt ggaattaacc tggctgcaat tgatccactt gttaatacta 3660 gctggctttc ctgggaaggt tgtgatatgg actacttctg taatgttggt gactggccga 3720 cctgcacata cacaggagtt gtaactcaaa atacagagag ctttgagaac cttttaaaca 3780 tagaaaagga ctatactaaa aggttcttct tccacaccaa gaggatcatg gccaattcag 3840 gtactctgca gatggatctc aaagctaggc ccaatgaagg tggaggagaa gtgacagtat 3900 tagttgaggt cgaaaatatg gagttgcact ctaagacaat taaacttgct ggtataaaga 3960 taagcaacct caaatgttct ggttgttata gctgtacttc aggcatcttg tgtagccttg 4020 ttgctagaat agacaatcca gatgaattca ttatacactt aagaagcaag gacccagatg 4080 ttgtggttgc tgacactggt atagtagcaa gaaaggggat atccaactct gctggaaaaa 4140 tacgggtctt ttctgtagca gaaaagaaga aactttgttt tgaagtggtt gaggggtctt 4200 actgcaagga ttgcagtcga gatcagttga atgtctgcac tgatgttaac ctggaaccac 4260 ctaaagatat acttctagaa cataggggga ctatagtgca gcataagaat gatacttgtt 4320 cttcgggaat agactgttgg agtaagtcta taagcagctt tgcttcaggt gtaggcattt 4380 tttttacccg atactttgga agtgtagttc taggactgct tgggacactg cttcctttta 4440 tactcgtaat catctttttc atctggggtg acaagctact aaaaccttgt tcaatattct 4500 tcaggtgttg ccgacaaagg caccatcagc ataagtattc cagcctgtca gaggaagaag 4560 aactcagaga tatagtgcgt aagttcaaca aaagtggaga gctccttgaa aaaggggaaa 4620 atgataaacg cactatagct aggttgttca tggccgatgt aaaagggaaa ggcaaaaagc 4680 taaaagaact agcttaaatc accacagtcc ataacttcat tgactaatta gagatattga 4740 tctaaacatt tattctttgc gcttctgcac taacccactt tattaacatc ttgctgtgcc 4800 gccacgctat ctttgaga 4818 //