Dbfetch
ID EU244327; SV 1; linear; genomic RNA; STD; VRL; 1360 BP. XX AC EU244327; XX DT 01-JAN-2009 (Rel. 98, Created) DT 29-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Cucurbit aphid-borne yellows virus pM071015-3 RdRp (RdRp) and coat protein DE (CP) genes, partial cds. XX KW . XX OS Cucurbit aphid-borne yellows virus OC Viruses; Riboviria; Luteoviridae; Polerovirus. XX RN [1] RP 1-1360 RX DOI; 10.1016/j.virusres.2009.07.017. RX PUBMED; 19664664. RA Shang Q.X., Xiang H.Y., Han C.G., Li D.W., Yu J.L.; RT "Distribution and molecular diversity of three cucurbit-infecting RT poleroviruses in China"; RL Virus Res. 145(2):341-346(2009). XX RN [2] RP 1-1360 RA Shang Q., Xiang H., Han C., Li D., Yu J., Yang D., Yang C.; RT "Distribution and molecular diversity of two distinct poleroviruses RT infecting cucurbits in China"; RL Unpublished. XX RN [3] RP 1-1360 RA Han C.; RT ; RL Submitted (24-OCT-2007) to the INSDC. RL Plant Pathology, China Agricultural University, No. 2 Yuanmingyuan West RL Road, Haidian District, Beijing 100094, China XX DR MD5; f69a156072003af4b886fc086300a477. XX FH Key Location/Qualifiers FH FT source 1..1360 FT /organism="Cucurbit aphid-borne yellows virus" FT /host="cucumber" FT /isolate="Guangxi" FT /mol_type="genomic RNA" FT /country="China" FT /clone="pM071015-3" FT /db_xref="taxon:91753" FT gene <1..576 FT /gene="RdRp" FT CDS <1..576 FT /codon_start=1 FT /gene="RdRp" FT /product="RdRp" FT /db_xref="GOA:B8PW11" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:B8PW11" FT /protein_id="ABY75289.1" FT /translation="SVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLYCISNSVLCLSD FT GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYYCGAEWAMAMGDDALESACSNLERYKS FT LGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFS FT ILNELRSDPSLVETLHQWLVLPVQPQKI" FT gene 776..>1360 FT /gene="CP" FT CDS 776..>1360 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B8PW12" FT /db_xref="InterPro:IPR001517" FT /db_xref="UniProtKB/TrEMBL:B8PW12" FT /protein_id="ABY75290.1" FT /translation="MNTVVVRNQNAGRRRRRNQRSTRRDRVVVVNPSGGPPRGRRQRRN FT RRRPNRGGRARGRNPGETFVFSKDNLTGSSSGSITFGPSLSESPAFSSGILKAYHEYKI FT IMVQLEFVSEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKNGLRRWTAKQINGMEW FT HDATEDQFKILYKGNGSSSVAGSFRITIKCQV" XX SQ Sequence 1360 BP; 370 A; 337 C; 334 G; 319 T; 0 other; agcgtttcgg actggcttct tgaagatgac atggaagtcc gaaaccgcct gacgctagat 60 ctaaacgaaa ccacgcgccg tttacgagca gcgtggttat attgcatatc gaacagcgtc 120 ctctgccttt ctgacggaac attattagcg cagagagtcc caggcgtgca gaaaagcggc 180 agctacaata cgtcatcgag caattcccga atccgggtga tggctgccta ctactgcggc 240 gctgaatggg caatggcgat gggtgatgat gccctagagt cagcttgctc gaacctcgag 300 cgttacaaat cgctcggttt taaagtcgag gaatcctcaa aactggaatt ctgttctcac 360 atttttgaga aagaggacct cgccattccg gtcaacaagg ccaaaatgct ttacaagctt 420 atacatggct atgaaccgga atgtggcaat gtggaagtgc tgattaacta tttggccgca 480 tgcttttcaa ttcttaatga attgcggtct gatccttccc ttgtcgaaac tctccaccag 540 tggctggttc ttccagtgca gccacaaaag atataagggg agtataaaga acactagcca 600 agcacacacg agttgcaagc attggaagtc tgagtctcgt taccaagagt ccacacaata 660 gattataaat ttctcgcagg attttctagc ggtctattgt tagcaatacc tgtcacggta 720 attggactct attttgtcta cctaaagatt tcagcccacg tgcgatcaat tgttaatgaa 780 tacggtcgtg gttagaaatc aaaatgcagg gaggcggagg cgaagaaatc agcgctctac 840 acggcgcgac cgcgtggttg tggtcaaccc ctctggggga ccaccgcgcg gaagacgaca 900 acgaagaaac cgccgacgcc ctaatagagg aggcagagct agaggaagga acccaggcga 960 aacatttgta ttttcaaagg acaatctcac gggcagttcc tcaggaagta tcaccttcgg 1020 gccgtctctt tcagagagcc cagcattcag ctctggaata ctcaaggcct accatgaata 1080 taaaatcatc atggtccagc tggagttcgt ctccgaggcc tcttccacct cctcgggttc 1140 catctcttat gagttggacc cccactgcaa gcttagctcc ctccaatcca cggttaataa 1200 gtttggaatc accaagaacg gattgcgacg ttggacagct aagcaaatca acgggatgga 1260 atggcatgac gcaactgaag accaattcaa gatcctctac aaggggaacg gatcttcctc 1320 agttgcgggc agtttcagga tcaccatcaa gtgccaggtc 1360 //