ID EU224265; SV 1; linear; genomic DNA; STD; VRL; 2707 BP. XX AC EU224265; XX DT 15-FEB-2008 (Rel. 94, Created) DT 01-MAR-2008 (Rel. 95, Last updated, Version 2) XX DE Panicum streak virus isolate PanSV-D[NIfo], complete genome. XX KW . XX OS Panicum streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2707 RX DOI; 10.1007/s00705-007-0020-7. RX PUBMED; 18172570. RA Varsani A., Oluwafemi S., Windram O.P., Shepherd D.N., Monjane A.L., RA Owor B.E., Rybicki E.P., Lefeuvre P., Martin D.P.; RT "Panicum streak virus diversity is similar to that observed for maize RT streak virus"; RL Arch. Virol. 153(3):601-604(2008). XX RN [2] RP 1-2707 RA Varsani A., Oluwafemi S., Shepherd D., Monjane A., Owor B., Windram O., RA Rybicki E., Lefeuvre P., Martin D.; RT ; RL Submitted (17-OCT-2007) to the INSDC. RL Electron Microscope Unit, Dept. of Molecular and Cell Biology, University RL of Cape Town, University Ave, Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 97b4b1cfc663ab9a13651bfbef687583. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2707 FT /organism="Panicum streak virus" FT /host="Urochloa maxima" FT /isolate="PanSV-D[NIfo]" FT /mol_type="genomic DNA" FT /country="Nigeria:Ifon Town" FT /lat_lon="6.9 N 5.78 E" FT /collection_date="Jan-2007" FT /db_xref="taxon:10826" FT CDS 145..471 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B0Z3W6" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B0Z3W6" FT /protein_id="ABZ79688.1" FT /translation="MEASSQYSSLPYPQPPRVPAAAPSAGGLPWSRVGEIAIFTFVAVL FT ALYLLWLWVLRDLILLVKAQRGRSTEELIFGPGERPAVAPADGSRPVPDPSPSCPPGPR FT PFVA" FT CDS 482..1225 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B0Z3W7" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B0Z3W7" FT /protein_id="ABZ79689.1" FT /translation="MSGALKRKRSDEVAWSRRKPAKKPARQPPPRAGPSVRRGLPALQI FT QTLVAAGDTMITVPSGGICSLLGTYARGSDEGNRHTNETLTYKVALDYHFVATAAACKY FT SSIGVGVCWLVYDAQPSGNAPEVKDIFPHGDTLSAFPYTWKVGREVCHRFVVKRRWTFT FT METDGRIGSDVPPANASWPPCKRSIYFHKFCTGLGVKTEWKNVTDGKVGAIKKGALYIV FT LAPGNGLEFTVHGQARLYFKSVGNQ" FT CDS complement(1593..2564) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B0Z3W8" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0Z3W8" FT /protein_id="ABZ79690.1" FT /translation="MSTVGSSSESRHSVRCFRHRNANTFLTYSKCPLEPEFIGEHLFRL FT TKDFEPAYILVVRETHTDGTWHCHALLQCIKPVTTRDERYFDIDRYHPNIQSAKSTDKV FT RDYILKDPKDKWEKGTYIPRKKSFVPPGKENSEKKPSKDEVMREIMTHATSKEEYLSLV FT QTSLPYDWATKLSYFEYSASRLFPDIAESYTNPHPATELDLHCNETIRDWLEPNIYQVS FT PKAYMLLEPSCLSLEQAKADLEWLAETTRMLQEQENAASTSSAQHGQVKQPGPEASEDT FT TTGKTILTGLHMMKKLSTMSLTTFPSSSVRAGSSSSAAKQTT" XX SQ Sequence 2707 BP; 529 A; 718 C; 736 G; 724 T; 0 other; accgctcaca ccccatgcga gccacggccc tgtgtggcga gcggtcctgc tctgccaggc 60 tgccggtgcg atttctttag ctgcgccgtc tttagcagct gcccacactg tcctataagt 120 tgctctccgg agtgcgatgc gctcatggag gctagcagcc agtactcgtc cttgccctat 180 cctcagccgc cacgggtacc cgccgcagct ccttctgccg gaggcctgcc gtggagtcgc 240 gtcggtgaga tagctatctt tacctttgtt gcagtcctag ctctttactt gctttggctt 300 tgggtcctca gagatcttat cttgcttgtt aaggctcagc gaggacgatc caccgaggag 360 ctgatctttg gtcctggtga gaggccagcc gtcgcccctg ccgacggttc tcgtcctgtt 420 ccggatccgt ctccgtcctg tccgccgggt cctaggccat ttgtggccta gagctctcag 480 catgtccgga gcgttgaagc gcaagcgttc tgatgaggtg gcctggagtc gaaggaagcc 540 agccaagaag ccagcccgtc agcccccacc ccgggctggc ccgtccgtca ggaggggact 600 ccctgccctc cagattcaga ccttggtggc tgccggtgat actatgatca ctgtgccgtc 660 aggcggcatc tgcagtctgc ttggcaccta tgcccgcgga tctgatgaag gaaaccgcca 720 caccaacgag actctaacgt acaaggttgc gttagactac cactttgttg ccaccgctgc 780 tgcgtgtaaa tacagcagta ttggtgttgg agtgtgctgg ttggtgtacg atgcgcagcc 840 ttccggcaat gccccggagg tgaaggatat cttccctcat ggagatacgc tttccgcctt 900 cccctacact tggaaggttg ggagggaggt ctgccatcgc ttcgtggtga agcgacgctg 960 gacgtttacc atggagaccg acggtcgcat tgggtcggat gtccctccgg ctaatgcctc 1020 ttggccgcca tgcaagcgct ccatctactt ccacaagttc tgcactggac tcggagtgaa 1080 gacggagtgg aagaacgtta cagacgggaa ggtcggcgcc attaagaagg gcgccttgta 1140 cattgttctt gccccgggca acggccttga gtttacggtt cacggccaag cccgtttgta 1200 ctttaagtct gttgggaatc agtgattccc acttaattta ataaaacttg ttttattcat 1260 actgaacgaa gttcatacat tacatagtcg gcagatttgc cgacgaaaaa cacacacata 1320 gtgcagcctc gggctaaaga ccgagtctca aacgacccaa cttaaaaaca aatcaaaaca 1380 agcatgatat tattaaaatt gcagccgccg gcttcactct gtctggaaga acttctctcc 1440 agacagcagg atgtactggt cgcagtttgc ctcgaagtag ctcagctgcg ccggagtcat 1500 gtccctcagc cagtcctcat cctcgttggc gaggatgatg gttggaatgc tcttctttgc 1560 taccttccgg cgtttcccgt acttgggatt gactatgtag tctgtttggc agccgacgag 1620 ctgcttccag cacggacaga acttgaaggg aatgtcgtca acgacattgt agagagcttc 1680 ttcatcatat gaagaccagt caatattgtt ttgccagtag ttgtgtcttc cgaggcttct 1740 ggcccaggtt gttttacctg tccgtgttgg gccgacgatg tagaggctgc gttttcttgt 1800 tcctggagca ttctggttgt ttcagccaac cattctaagt cagcttttgc ttgttctagg 1860 cttaagcagc taggttctaa gagcatgtat gctttgggac tgacctggta gatgtttggc 1920 tccagccagt cccggattgt ctcattgcag tggaggtcaa gctctgtggc aggatgagga 1980 ttggtgtagg actctgcgat gtctgggaag aggcgactag ctgagtattc aaagtaagac 2040 agttttgttg cccagtcata gggcagtgaa gtctgcacca gagaaaggta ctcttccttg 2100 ctggtggcat gtgtcatgat ctctctcatg acttcatcct tgctaggctt cttctcagag 2160 ttttccttac ctggaggcac gaaggacttc ttccttggta tgtatgtacc tttctcccac 2220 ttgtccttgg ggtccttcag tatgtagtca cgcaccttgt cagtgctctt ggcgctctgt 2280 atgttgggat ggtaccgatc tatgtcaaag tacctctcat ctctagttgt gactggcttg 2340 atgcattgca ggagagcatg gcagtgccat gtcccatctg tgtgtgtctc tctaactacc 2400 agtatgtagg ctggttcaaa gtccttagtg agcctgaaca gatgctcacc gatgaactct 2460 ggttctagtg gacacttgct gtatgtcagg aaggtgtttg cgttccggtg cctgaagcaa 2520 cggacgctgt gcctgctctc agagctggaa cctacggtgg acatagcgct agaggtgggc 2580 agtctcaggc tcctcctcaa ctctatccct agacagctgc gaaataatcc gcccaccccc 2640 agtgcccttt tatagttgtt tggtgggctg ggccggccgg cccatggggt gtgagcagca 2700 taatatt 2707 //